RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 ANKLE2Q86XL3 938 aa5.86□□□□□ -1.47
GTF3A-208ENST00000493903 PASD1Q8IV76 773 aa5.86□□□□□ -1.47
GTF3A-208ENST00000493903 TRIM59Q8IWR1 403 aa5.86□□□□□ -1.47
GTF3A-208ENST00000493903 GALNT11Q8NCW6 608 aa5.86□□□□□ -1.47
GTF3A-208ENST00000493903 PTPRN2Q92932 1015 aa5.86□□□□□ -1.47
GTF3A-208ENST00000493903 CHMP4CQ96CF2 233 aa5.86□□□□□ -1.47
GTF3A-208ENST00000493903 TTC1Q99614 292 aa5.86□□□□□ -1.47
GTF3A-208ENST00000493903 CARD10Q9BWT7 1032 aa5.86□□□□□ -1.47
GTF3A-208ENST00000493903 CDH19Q9H159 772 aa5.86□□□□□ -1.47
GTF3A-208ENST00000493903 SLC52A2Q9HAB3 445 aa5.86□□□□□ -1.47
GTF3A-208ENST00000493903 RAD18Q9NS91 495 aa5.86□□□□□ -1.47
GTF3A-208ENST00000493903 NDOR1Q9UHB4 597 aa5.86□□□□□ -1.47
GTF3A-208ENST00000493903 USP21Q9UK80 565 aa5.86□□□□□ -1.47
GTF3A-208ENST00000493903 EMC9Q9Y3B6 208 aa5.86□□□□□ -1.47
GTF3A-208ENST00000493903 C9orf172C9J069 976 aa5.85□□□□□ -1.47
GTF3A-208ENST00000493903 DLL1O00548 723 aa5.85□□□□□ -1.47
GTF3A-208ENST00000493903 TMPRSS2O15393 492 aa5.85□□□□□ -1.47
GTF3A-208ENST00000493903 CST3P01034 146 aaPredicted RBP5.85□□□□□ -1.47
GTF3A-208ENST00000493903 IGHA1P01876 353 aa5.85□□□□□ -1.47
GTF3A-208ENST00000493903 APPP05067 770 aa5.85□□□□□ -1.47
GTF3A-208ENST00000493903 MYL1P05976 194 aa5.85□□□□□ -1.47
GTF3A-208ENST00000493903 CD247P20963 164 aa5.85□□□□□ -1.47
GTF3A-208ENST00000493903 NTF4P34130 210 aa5.85□□□□□ -1.47
GTF3A-208ENST00000493903 GRIA2P42262 883 aa5.85□□□□□ -1.47
GTF3A-208ENST00000493903 MAP4K2Q12851 820 aa5.85□□□□□ -1.47
GTF3A-208ENST00000493903 OS9Q13438 667 aaPredicted RBP5.85□□□□□ -1.47
GTF3A-208ENST00000493903 PIN1Q13526 163 aaPredicted RBP5.85□□□□□ -1.47
GTF3A-208ENST00000493903 PCBP1Q15365 356 aaKnown RBP eCLIP5.85□□□□□ -1.47
GTF3A-208ENST00000493903 EXOSC6Q5RKV6 272 aaKnown RBP5.85□□□□□ -1.47
GTF3A-208ENST00000493903 NXNQ6DKJ4 435 aa5.85□□□□□ -1.47
GTF3A-208ENST00000493903 PKN3Q6P5Z2 889 aa5.85□□□□□ -1.47
GTF3A-208ENST00000493903 UBE2R2Q712K3 238 aaPredicted RBP5.85□□□□□ -1.47
GTF3A-208ENST00000493903 CDC37L1Q7L3B6 337 aa5.85□□□□□ -1.47
GTF3A-208ENST00000493903 KIF18BQ86Y91 864 aa5.85□□□□□ -1.47
GTF3A-208ENST00000493903 LENG1Q96BZ8 264 aaPredicted RBP5.85□□□□□ -1.47
GTF3A-208ENST00000493903 FGD4Q96M96 766 aa5.85□□□□□ -1.47
GTF3A-208ENST00000493903 ORAI3Q9BRQ5 295 aa5.85□□□□□ -1.47
GTF3A-208ENST00000493903 MTFR1LQ9H019 292 aa5.85□□□□□ -1.47
GTF3A-208ENST00000493903 ZNF700Q9H0M5 742 aa5.85□□□□□ -1.47
GTF3A-208ENST00000493903 ATXN3LQ9H3M9 355 aa5.85□□□□□ -1.47
GTF3A-208ENST00000493903 ARNT2Q9HBZ2 717 aa5.85□□□□□ -1.47
GTF3A-208ENST00000493903 FAM86C1Q9NVL1 165 aa5.85□□□□□ -1.47
GTF3A-208ENST00000493903 CRIM1Q9NZV1 1036 aa5.85□□□□□ -1.47
GTF3A-208ENST00000493903 ZIM2Q9NZV7 527 aa5.85□□□□□ -1.47
GTF3A-208ENST00000493903 TNPO3Q9Y5L0 923 aaKnown RBP5.85□□□□□ -1.47
GTF3A-208ENST00000493903 COMMD10Q9Y6G5 202 aa5.85□□□□□ -1.47
GTF3A-208ENST00000493903 TTBK1Q5TCY1 1321 aaPredicted RBP5.84□□□□□ -1.47
GTF3A-208ENST00000493903 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.84□□□□□ -1.47
GTF3A-208ENST00000493903 GOLGA6CA6NDK9 693 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 GOLGA6BA6NDN3 693 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 DLX3O60479 287 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 GOLGA6DP0CG33 693 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 ITGA4P13612 1032 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 BPIP17213 487 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 ATF3P18847 181 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 NLRP12P59046 1061 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 RNF4P78317 190 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 MBTPS1Q14703 1052 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 LRRC41Q15345 812 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 DCAF15Q66K64 600 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 IGF2-ASQ6U949 168 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 ZBTB46Q86UZ6 589 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 TCEAL8Q8IYN2 117 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 C7orf61Q8IZ16 206 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 ARHGEF39Q8N4T4 335 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 SAMD3Q8N6K7 520 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 OR2W6PQ8NHA6 318 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 BAHD1Q8TBE0 780 aaPredicted RBP5.84□□□□□ -1.47
GTF3A-208ENST00000493903 ZNF526Q8TF50 670 aaPredicted RBP5.84□□□□□ -1.47
GTF3A-208ENST00000493903 KCTD13Q8WZ19 329 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 USP7Q93009 1102 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 MTMR8Q96EF0 704 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 MAGEB10Q96LZ2 347 aaPredicted RBP5.84□□□□□ -1.47
GTF3A-208ENST00000493903 IFT22Q9H7X7 185 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 FBRSQ9HAH7 460 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 DISC1Q9NRI5 854 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 GOLGA6AQ9NYA3 693 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 APOBEC2Q9Y235 224 aaKnown RBP5.84□□□□□ -1.47
GTF3A-208ENST00000493903 AKT3Q9Y243 479 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 ZNF451Q9Y4E5 1061 aa5.84□□□□□ -1.47
GTF3A-208ENST00000493903 RFPL1O75677 317 aa5.83□□□□□ -1.48
GTF3A-208ENST00000493903 NAT1P18440 290 aa5.83□□□□□ -1.48
GTF3A-208ENST00000493903 HOXC12P31275 282 aa5.83□□□□□ -1.48
GTF3A-208ENST00000493903 CD68P34810 354 aaPredicted RBP5.83□□□□□ -1.48
GTF3A-208ENST00000493903 GATA4P43694 442 aa5.83□□□□□ -1.48
GTF3A-208ENST00000493903 ADGRE1Q14246 886 aa5.83□□□□□ -1.48
GTF3A-208ENST00000493903 SLBPQ14493 270 aaKnown RBP eCLIP5.83□□□□□ -1.48
GTF3A-208ENST00000493903 SEPT7Q16181 437 aaKnown RBP5.83□□□□□ -1.48
GTF3A-208ENST00000493903 NKG7Q16617 165 aa5.83□□□□□ -1.48
GTF3A-208ENST00000493903 FOXD4L6Q3SYB3 417 aaPredicted RBP5.83□□□□□ -1.48
GTF3A-208ENST00000493903 CFAP100Q494V2 611 aa5.83□□□□□ -1.48
GTF3A-208ENST00000493903 FAM102BQ5T8I3 360 aa5.83□□□□□ -1.48
GTF3A-208ENST00000493903 NBPF12Q5TAG4 269 aaPredicted RBP5.83□□□□□ -1.48
GTF3A-208ENST00000493903 FOXD4L3Q6VB84 417 aaPredicted RBP5.83□□□□□ -1.48
GTF3A-208ENST00000493903 FAM9AQ8IZU1 332 aaPredicted RBP5.83□□□□□ -1.48
GTF3A-208ENST00000493903 TTC8Q8TAM2 541 aa5.83□□□□□ -1.48
GTF3A-208ENST00000493903 FBXO41Q8TF61 875 aa5.83□□□□□ -1.48
GTF3A-208ENST00000493903 FANCD2OSQ96PS1 177 aa5.83□□□□□ -1.48
GTF3A-208ENST00000493903 MKRN2Q9H000 416 aaKnown RBP5.83□□□□□ -1.48
GTF3A-208ENST00000493903 GP6Q9HCN6 339 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms