RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 GRM4Q14833 912 aa20.87■□□□□ 0.93
PDLIM7-208ENST00000493815 Q3C1V9 767 aa20.87■□□□□ 0.93
PDLIM7-208ENST00000493815 PRPF38AQ8NAV1 312 aaKnown RBP20.87■□□□□ 0.93
PDLIM7-208ENST00000493815 RLFQ13129 1914 aa20.87■□□□□ 0.93
PDLIM7-208ENST00000493815 DDAH1O94760 285 aa20.86■□□□□ 0.93
PDLIM7-208ENST00000493815 GCLCP48506 637 aaPredicted RBP20.86■□□□□ 0.93
PDLIM7-208ENST00000493815 LBX1P52954 281 aa20.86■□□□□ 0.93
PDLIM7-208ENST00000493815 ASPRV1Q53RT3 343 aa20.86■□□□□ 0.93
PDLIM7-208ENST00000493815 GPATCH4Q5T3I0 446 aaKnown RBP20.86■□□□□ 0.93
PDLIM7-208ENST00000493815 CHURC1Q8WUH1 139 aa20.86■□□□□ 0.93
PDLIM7-208ENST00000493815 ZNF296Q8WUU4 475 aaPredicted RBP20.86■□□□□ 0.93
PDLIM7-208ENST00000493815 AGXT2Q9BYV1 514 aa20.86■□□□□ 0.93
PDLIM7-208ENST00000493815 PRR12Q9ULL5 1215 aa20.86■□□□□ 0.93
PDLIM7-208ENST00000493815 LBX2Q6XYB7 198 aa20.86■□□□□ 0.93
PDLIM7-208ENST00000493815 NOL8Q76FK4 1167 aaKnown RBP20.86■□□□□ 0.93
PDLIM7-208ENST00000493815 FAM160B2Q86V87 743 aa20.86■□□□□ 0.93
PDLIM7-208ENST00000493815 ADAMTS5Q9UNA0 930 aa20.86■□□□□ 0.93
PDLIM7-208ENST00000493815 PALM3A6NDB9 673 aaPredicted RBP20.85■□□□□ 0.93
PDLIM7-208ENST00000493815 KLRF2D3W0D1 207 aa20.85■□□□□ 0.93
PDLIM7-208ENST00000493815 CAP1Q01518 475 aa20.85■□□□□ 0.93
PDLIM7-208ENST00000493815 PLS1Q14651 629 aa20.85■□□□□ 0.93
PDLIM7-208ENST00000493815 TMEM132BQ14DG7 1078 aa20.85■□□□□ 0.93
PDLIM7-208ENST00000493815 SYDE2Q5VT97 1194 aa20.85■□□□□ 0.93
PDLIM7-208ENST00000493815 SYNE3Q6ZMZ3 975 aa20.85■□□□□ 0.93
PDLIM7-208ENST00000493815 NBPF11Q86T75 865 aa20.85■□□□□ 0.93
PDLIM7-208ENST00000493815 CMTR1Q8N1G2 835 aaKnown RBP20.85■□□□□ 0.93
PDLIM7-208ENST00000493815 FBXL16Q8N461 479 aa20.85■□□□□ 0.93
PDLIM7-208ENST00000493815 MYPNQ86TC9 1320 aa20.85■□□□□ 0.93
PDLIM7-208ENST00000493815 GOLGA8BA8MQT2 603 aa20.84■□□□□ 0.93
PDLIM7-208ENST00000493815 ZBTB43O43298 467 aa20.84■□□□□ 0.93
PDLIM7-208ENST00000493815 CTCFP49711 727 aaPredicted RBP20.84■□□□□ 0.93
PDLIM7-208ENST00000493815 AK2P54819 239 aa20.84■□□□□ 0.93
PDLIM7-208ENST00000493815 ERVK-9P63128 1117 aa20.84■□□□□ 0.93
PDLIM7-208ENST00000493815 ERVK-24P63145 666 aa20.84■□□□□ 0.93
PDLIM7-208ENST00000493815 SP3Q02447 781 aa20.84■□□□□ 0.93
PDLIM7-208ENST00000493815 SLC35G1Q2M3R5 365 aa20.84■□□□□ 0.93
PDLIM7-208ENST00000493815 BTNL9Q6UXG8 535 aa20.84■□□□□ 0.93
PDLIM7-208ENST00000493815 CPXCR1Q8N123 301 aa20.84■□□□□ 0.93
PDLIM7-208ENST00000493815 GPRC5AQ8NFJ5 357 aa20.84■□□□□ 0.93
PDLIM7-208ENST00000493815 CTCFLQ8NI51 663 aaPredicted RBP20.84■□□□□ 0.93
PDLIM7-208ENST00000493815 ARHGAP39Q9C0H5 1083 aa20.84■□□□□ 0.93
PDLIM7-208ENST00000493815 VAT1LQ9HCJ6 419 aa20.84■□□□□ 0.93
PDLIM7-208ENST00000493815 RABGAP1Q9Y3P9 1069 aa20.84■□□□□ 0.93
PDLIM7-208ENST00000493815 PARP14Q460N5 1801 aa20.84■□□□□ 0.93
PDLIM7-208ENST00000493815 PLA2G6O60733 806 aa20.83■□□□□ 0.93
PDLIM7-208ENST00000493815 SLC4A3P48751 1232 aa20.83■□□□□ 0.93
PDLIM7-208ENST00000493815 FAM110CQ1W6H9 321 aa20.83■□□□□ 0.93
PDLIM7-208ENST00000493815 CCDC174Q6PII3 467 aa20.83■□□□□ 0.93
PDLIM7-208ENST00000493815 FANCBQ8NB91 859 aa20.83■□□□□ 0.93
PDLIM7-208ENST00000493815 REPS2Q8NFH8 660 aa20.83■□□□□ 0.93
PDLIM7-208ENST00000493815 MORF4L1Q9UBU8 362 aa20.83■□□□□ 0.93
PDLIM7-208ENST00000493815 DHX16O60231 1041 aaKnown RBP20.83■□□□□ 0.92
PDLIM7-208ENST00000493815 PLEKHA8P1O95397 391 aa20.83■□□□□ 0.92
PDLIM7-208ENST00000493815 TAL1P17542 331 aaPredicted RBP20.83■□□□□ 0.92
PDLIM7-208ENST00000493815 CTGFP29279 349 aa20.83■□□□□ 0.92
PDLIM7-208ENST00000493815 ADGRF4Q8IZF3 695 aa20.83■□□□□ 0.92
PDLIM7-208ENST00000493815 CD99L2Q8TCZ2 262 aa20.83■□□□□ 0.92
PDLIM7-208ENST00000493815 GTF3C2Q8WUA4 911 aaPredicted RBP20.83■□□□□ 0.92
PDLIM7-208ENST00000493815 SLC38A10Q9HBR0 1119 aa20.83■□□□□ 0.92
PDLIM7-208ENST00000493815 RAVER2Q9HCJ3 691 aaKnown RBP20.83■□□□□ 0.92
PDLIM7-208ENST00000493815 HPS5Q9UPZ3 1129 aa20.83■□□□□ 0.92
PDLIM7-208ENST00000493815 GOLGA8AA7E2F4 631 aa20.82■□□□□ 0.92
PDLIM7-208ENST00000493815 FKTNO75072 461 aa20.82■□□□□ 0.92
PDLIM7-208ENST00000493815 ZBED4O75132 1171 aa20.82■□□□□ 0.92
PDLIM7-208ENST00000493815 CALM1P0DP23 149 aa20.82■□□□□ 0.92
PDLIM7-208ENST00000493815 CALM2P0DP24 149 aa20.82■□□□□ 0.92
PDLIM7-208ENST00000493815 CALM3P0DP25 149 aa20.82■□□□□ 0.92
PDLIM7-208ENST00000493815 CCDC82Q8N4S0 544 aa20.82■□□□□ 0.92
PDLIM7-208ENST00000493815 MB21D1Q8N884 522 aa20.82■□□□□ 0.92
PDLIM7-208ENST00000493815 PIBF1Q8WXW3 757 aa20.82■□□□□ 0.92
PDLIM7-208ENST00000493815 PORCNQ9H237 461 aa20.82■□□□□ 0.92
PDLIM7-208ENST00000493815 ZNF214Q9UL59 606 aaPredicted RBP20.82■□□□□ 0.92
PDLIM7-208ENST00000493815 CTDP1Q9Y5B0 961 aaPredicted RBP20.82■□□□□ 0.92
PDLIM7-208ENST00000493815 PDIA3P30101 505 aaKnown RBP20.81■□□□□ 0.92
PDLIM7-208ENST00000493815 KIF5BP33176 963 aa20.81■□□□□ 0.92
PDLIM7-208ENST00000493815 LACTBP83111 547 aaPredicted RBP20.81■□□□□ 0.92
PDLIM7-208ENST00000493815 STK3Q13188 491 aa20.81■□□□□ 0.92
PDLIM7-208ENST00000493815 MAP3K14Q99558 947 aa20.81■□□□□ 0.92
PDLIM7-208ENST00000493815 SPATC1LQ9H0A9 340 aa20.81■□□□□ 0.92
PDLIM7-208ENST00000493815 EFCC1Q9HA90 598 aa20.81■□□□□ 0.92
PDLIM7-208ENST00000493815 TPCN1Q9ULQ1 816 aa20.81■□□□□ 0.92
PDLIM7-208ENST00000493815 CYTH3O43739 400 aa20.8■□□□□ 0.92
PDLIM7-208ENST00000493815 CDC27P30260 824 aa20.8■□□□□ 0.92
PDLIM7-208ENST00000493815 METAP2P50579 478 aaKnown RBP eCLIP20.8■□□□□ 0.92
PDLIM7-208ENST00000493815 EVCP57679 992 aa20.8■□□□□ 0.92
PDLIM7-208ENST00000493815 CCT2P78371 535 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-208ENST00000493815 RTN1Q16799 776 aa20.8■□□□□ 0.92
PDLIM7-208ENST00000493815 SRBD1Q8N5C6 995 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-208ENST00000493815 AGBL1Q96MI9 1066 aa20.8■□□□□ 0.92
PDLIM7-208ENST00000493815 MOV10L1Q9BXT6 1211 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-208ENST00000493815 ALDH8A1Q9H2A2 487 aaPredicted RBP20.8■□□□□ 0.92
PDLIM7-208ENST00000493815 JMJD4Q9H9V9 463 aa20.8■□□□□ 0.92
PDLIM7-208ENST00000493815 NCOA5Q9HCD5 579 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-208ENST00000493815 FAM217BQ9NTX9 383 aaPredicted RBP20.8■□□□□ 0.92
PDLIM7-208ENST00000493815 ADD1P35611 737 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-208ENST00000493815 STAT3P40763 770 aa20.8■□□□□ 0.92
PDLIM7-208ENST00000493815 RABEP1Q15276 862 aa20.8■□□□□ 0.92
PDLIM7-208ENST00000493815 NOM1Q5C9Z4 860 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-208ENST00000493815 WDR78Q5VTH9 848 aa20.8■□□□□ 0.92
PDLIM7-208ENST00000493815 SNRNP48Q6IEG0 339 aaKnown RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms