RNA–Protein interactions for RNA: ENST00000493726.1

LRCH3-218, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 733 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-218ENST00000493726 FKBP4Q02790 459 aaKnown RBP eCLIP9.8□□□□□ -0.84
LRCH3-218ENST00000493726 CCDC93Q567U6 631 aa9.8□□□□□ -0.84
LRCH3-218ENST00000493726 XKR5Q6UX68 686 aa9.8□□□□□ -0.84
LRCH3-218ENST00000493726 WDR63Q8IWG1 891 aa9.8□□□□□ -0.84
LRCH3-218ENST00000493726 DZIP1LQ8IYY4 767 aaKnown RBP9.8□□□□□ -0.84
LRCH3-218ENST00000493726 RTKN2Q8IZC4 609 aa9.8□□□□□ -0.84
LRCH3-218ENST00000493726 CACTIN-AS1Q8N1I8 211 aa9.8□□□□□ -0.84
LRCH3-218ENST00000493726 TMEM130Q8N3G9 435 aa9.8□□□□□ -0.84
LRCH3-218ENST00000493726 TTC16Q8NEE8 873 aa9.8□□□□□ -0.84
LRCH3-218ENST00000493726 UTP14AQ9BVJ6 771 aaKnown RBP9.8□□□□□ -0.84
LRCH3-218ENST00000493726 CHMP4AQ9BY43 222 aa9.8□□□□□ -0.84
LRCH3-218ENST00000493726 TAOK3Q9H2K8 898 aa9.8□□□□□ -0.84
LRCH3-218ENST00000493726 CHRDQ9H2X0 955 aa9.8□□□□□ -0.84
LRCH3-218ENST00000493726 COL4A5P29400 1685 aa9.8□□□□□ -0.84
LRCH3-218ENST00000493726 ADAMTSL1Q8N6G6 1762 aa9.79□□□□□ -0.84
LRCH3-218ENST00000493726 TM4SF5O14894 197 aa9.79□□□□□ -0.84
LRCH3-218ENST00000493726 ABL1P00519 1130 aa9.79□□□□□ -0.84
LRCH3-218ENST00000493726 RPLP1P05386 114 aaKnown RBP9.79□□□□□ -0.84
LRCH3-218ENST00000493726 GPTP24298 496 aa9.79□□□□□ -0.84
LRCH3-218ENST00000493726 CD68P34810 354 aaPredicted RBP9.79□□□□□ -0.84
LRCH3-218ENST00000493726 ZNF211Q13398 564 aaPredicted RBP9.79□□□□□ -0.84
LRCH3-218ENST00000493726 PRR23CQ6ZRP0 262 aa9.79□□□□□ -0.84
LRCH3-218ENST00000493726 RTFDC1Q9BY42 306 aaPredicted RBP9.79□□□□□ -0.84
LRCH3-218ENST00000493726 MRS2Q9HD23 443 aa9.79□□□□□ -0.84
LRCH3-218ENST00000493726 CACNA1FO60840 1977 aa9.79□□□□□ -0.84
LRCH3-218ENST00000493726 SCN4AP35499 1836 aa9.78□□□□□ -0.84
LRCH3-218ENST00000493726 FSCN2O14926 492 aa9.78□□□□□ -0.84
LRCH3-218ENST00000493726 DDX3YO15523 660 aaKnown RBP9.78□□□□□ -0.84
LRCH3-218ENST00000493726 PTPRAP18433 802 aa9.78□□□□□ -0.84
LRCH3-218ENST00000493726 FSTL1Q12841 308 aa9.78□□□□□ -0.84
LRCH3-218ENST00000493726 SF3B3Q15393 1217 aaKnown RBP9.78□□□□□ -0.84
LRCH3-218ENST00000493726 ACAD11Q709F0 780 aa9.78□□□□□ -0.84
LRCH3-218ENST00000493726 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.78□□□□□ -0.84
LRCH3-218ENST00000493726 TSPYL6Q8N831 410 aa9.78□□□□□ -0.84
LRCH3-218ENST00000493726 VPS33BQ9H267 617 aa9.78□□□□□ -0.84
LRCH3-218ENST00000493726 DUOX1Q9NRD9 1551 aa9.78□□□□□ -0.84
LRCH3-218ENST00000493726 COL4A1P02462 1669 aa9.77□□□□□ -0.84
LRCH3-218ENST00000493726 FZD9O00144 591 aa9.77□□□□□ -0.85
LRCH3-218ENST00000493726 OLFM4Q6UX06 510 aa9.77□□□□□ -0.85
LRCH3-218ENST00000493726 ATP6V0A2Q9Y487 856 aa9.77□□□□□ -0.85
LRCH3-218ENST00000493726 LAS1LQ9Y4W2 734 aaKnown RBP9.77□□□□□ -0.85
LRCH3-218ENST00000493726 ABCC4O15439 1325 aa9.77□□□□□ -0.85
LRCH3-218ENST00000493726 SH3TC1Q8TE82 1336 aa9.77□□□□□ -0.85
LRCH3-218ENST00000493726 EREGO14944 169 aa9.76□□□□□ -0.85
LRCH3-218ENST00000493726 NPHP1O15259 732 aa9.76□□□□□ -0.85
LRCH3-218ENST00000493726 BBOX1O75936 387 aa9.76□□□□□ -0.85
LRCH3-218ENST00000493726 VEGFAP15692 232 aaPredicted RBP9.76□□□□□ -0.85
LRCH3-218ENST00000493726 AIMP1Q12904 312 aaKnown RBP9.76□□□□□ -0.85
LRCH3-218ENST00000493726 CCDC30Q5VVM6 783 aa9.76□□□□□ -0.85
LRCH3-218ENST00000493726 ALKBH2Q6NS38 261 aa9.76□□□□□ -0.85
LRCH3-218ENST00000493726 SYNE4Q8N205 404 aa9.76□□□□□ -0.85
LRCH3-218ENST00000493726 JMYQ8N9B5 988 aa9.76□□□□□ -0.85
LRCH3-218ENST00000493726 UBASH3BQ8TF42 649 aa9.76□□□□□ -0.85
LRCH3-218ENST00000493726 KLHDC7BQ96G42 594 aa9.76□□□□□ -0.85
LRCH3-218ENST00000493726 RBM17Q96I25 401 aaKnown RBP9.76□□□□□ -0.85
LRCH3-218ENST00000493726 UBL7Q96S82 380 aaPredicted RBP9.76□□□□□ -0.85
LRCH3-218ENST00000493726 ADAM19Q9H013 955 aa9.76□□□□□ -0.85
LRCH3-218ENST00000493726 PHAXQ9H814 394 aaKnown RBP9.76□□□□□ -0.85
LRCH3-218ENST00000493726 DZANK1Q9NVP4 752 aa9.76□□□□□ -0.85
LRCH3-218ENST00000493726 FOXD3Q9UJU5 478 aaPredicted RBP9.76□□□□□ -0.85
LRCH3-218ENST00000493726 FANCIQ9NVI1 1328 aa9.76□□□□□ -0.85
LRCH3-218ENST00000493726 FAM177BA6PVY3 158 aa9.75□□□□□ -0.85
LRCH3-218ENST00000493726 ADAM11O75078 769 aa9.75□□□□□ -0.85
LRCH3-218ENST00000493726 IARSP41252 1262 aaKnown RBP9.75□□□□□ -0.85
LRCH3-218ENST00000493726 ARTNQ5T4W7 220 aa9.75□□□□□ -0.85
LRCH3-218ENST00000493726 FAM117BQ6P1L5 589 aa9.75□□□□□ -0.85
LRCH3-218ENST00000493726 Q6ZS46 218 aa9.75□□□□□ -0.85
LRCH3-218ENST00000493726 TMC4Q7Z404 712 aa9.75□□□□□ -0.85
LRCH3-218ENST00000493726 SP8Q8IXZ3 490 aa9.75□□□□□ -0.85
LRCH3-218ENST00000493726 CCDC191Q8NCU4 936 aa9.75□□□□□ -0.85
LRCH3-218ENST00000493726 FOXD4L4Q8WXT5 416 aaPredicted RBP9.75□□□□□ -0.85
LRCH3-218ENST00000493726 RPGRQ92834 1020 aaKnown RBP9.75□□□□□ -0.85
LRCH3-218ENST00000493726 TSR2Q969E8 191 aaKnown RBP9.75□□□□□ -0.85
LRCH3-218ENST00000493726 METTL22Q9BUU2 404 aaPredicted RBP9.75□□□□□ -0.85
LRCH3-218ENST00000493726 ZFP64Q9NPA5 681 aa9.75□□□□□ -0.85
LRCH3-218ENST00000493726 TRMT112Q9UI30 125 aaKnown RBP9.75□□□□□ -0.85
LRCH3-218ENST00000493726 PDE2AO00408 941 aaPredicted RBP9.74□□□□□ -0.85
LRCH3-218ENST00000493726 FZD6O60353 706 aa9.74□□□□□ -0.85
LRCH3-218ENST00000493726 VAMP4O75379 141 aa9.74□□□□□ -0.85
LRCH3-218ENST00000493726 TNFRSF21O75509 655 aa9.74□□□□□ -0.85
LRCH3-218ENST00000493726 PCCAP05165 728 aaPredicted RBP9.74□□□□□ -0.85
LRCH3-218ENST00000493726 IGKV5-2P06315 115 aa9.74□□□□□ -0.85
LRCH3-218ENST00000493726 NPR3P17342 541 aa9.74□□□□□ -0.85
LRCH3-218ENST00000493726 TWISTNBQ3B726 338 aaPredicted RBP9.74□□□□□ -0.85
LRCH3-218ENST00000493726 SLC51AQ86UW1 340 aa9.74□□□□□ -0.85
LRCH3-218ENST00000493726 ZBTB38Q8NAP3 1195 aaPredicted RBP9.74□□□□□ -0.85
LRCH3-218ENST00000493726 CDHR2Q9BYE9 1310 aa9.74□□□□□ -0.85
LRCH3-218ENST00000493726 RTL9Q8NET4 1388 aa9.74□□□□□ -0.85
LRCH3-218ENST00000493726 FAM13AO94988 1023 aa9.73□□□□□ -0.85
LRCH3-218ENST00000493726 HCLS1P14317 486 aaPredicted RBP9.73□□□□□ -0.85
LRCH3-218ENST00000493726 GRAPQ13588 217 aa9.73□□□□□ -0.85
LRCH3-218ENST00000493726 DUOXA2Q1HG44 320 aa9.73□□□□□ -0.85
LRCH3-218ENST00000493726 HGSNATQ68CP4 663 aa9.73□□□□□ -0.85
LRCH3-218ENST00000493726 KSR2Q6VAB6 950 aa9.73□□□□□ -0.85
LRCH3-218ENST00000493726 KLHL23Q8NBE8 558 aa9.73□□□□□ -0.85
LRCH3-218ENST00000493726 GRAPLQ8TC17 118 aaPredicted RBP9.73□□□□□ -0.85
LRCH3-218ENST00000493726 SLC7A3Q8WY07 619 aa9.73□□□□□ -0.85
LRCH3-218ENST00000493726 SEC31BQ9NQW1 1179 aa9.73□□□□□ -0.85
LRCH3-218ENST00000493726 ZNF277Q9NRM2 450 aaPredicted RBP9.73□□□□□ -0.85
LRCH3-218ENST00000493726 TAF1P21675 1872 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms