RNA–Protein interactions for RNA: ENST00000493619.1

RTN4IP1-202, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 3

Gene RTN4IP1, Length 208 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-202ENST00000493619 ATP2B2Q01814 1243 aa6.91□□□□□ -1.3
RTN4IP1-202ENST00000493619 RAB3GAP1Q15042 981 aa6.91□□□□□ -1.3
RTN4IP1-202ENST00000493619 LRIT3Q3SXY7 679 aa6.91□□□□□ -1.3
RTN4IP1-202ENST00000493619 TMCO4Q5TGY1 634 aa6.91□□□□□ -1.3
RTN4IP1-202ENST00000493619 PI16Q6UXB8 463 aa6.91□□□□□ -1.3
RTN4IP1-202ENST00000493619 C16orf86Q6ZW13 317 aa6.91□□□□□ -1.3
RTN4IP1-202ENST00000493619 RETREG2Q8NC44 543 aa6.91□□□□□ -1.3
RTN4IP1-202ENST00000493619 REPIN1Q9BWE0 567 aaKnown RBP6.91□□□□□ -1.3
RTN4IP1-202ENST00000493619 CCDC8Q9H0W5 538 aaPredicted RBP6.91□□□□□ -1.3
RTN4IP1-202ENST00000493619 UNC93B1Q9H1C4 597 aa6.91□□□□□ -1.3
RTN4IP1-202ENST00000493619 DNAJC18Q9H819 358 aa6.91□□□□□ -1.3
RTN4IP1-202ENST00000493619 VCPKMTQ9H867 229 aa6.91□□□□□ -1.3
RTN4IP1-202ENST00000493619 DCP1AQ9NPI6 582 aaPredicted RBP6.91□□□□□ -1.3
RTN4IP1-202ENST00000493619 PIH1D3Q9NQM4 214 aaKnown RBP6.91□□□□□ -1.3
RTN4IP1-202ENST00000493619 ECHDC1Q9NTX5 307 aa6.91□□□□□ -1.3
RTN4IP1-202ENST00000493619 GABRQQ9UN88 632 aa6.91□□□□□ -1.3
RTN4IP1-202ENST00000493619 EXOC6BQ9Y2D4 811 aa6.91□□□□□ -1.3
RTN4IP1-202ENST00000493619 MROH7Q68CQ1 1323 aa6.91□□□□□ -1.3
RTN4IP1-202ENST00000493619 TMEM265A0A087WTH1 108 aa6.9□□□□□ -1.3
RTN4IP1-202ENST00000493619 TCRBV5S4A2TA0A5A2 114 aa6.9□□□□□ -1.3
RTN4IP1-202ENST00000493619 KBTBD13C9JR72 458 aa6.9□□□□□ -1.3
RTN4IP1-202ENST00000493619 H0YGN5 161 aa6.9□□□□□ -1.3
RTN4IP1-202ENST00000493619 FCER1AP12319 257 aa6.9□□□□□ -1.3
RTN4IP1-202ENST00000493619 CTGFP29279 349 aa6.9□□□□□ -1.3
RTN4IP1-202ENST00000493619 SHMT1P34896 483 aa6.9□□□□□ -1.3
RTN4IP1-202ENST00000493619 FXR1P51114 621 aaKnown RBP eCLIP6.9□□□□□ -1.3
RTN4IP1-202ENST00000493619 ICA1Q05084 483 aa6.9□□□□□ -1.3
RTN4IP1-202ENST00000493619 PDE4BQ07343 736 aa6.9□□□□□ -1.3
RTN4IP1-202ENST00000493619 MTFR1Q15390 333 aa6.9□□□□□ -1.3
RTN4IP1-202ENST00000493619 C12orf60Q5U649 245 aa6.9□□□□□ -1.3
RTN4IP1-202ENST00000493619 FAM109BQ6ICB4 259 aaPredicted RBP6.9□□□□□ -1.3
RTN4IP1-202ENST00000493619 DPP9Q86TI2 863 aa6.9□□□□□ -1.3
RTN4IP1-202ENST00000493619 KBTBD3Q8NAB2 608 aa6.9□□□□□ -1.3
RTN4IP1-202ENST00000493619 APPBP2Q92624 585 aa6.9□□□□□ -1.3
RTN4IP1-202ENST00000493619 MPHOSPH6Q99547 160 aaKnown RBP6.9□□□□□ -1.3
RTN4IP1-202ENST00000493619 P2RX7Q99572 595 aaKnown RBP6.9□□□□□ -1.3
RTN4IP1-202ENST00000493619 SPATC1LQ9H0A9 340 aa6.9□□□□□ -1.3
RTN4IP1-202ENST00000493619 PRO3102Q9H379 93 aa6.9□□□□□ -1.3
RTN4IP1-202ENST00000493619 SNRKQ9NRH2 765 aa6.9□□□□□ -1.3
RTN4IP1-202ENST00000493619 NYAP2Q9P242 653 aa6.9□□□□□ -1.3
RTN4IP1-202ENST00000493619 RBPJLQ9UBG7 517 aa6.9□□□□□ -1.3
RTN4IP1-202ENST00000493619 ZNF532Q9HCE3 1301 aa6.9□□□□□ -1.3
RTN4IP1-202ENST00000493619 PLIN4Q96Q06 1357 aa6.9□□□□□ -1.31
RTN4IP1-202ENST00000493619 GOLIM4O00461 696 aa6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 SEPT4O43236 478 aa6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 PLA2G6O60733 806 aa6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 COL6A1P12109 1028 aa6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 RLBP1P12271 317 aa6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 ELNP15502 786 aa6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 KCTD2Q14681 263 aa6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 TKFCQ3LXA3 575 aa6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 CCDC178Q5BJE1 867 aa6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 ADGRA1Q86SQ6 560 aa6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 RNF180Q86T96 592 aa6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 MIGA1Q8NAN2 632 aa6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 PRPF38AQ8NAV1 312 aaKnown RBP6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 TRIB2Q92519 343 aa6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 DDX12PQ92771 950 aa6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 LBHD1Q9BQE6 289 aaPredicted RBP6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 TSEN34Q9BSV6 310 aaKnown RBP6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 TEX13BQ9BXU2 312 aa6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 GZF1Q9H116 711 aaPredicted RBP6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 RPAP3Q9H6T3 665 aaPredicted RBP6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 DCTPP1Q9H773 170 aa6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 MKNK2Q9HBH9 465 aa6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 SPC25Q9HBM1 224 aa6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 DDX20Q9UHI6 824 aaKnown RBP6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 ADAMTS5Q9UNA0 930 aa6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 MTMR7Q9Y216 660 aa6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 CTDP1Q9Y5B0 961 aaPredicted RBP6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 SYNGAP1Q96PV0 1343 aa6.89□□□□□ -1.31
RTN4IP1-202ENST00000493619 PLXNB2O15031 1838 aa6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 ZMYM6O95789 1325 aa6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 MOXD2PA6NHM9 499 aa6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 TRIM6-TRIM34B2RNG4 842 aa6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 B4DLN1 442 aa6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 MPHOSPH10O00566 681 aaKnown RBP6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 FLOT1O75955 427 aa6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 GDF11O95390 407 aa6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 MRPL12P52815 198 aaKnown RBP6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 CAP1Q01518 475 aa6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 KCNC4Q03721 635 aa6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 TRAF1Q13077 416 aa6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 CCDC129Q6ZRS4 1044 aa6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 FAM160B2Q86V87 743 aa6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 RIOX2Q8IUF8 465 aa6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 TDHQ8IZJ6 230 aa6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 ZNF444Q8N0Y2 327 aaPredicted RBP6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 GMCL1P1Q8NEA9 526 aa6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 CHST13Q8NET6 341 aa6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 CHURC1Q8WUH1 139 aa6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 NUP133Q8WUM0 1156 aa6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 MKL1Q969V6 931 aa6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 PAWRQ96IZ0 340 aaKnown RBP6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 DNAJC2Q99543 621 aaKnown RBP6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 GDF15Q99988 308 aa6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 PAGR1Q9BTK6 254 aa6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 RBM27Q9P2N5 1060 aaKnown RBP6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 SEPT9Q9UHD8 586 aaPredicted RBP6.88□□□□□ -1.31
RTN4IP1-202ENST00000493619 SAP30BPQ9UHR5 308 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms