RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 TEX13BQ9BXU2 312 aa21.35■■□□□ 1.01
PTPRU-207ENST00000492954 C11orf49Q9H6J7 331 aa21.35■■□□□ 1.01
PTPRU-207ENST00000492954 TOMM22Q9NS69 142 aa21.35■■□□□ 1.01
PTPRU-207ENST00000492954 DDX20Q9UHI6 824 aaKnown RBP21.35■■□□□ 1.01
PTPRU-207ENST00000492954 ISY1Q9ULR0 285 aaKnown RBP21.35■■□□□ 1.01
PTPRU-207ENST00000492954 STX8Q9UNK0 236 aa21.35■■□□□ 1.01
PTPRU-207ENST00000492954 NR2E3Q9Y5X4 410 aa21.35■■□□□ 1.01
PTPRU-207ENST00000492954 ZMYM6O95789 1325 aa21.34■■□□□ 1.01
PTPRU-207ENST00000492954 RANBP2P49792 3224 aaKnown RBP21.34■■□□□ 1.01
PTPRU-207ENST00000492954 ZBED4O75132 1171 aa21.34■■□□□ 1.01
PTPRU-207ENST00000492954 PGK2P07205 417 aa21.34■■□□□ 1.01
PTPRU-207ENST00000492954 PDE4AP27815 886 aa21.34■■□□□ 1.01
PTPRU-207ENST00000492954 COPB2P35606 906 aa21.34■■□□□ 1.01
PTPRU-207ENST00000492954 PPP4R3BQ5MIZ7 849 aa21.34■■□□□ 1.01
PTPRU-207ENST00000492954 CWC27Q6UX04 472 aaKnown RBP21.34■■□□□ 1.01
PTPRU-207ENST00000492954 CPXCR1Q8N123 301 aa21.34■■□□□ 1.01
PTPRU-207ENST00000492954 MAML3Q96JK9 1138 aa21.34■■□□□ 1.01
PTPRU-207ENST00000492954 DIAPH3Q9NSV4 1193 aa21.34■■□□□ 1.01
PTPRU-207ENST00000492954 COLQQ9Y215 455 aaPredicted RBP21.34■■□□□ 1.01
PTPRU-207ENST00000492954 RIPK3Q9Y572 518 aa21.34■■□□□ 1.01
PTPRU-207ENST00000492954 CTDP1Q9Y5B0 961 aaPredicted RBP21.34■■□□□ 1.01
PTPRU-207ENST00000492954 PFASO15067 1338 aa21.33■■□□□ 1.01
PTPRU-207ENST00000492954 MCCP23508 829 aa21.33■■□□□ 1.01
PTPRU-207ENST00000492954 SLC4A3P48751 1232 aa21.33■■□□□ 1.01
PTPRU-207ENST00000492954 MFAP1P55081 439 aaKnown RBP21.33■■□□□ 1.01
PTPRU-207ENST00000492954 KCTD2Q14681 263 aa21.33■■□□□ 1.01
PTPRU-207ENST00000492954 RASGRP2Q7LDG7 609 aa21.33■■□□□ 1.01
PTPRU-207ENST00000492954 GMCL1Q96IK5 515 aa21.33■■□□□ 1.01
PTPRU-207ENST00000492954 SLC38A10Q9HBR0 1119 aa21.33■■□□□ 1.01
PTPRU-207ENST00000492954 RAVER2Q9HCJ3 691 aaKnown RBP21.33■■□□□ 1.01
PTPRU-207ENST00000492954 TMEM232C9JQI7 657 aa21.32■■□□□ 1
PTPRU-207ENST00000492954 ATP2A1O14983 1001 aa21.32■■□□□ 1
PTPRU-207ENST00000492954 PRAMEF19Q5SWL8 479 aa21.32■■□□□ 1
PTPRU-207ENST00000492954 TBC1D10CQ8IV04 446 aa21.32■■□□□ 1
PTPRU-207ENST00000492954 MTMR7Q9Y216 660 aa21.32■■□□□ 1
PTPRU-207ENST00000492954 MSCO60682 206 aa21.31■■□□□ 1
PTPRU-207ENST00000492954 COL6A1P12109 1028 aa21.31■■□□□ 1
PTPRU-207ENST00000492954 SLC1A4P43007 532 aa21.31■■□□□ 1
PTPRU-207ENST00000492954 NOVP48745 357 aa21.31■■□□□ 1
PTPRU-207ENST00000492954 STAT2P52630 851 aa21.31■■□□□ 1
PTPRU-207ENST00000492954 ZNF792Q3KQV3 632 aa21.31■■□□□ 1
PTPRU-207ENST00000492954 CHRDL2Q6WN34 429 aa21.31■■□□□ 1
PTPRU-207ENST00000492954 HIP1O00291 1037 aa21.3■■□□□ 1
PTPRU-207ENST00000492954 IKQ13123 557 aaPredicted RBP21.3■■□□□ 1
PTPRU-207ENST00000492954 ANO1Q5XXA6 986 aa21.3■■□□□ 1
PTPRU-207ENST00000492954 KCTD1Q719H9 257 aa21.3■■□□□ 1
PTPRU-207ENST00000492954 FAM160B2Q86V87 743 aa21.3■■□□□ 1
PTPRU-207ENST00000492954 C7orf61Q8IZ16 206 aa21.3■■□□□ 1
PTPRU-207ENST00000492954 STAG1Q8WVM7 1258 aa21.3■■□□□ 1
PTPRU-207ENST00000492954 AKNAD1Q5T1N1 836 aa21.29■■□□□ 1
PTPRU-207ENST00000492954 MFSD6Q6ZSS7 791 aa21.29■■□□□ 1
PTPRU-207ENST00000492954 CHURC1Q8WUH1 139 aa21.29■■□□□ 1
PTPRU-207ENST00000492954 DIS3Q9Y2L1 958 aaKnown RBP21.29■■□□□ 1
PTPRU-207ENST00000492954 TRIOBPQ9H2D6 2365 aa21.29■■□□□ 1
PTPRU-207ENST00000492954 ALPK3Q96L96 1907 aa21.28■■□□□ 1
PTPRU-207ENST00000492954 SEPT4O43236 478 aa21.28■■□□□ 1
PTPRU-207ENST00000492954 GSPT1P15170 499 aaKnown RBP21.28■■□□□ 1
PTPRU-207ENST00000492954 OAZ1P54368 228 aa21.28■■□□□ 1
PTPRU-207ENST00000492954 TTC22Q5TAA0 569 aa21.28■■□□□ 1
PTPRU-207ENST00000492954 RCSD1Q6JBY9 416 aa21.28■■□□□ 1
PTPRU-207ENST00000492954 TINF2Q9BSI4 451 aa21.28■■□□□ 1
PTPRU-207ENST00000492954 TCP11L1Q9NUJ3 509 aa21.28■■□□□ 1
PTPRU-207ENST00000492954 NEDD4P46934 1319 aa21.28■■□□□ 1
PTPRU-207ENST00000492954 DNAJC25-GNG10A0A024R161 153 aa21.27■■□□□ 1
PTPRU-207ENST00000492954 PLA2G6O60733 806 aa21.27■■□□□ 1
PTPRU-207ENST00000492954 FDX1P10109 184 aa21.27■■□□□ 1
PTPRU-207ENST00000492954 PCP11498 1178 aaKnown RBP21.27■■□□□ 1
PTPRU-207ENST00000492954 CCDC96Q2M329 555 aa21.27■■□□□ 1
PTPRU-207ENST00000492954 DDX11Q96FC9 970 aa21.27■■□□□ 1
PTPRU-207ENST00000492954 HOMER2Q9NSB8 354 aa21.27■■□□□ 1
PTPRU-207ENST00000492954 RBM27Q9P2N5 1060 aaKnown RBP21.27■■□□□ 1
PTPRU-207ENST00000492954 FRMPD3Q5JV73 1810 aa21.27■□□□□ 0.99
PTPRU-207ENST00000492954 ZNFX1Q9P2E3 1918 aaKnown RBP21.26■□□□□ 0.99
PTPRU-207ENST00000492954 ZNF213O14771 459 aa21.26■□□□□ 0.99
PTPRU-207ENST00000492954 TOP1P11387 765 aaKnown RBP21.26■□□□□ 0.99
PTPRU-207ENST00000492954 TAL1P17542 331 aaPredicted RBP21.26■□□□□ 0.99
PTPRU-207ENST00000492954 SNAP25P60880 206 aa21.26■□□□□ 0.99
PTPRU-207ENST00000492954 LRRC26Q2I0M4 334 aa21.26■□□□□ 0.99
PTPRU-207ENST00000492954 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.26■□□□□ 0.99
PTPRU-207ENST00000492954 CHST13Q8NET6 341 aa21.26■□□□□ 0.99
PTPRU-207ENST00000492954 DCAF4Q8WV16 495 aa21.26■□□□□ 0.99
PTPRU-207ENST00000492954 TMEM47Q9BQJ4 181 aa21.26■□□□□ 0.99
PTPRU-207ENST00000492954 IL25Q9H293 177 aa21.26■□□□□ 0.99
PTPRU-207ENST00000492954 RNF41Q9H4P4 317 aaPredicted RBP21.26■□□□□ 0.99
PTPRU-207ENST00000492954 ZMYND8Q9ULU4 1186 aaPredicted RBP21.26■□□□□ 0.99
PTPRU-207ENST00000492954 ZNF536O15090 1300 aa21.26■□□□□ 0.99
PTPRU-207ENST00000492954 DNM1LO00429 736 aa21.25■□□□□ 0.99
PTPRU-207ENST00000492954 GJC2Q5T442 439 aaPredicted RBP21.25■□□□□ 0.99
PTPRU-207ENST00000492954 ANKRD35Q8N283 1001 aa21.25■□□□□ 0.99
PTPRU-207ENST00000492954 AGBL1Q96MI9 1066 aa21.25■□□□□ 0.99
PTPRU-207ENST00000492954 DSCC1Q9BVC3 393 aa21.25■□□□□ 0.99
PTPRU-207ENST00000492954 SENP6Q9GZR1 1112 aaPredicted RBP21.25■□□□□ 0.99
PTPRU-207ENST00000492954 PRO3102Q9H379 93 aa21.25■□□□□ 0.99
PTPRU-207ENST00000492954 FBXO40Q9UH90 709 aa21.25■□□□□ 0.99
PTPRU-207ENST00000492954 NRBP1Q9UHY1 535 aa21.25■□□□□ 0.99
PTPRU-207ENST00000492954 PRR12Q9ULL5 1215 aa21.25■□□□□ 0.99
PTPRU-207ENST00000492954 DNAH12Q6ZR08 3092 aa21.24■□□□□ 0.99
PTPRU-207ENST00000492954 TTBK2Q6IQ55 1244 aa21.24■□□□□ 0.99
PTPRU-207ENST00000492954 CCDC174Q6PII3 467 aa21.24■□□□□ 0.99
PTPRU-207ENST00000492954 ESR2Q92731 530 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms