RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-222ENST00000492423 MTMR8Q96EF0 704 aa17.23■□□□□ 0.35
COPS7B-222ENST00000492423 COL11A1P12107 1806 aaPredicted RBP17.23■□□□□ 0.35
COPS7B-222ENST00000492423 BMP3P12645 472 aa17.22■□□□□ 0.35
COPS7B-222ENST00000492423 SCG2P13521 617 aa17.22■□□□□ 0.35
COPS7B-222ENST00000492423 BTNL9Q6UXG8 535 aa17.22■□□□□ 0.35
COPS7B-222ENST00000492423 SPICE1Q8N0Z3 855 aa17.22■□□□□ 0.35
COPS7B-222ENST00000492423 PIBF1Q8WXW3 757 aa17.22■□□□□ 0.35
COPS7B-222ENST00000492423 FEZ1Q99689 392 aa17.22■□□□□ 0.35
COPS7B-222ENST00000492423 JMJD4Q9H9V9 463 aa17.22■□□□□ 0.35
COPS7B-222ENST00000492423 AS3MTQ9HBK9 375 aa17.22■□□□□ 0.35
COPS7B-222ENST00000492423 SLC16A2P36021 539 aa17.21■□□□□ 0.35
COPS7B-222ENST00000492423 DGKZQ13574 1117 aa17.21■□□□□ 0.35
COPS7B-222ENST00000492423 MTMR2Q13614 643 aa17.21■□□□□ 0.35
COPS7B-222ENST00000492423 FAM83BQ5T0W9 1011 aa17.21■□□□□ 0.35
COPS7B-222ENST00000492423 CLEC17AQ6ZS10 378 aa17.21■□□□□ 0.35
COPS7B-222ENST00000492423 FERMT3Q86UX7 667 aa17.21■□□□□ 0.35
COPS7B-222ENST00000492423 ADGRF4Q8IZF3 695 aa17.21■□□□□ 0.35
COPS7B-222ENST00000492423 ZNF280CQ8ND82 737 aa17.21■□□□□ 0.35
COPS7B-222ENST00000492423 CHAMP1Q96JM3 812 aa17.21■□□□□ 0.35
COPS7B-222ENST00000492423 PIGSQ96S52 555 aa17.21■□□□□ 0.35
COPS7B-222ENST00000492423 VPS54Q9P1Q0 977 aa17.21■□□□□ 0.35
COPS7B-222ENST00000492423 SMCHD1A6NHR9 2005 aa17.21■□□□□ 0.35
COPS7B-222ENST00000492423 RBBP6Q7Z6E9 1792 aaKnown RBP17.2■□□□□ 0.34
COPS7B-222ENST00000492423 KIF28PB7ZC32 967 aa17.2■□□□□ 0.34
COPS7B-222ENST00000492423 USP17L10C9JJH3 530 aa17.2■□□□□ 0.34
COPS7B-222ENST00000492423 TMEM232C9JQI7 657 aa17.2■□□□□ 0.34
COPS7B-222ENST00000492423 SPP2Q13103 211 aa17.2■□□□□ 0.34
COPS7B-222ENST00000492423 WWC2Q6AWC2 1192 aa17.2■□□□□ 0.34
COPS7B-222ENST00000492423 ANKRD13AQ8IZ07 590 aa17.2■□□□□ 0.34
COPS7B-222ENST00000492423 GPKOWQ92917 476 aaPredicted RBP eCLIP17.2■□□□□ 0.34
COPS7B-222ENST00000492423 RRP36Q96EU6 259 aaKnown RBP17.2■□□□□ 0.34
COPS7B-222ENST00000492423 CLMNQ96JQ2 1002 aa17.2■□□□□ 0.34
COPS7B-222ENST00000492423 C12orf42Q96LP6 360 aa17.2■□□□□ 0.34
COPS7B-222ENST00000492423 VAT1LQ9HCJ6 419 aa17.2■□□□□ 0.34
COPS7B-222ENST00000492423 EMILIN3Q9NT22 766 aa17.2■□□□□ 0.34
COPS7B-222ENST00000492423 KCNJ14Q9UNX9 436 aa17.2■□□□□ 0.34
COPS7B-222ENST00000492423 AFG3L2Q9Y4W6 797 aa17.2■□□□□ 0.34
COPS7B-222ENST00000492423 CSADQ9Y600 493 aa17.2■□□□□ 0.34
COPS7B-222ENST00000492423 ZHX2Q9Y6X8 837 aa17.2■□□□□ 0.34
COPS7B-222ENST00000492423 A0A0G2JMZ2 1700 aa17.2■□□□□ 0.34
COPS7B-222ENST00000492423 STXBP3O00186 592 aa17.19■□□□□ 0.34
COPS7B-222ENST00000492423 WDR46O15213 610 aaKnown RBP17.19■□□□□ 0.34
COPS7B-222ENST00000492423 BAG4O95429 457 aaKnown RBP17.19■□□□□ 0.34
COPS7B-222ENST00000492423 MMP1P03956 469 aa17.19■□□□□ 0.34
COPS7B-222ENST00000492423 HSPA6P17066 643 aa17.19■□□□□ 0.34
COPS7B-222ENST00000492423 BACE1P56817 501 aa17.19■□□□□ 0.34
COPS7B-222ENST00000492423 KIF23Q02241 960 aaPredicted RBP17.19■□□□□ 0.34
COPS7B-222ENST00000492423 TTLL12Q14166 644 aaPredicted RBP17.19■□□□□ 0.34
COPS7B-222ENST00000492423 NPY5RQ15761 445 aa17.19■□□□□ 0.34
COPS7B-222ENST00000492423 LDLRAD1Q5T700 205 aa17.19■□□□□ 0.34
COPS7B-222ENST00000492423 SYDE2Q5VT97 1194 aa17.19■□□□□ 0.34
COPS7B-222ENST00000492423 TYW1BQ6NUM6 668 aa17.19■□□□□ 0.34
COPS7B-222ENST00000492423 ARMC9Q7Z3E5 817 aa17.19■□□□□ 0.34
COPS7B-222ENST00000492423 HOMER1Q86YM7 354 aa17.19■□□□□ 0.34
COPS7B-222ENST00000492423 LPAR1Q92633 364 aa17.19■□□□□ 0.34
COPS7B-222ENST00000492423 PHF20Q9BVI0 1012 aa17.19■□□□□ 0.34
COPS7B-222ENST00000492423 ELP3Q9H9T3 547 aa17.19■□□□□ 0.34
COPS7B-222ENST00000492423 ISY1Q9ULR0 285 aaKnown RBP17.19■□□□□ 0.34
COPS7B-222ENST00000492423 TRIM75PA6NK02 468 aa17.18■□□□□ 0.34
COPS7B-222ENST00000492423 KIF3CO14782 793 aa17.18■□□□□ 0.34
COPS7B-222ENST00000492423 PLA2G6O60733 806 aa17.18■□□□□ 0.34
COPS7B-222ENST00000492423 PPP1R11O60927 126 aaPredicted RBP17.18■□□□□ 0.34
COPS7B-222ENST00000492423 USP14P54578 494 aa17.18■□□□□ 0.34
COPS7B-222ENST00000492423 TRIM29Q14134 588 aa17.18■□□□□ 0.34
COPS7B-222ENST00000492423 CEP350Q5VT06 3117 aa17.17■□□□□ 0.34
COPS7B-222ENST00000492423 SPDYE5A6NIY4 337 aa17.17■□□□□ 0.34
COPS7B-222ENST00000492423 C19orf81C9J6K1 198 aa17.17■□□□□ 0.34
COPS7B-222ENST00000492423 ITGBL1O95965 494 aaPredicted RBP17.17■□□□□ 0.34
COPS7B-222ENST00000492423 VCAM1P19320 739 aa17.17■□□□□ 0.34
COPS7B-222ENST00000492423 CDC37Q16543 378 aaPredicted RBP17.17■□□□□ 0.34
COPS7B-222ENST00000492423 QRICH1Q2TAL8 776 aa17.17■□□□□ 0.34
COPS7B-222ENST00000492423 SH3D19Q5HYK7 790 aa17.17■□□□□ 0.34
COPS7B-222ENST00000492423 MCTP1Q6DN14 999 aa17.17■□□□□ 0.34
COPS7B-222ENST00000492423 FAM173BQ6P4H8 233 aa17.17■□□□□ 0.34
COPS7B-222ENST00000492423 ERO1BQ86YB8 467 aa17.17■□□□□ 0.34
COPS7B-222ENST00000492423 ZSCAN16Q9H4T2 348 aaPredicted RBP17.17■□□□□ 0.34
COPS7B-222ENST00000492423 ZNF408Q9H9D4 720 aa17.17■□□□□ 0.34
COPS7B-222ENST00000492423 SH3GLB2Q9NR46 395 aa17.17■□□□□ 0.34
COPS7B-222ENST00000492423 BARHL2Q9NY43 387 aa17.17■□□□□ 0.34
COPS7B-222ENST00000492423 SEC63Q9UGP8 760 aaKnown RBP17.17■□□□□ 0.34
COPS7B-222ENST00000492423 PRR12Q9ULL5 1215 aa17.17■□□□□ 0.34
COPS7B-222ENST00000492423 PNMA6FA0A0J9YX94 578 aa17.16■□□□□ 0.34
COPS7B-222ENST00000492423 hCG_1984214I3L0E3 225 aa17.16■□□□□ 0.34
COPS7B-222ENST00000492423 ZBTB5O15062 677 aa17.16■□□□□ 0.34
COPS7B-222ENST00000492423 XBP1P17861 261 aa17.16■□□□□ 0.34
COPS7B-222ENST00000492423 STAT2P52630 851 aa17.16■□□□□ 0.34
COPS7B-222ENST00000492423 HMGCS2P54868 508 aa17.16■□□□□ 0.34
COPS7B-222ENST00000492423 PPATQ06203 517 aa17.16■□□□□ 0.34
COPS7B-222ENST00000492423 HEATR3Q7Z4Q2 680 aa17.16■□□□□ 0.34
COPS7B-222ENST00000492423 FAM160B2Q86V87 743 aa17.16■□□□□ 0.34
COPS7B-222ENST00000492423 DIS3L2Q8IYB7 885 aaKnown RBP17.16■□□□□ 0.34
COPS7B-222ENST00000492423 ZNF713Q8N859 430 aaPredicted RBP17.16■□□□□ 0.34
COPS7B-222ENST00000492423 OXER1Q8TDS5 423 aa17.16■□□□□ 0.34
COPS7B-222ENST00000492423 GBP4Q96PP9 640 aa17.16■□□□□ 0.34
COPS7B-222ENST00000492423 GBA2Q9HCG7 927 aaPredicted RBP17.16■□□□□ 0.34
COPS7B-222ENST00000492423 FBXO28Q9NVF7 368 aa17.16■□□□□ 0.34
COPS7B-222ENST00000492423 FEM1BQ9UK73 627 aa17.16■□□□□ 0.34
COPS7B-222ENST00000492423 ADAMTS3O15072 1205 aa17.15■□□□□ 0.34
COPS7B-222ENST00000492423 U2AF2P26368 475 aaKnown RBP eCLIP17.15■□□□□ 0.34
COPS7B-222ENST00000492423 FKBP1BP68106 108 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms