RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 CNPY2Q9Y2B0 182 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 ITGB4P16144 1822 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 CRYBG1Q9Y4K1 1723 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 TCRBV5S4A2TA0A5A2 114 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 VWA3AA6NCI4 1184 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 USP17L15C9J2P7 530 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 USP17L13C9JLJ4 530 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 USP17L11C9JVI0 530 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 USP17L18D6R9N7 530 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 USP17L22D6RA61 530 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 USP17L17D6RBQ6 530 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 USP17L19D6RCP7 530 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 USP17L20D6RJB6 530 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 TNPO2O14787 897 aaKnown RBP5.09□□□□□ -1.59
TRA2B-215ENST00000492417 CTNND1O60716 968 aaKnown RBP5.09□□□□□ -1.59
TRA2B-215ENST00000492417 ZSCAN22P10073 491 aaPredicted RBP5.09□□□□□ -1.59
TRA2B-215ENST00000492417 CYP2B6P20813 491 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 AFMP43652 599 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 USP17L24Q0WX57 530 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 ALX1Q15699 326 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 ASPRV1Q53RT3 343 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 PRR16Q569H4 304 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 KLHL10Q6JEL2 608 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 CYP4F22Q6NT55 531 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 USP17L6PQ6QN14 398 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 C16orf86Q6ZW13 317 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 LDHDQ86WU2 507 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 SCYL3Q8IZE3 742 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 FSIP1Q8NA03 581 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 PRDM10Q9NQV6 1147 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 HOXC10Q9NYD6 342 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 CPA4Q9UI42 421 aa5.09□□□□□ -1.59
TRA2B-215ENST00000492417 FZD9O00144 591 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 BIN1O00499 593 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 DDAH1O94760 285 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 TAL1P17542 331 aaPredicted RBP5.08□□□□□ -1.6
TRA2B-215ENST00000492417 DEFB115Q30KQ5 88 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 TAF3Q5VWG9 929 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 C15orf52Q6ZUT6 534 aaKnown RBP5.08□□□□□ -1.6
TRA2B-215ENST00000492417 CEP57L1Q8IYX8 460 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 MNS1Q8NEH6 495 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 TNPO1Q92973 898 aaKnown RBP5.08□□□□□ -1.6
TRA2B-215ENST00000492417 ATG4CQ96DT6 458 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 ZNF274Q96GC6 653 aaPredicted RBP5.08□□□□□ -1.6
TRA2B-215ENST00000492417 LZTS2Q9BRK4 669 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 CYP2C8P10632 490 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 STAT3P40763 770 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 PDE4DQ08499 809 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 VGLL4Q14135 290 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 NONOQ15233 471 aaKnown RBP eCLIP5.08□□□□□ -1.6
TRA2B-215ENST00000492417 RCSD1Q6JBY9 416 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 FASTKD5Q7L8L6 764 aaKnown RBP5.08□□□□□ -1.6
TRA2B-215ENST00000492417 ERO1BQ86YB8 467 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 MB21D2Q8IYB1 491 aaPredicted RBP5.08□□□□□ -1.6
TRA2B-215ENST00000492417 PRPF38AQ8NAV1 312 aaKnown RBP5.08□□□□□ -1.6
TRA2B-215ENST00000492417 GLG1Q92896 1179 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 TTC14Q96N46 770 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 MLXIPQ9HAP2 919 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 RNF146Q9NTX7 359 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 ABCA3Q99758 1704 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 ZMYM6O95789 1325 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 IRF6O14896 467 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 PFKFB2O60825 505 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 CDC27P30260 824 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 RAD51AP2Q09MP3 1159 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 NR5A1Q13285 461 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 COG2Q14746 738 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 SBK1Q52WX2 424 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 HSP90B2PQ58FF3 399 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 UTP14CQ5TAP6 766 aaKnown RBP5.08□□□□□ -1.6
TRA2B-215ENST00000492417 NCAPH2Q6IBW4 605 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 FAM83AQ86UY5 434 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 DHX37Q8IY37 1157 aaKnown RBP5.08□□□□□ -1.6
TRA2B-215ENST00000492417 BBXQ8WY36 941 aaPredicted RBP5.08□□□□□ -1.6
TRA2B-215ENST00000492417 CALML4Q96GE6 196 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 LY9Q9HBG7 655 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 SLC5A4Q9NY91 659 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 SALL1Q9NSC2 1324 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 RPAP1Q9BWH6 1393 aaPredicted RBP5.08□□□□□ -1.6
TRA2B-215ENST00000492417 F13A1P00488 732 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 QRICH1Q2TAL8 776 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 ANO1Q5XXA6 986 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 IFNLR1Q8IU57 520 aaPredicted RBP5.08□□□□□ -1.6
TRA2B-215ENST00000492417 ADGRF4Q8IZF3 695 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 BLIDQ8IZY5 108 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 TRERF1Q96PN7 1200 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 SCAND2PQ9GZW5 306 aaPredicted RBP5.08□□□□□ -1.6
TRA2B-215ENST00000492417 TNMDQ9H2S6 317 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 VCPKMTQ9H867 229 aa5.08□□□□□ -1.6
TRA2B-215ENST00000492417 SALL3Q9BXA9 1300 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 PKD1L3Q7Z443 1732 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 H0YHG0 523 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 ORC4O43929 436 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 SHMT1P34896 483 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 LIFRP42702 1097 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 TOB2Q14106 344 aaPredicted RBP5.07□□□□□ -1.6
TRA2B-215ENST00000492417 Q3C1V9 767 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 FAM160B2Q86V87 743 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 ZSCAN30Q86W11 494 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 BCCIPQ9P287 314 aaKnown RBP eCLIP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms