RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 CENPQQ7L2Z9 268 aaPredicted RBP29.14■■■□□ 2.26
UPF3A-209ENST00000492270 RNF41Q9H4P4 317 aaPredicted RBP29.14■■■□□ 2.26
UPF3A-209ENST00000492270 PCP11498 1178 aaKnown RBP29.13■■■□□ 2.25
UPF3A-209ENST00000492270 CCND3P30281 292 aaPredicted RBP29.13■■■□□ 2.25
UPF3A-209ENST00000492270 SNRNP48Q6IEG0 339 aaKnown RBP29.13■■■□□ 2.25
UPF3A-209ENST00000492270 KCTD1Q719H9 257 aa29.13■■■□□ 2.25
UPF3A-209ENST00000492270 DPP9Q86TI2 863 aa29.13■■■□□ 2.25
UPF3A-209ENST00000492270 TMEM47Q9BQJ4 181 aa29.13■■■□□ 2.25
UPF3A-209ENST00000492270 TCP11L1Q9NUJ3 509 aa29.13■■■□□ 2.25
UPF3A-209ENST00000492270 SMCHD1A6NHR9 2005 aa29.12■■■□□ 2.25
UPF3A-209ENST00000492270 TFRCP02786 760 aaKnown RBP29.12■■■□□ 2.25
UPF3A-209ENST00000492270 UBE2Q1Q7Z7E8 422 aa29.12■■■□□ 2.25
UPF3A-209ENST00000492270 CPXCR1Q8N123 301 aa29.12■■■□□ 2.25
UPF3A-209ENST00000492270 TEX13BQ9BXU2 312 aa29.12■■■□□ 2.25
UPF3A-209ENST00000492270 CRISPLD2Q9H0B8 497 aa29.12■■■□□ 2.25
UPF3A-209ENST00000492270 SLC38A10Q9HBR0 1119 aa29.12■■■□□ 2.25
UPF3A-209ENST00000492270 RIPK3Q9Y572 518 aa29.12■■■□□ 2.25
UPF3A-209ENST00000492270 ALPK3Q96L96 1907 aa29.12■■■□□ 2.25
UPF3A-209ENST00000492270 ZBED4O75132 1171 aa29.11■■■□□ 2.25
UPF3A-209ENST00000492270 FCER1AP12319 257 aa29.11■■■□□ 2.25
UPF3A-209ENST00000492270 SLC4A3P48751 1232 aa29.11■■■□□ 2.25
UPF3A-209ENST00000492270 STAT2P52630 851 aa29.11■■■□□ 2.25
UPF3A-209ENST00000492270 IMMTQ16891 758 aaKnown RBP29.11■■■□□ 2.25
UPF3A-209ENST00000492270 RCSD1Q6JBY9 416 aa29.11■■■□□ 2.25
UPF3A-209ENST00000492270 ABRAQ8N0Z2 381 aa29.11■■■□□ 2.25
UPF3A-209ENST00000492270 ESR2Q92731 530 aa29.11■■■□□ 2.25
UPF3A-209ENST00000492270 ZKSCAN3Q9BRR0 538 aa29.11■■■□□ 2.25
UPF3A-209ENST00000492270 RAVER2Q9HCJ3 691 aaKnown RBP29.11■■■□□ 2.25
UPF3A-209ENST00000492270 FARP2O94887 1054 aaPredicted RBP29.1■■■□□ 2.25
UPF3A-209ENST00000492270 TOP1P11387 765 aaKnown RBP29.1■■■□□ 2.25
UPF3A-209ENST00000492270 CYP2C19P33261 490 aa29.1■■■□□ 2.25
UPF3A-209ENST00000492270 PTH1RQ03431 593 aa29.1■■■□□ 2.25
UPF3A-209ENST00000492270 IKQ13123 557 aaPredicted RBP29.1■■■□□ 2.25
UPF3A-209ENST00000492270 RUFY2Q8WXA3 655 aa29.1■■■□□ 2.25
UPF3A-209ENST00000492270 MMP19Q99542 508 aa29.1■■■□□ 2.25
UPF3A-209ENST00000492270 CTNNA3Q9UI47 895 aa29.1■■■□□ 2.25
UPF3A-209ENST00000492270 KDM4AO75164 1064 aa29.09■■■□□ 2.25
UPF3A-209ENST00000492270 IGHA2P01877 340 aa29.09■■■□□ 2.25
UPF3A-209ENST00000492270 PGK2P07205 417 aa29.09■■■□□ 2.25
UPF3A-209ENST00000492270 MFSD14CQ5VZR4 134 aa29.09■■■□□ 2.25
UPF3A-209ENST00000492270 CTDP1Q9Y5B0 961 aaPredicted RBP29.09■■■□□ 2.25
UPF3A-209ENST00000492270 B4E1Z4 1266 aa29.08■■■□□ 2.25
UPF3A-209ENST00000492270 ATP2A1O14983 1001 aa29.08■■■□□ 2.25
UPF3A-209ENST00000492270 SGSM2O43147 1006 aa29.08■■■□□ 2.25
UPF3A-209ENST00000492270 COPB2P35606 906 aa29.08■■■□□ 2.25
UPF3A-209ENST00000492270 CCDC96Q2M329 555 aa29.08■■■□□ 2.25
UPF3A-209ENST00000492270 FAM160B2Q86V87 743 aa29.08■■■□□ 2.25
UPF3A-209ENST00000492270 MCM3APO60318 1980 aa29.07■■■□□ 2.24
UPF3A-209ENST00000492270 KCTD2Q14681 263 aa29.07■■■□□ 2.24
UPF3A-209ENST00000492270 OLFML2BQ68BL8 750 aa29.07■■■□□ 2.24
UPF3A-209ENST00000492270 CHURC1Q8WUH1 139 aa29.07■■■□□ 2.24
UPF3A-209ENST00000492270 DCAF4Q8WV16 495 aa29.07■■■□□ 2.24
UPF3A-209ENST00000492270 FRMPD2Q68DX3 1309 aaPredicted RBP29.06■■■□□ 2.24
UPF3A-209ENST00000492270 SNAP25P60880 206 aa29.06■■■□□ 2.24
UPF3A-209ENST00000492270 TTBK2Q6IQ55 1244 aa29.06■■■□□ 2.24
UPF3A-209ENST00000492270 TRPV1Q8NER1 839 aa29.06■■■□□ 2.24
UPF3A-209ENST00000492270 DIS3LQ8TF46 1054 aaKnown RBP29.06■■■□□ 2.24
UPF3A-209ENST00000492270 MAML3Q96JK9 1138 aa29.06■■■□□ 2.24
UPF3A-209ENST00000492270 PLA2G6O60733 806 aa29.05■■■□□ 2.24
UPF3A-209ENST00000492270 PRPF38BQ5VTL8 546 aaKnown RBP29.05■■■□□ 2.24
UPF3A-209ENST00000492270 TTC14Q96N46 770 aa29.05■■■□□ 2.24
UPF3A-209ENST00000492270 SLC5A4Q9NY91 659 aa29.05■■■□□ 2.24
UPF3A-209ENST00000492270 PRR12Q9ULL5 1215 aa29.05■■■□□ 2.24
UPF3A-209ENST00000492270 ZNF536O15090 1300 aa29.04■■■□□ 2.24
UPF3A-209ENST00000492270 CYBAP13498 195 aa29.04■■■□□ 2.24
UPF3A-209ENST00000492270 OAZ1P54368 228 aa29.04■■■□□ 2.24
UPF3A-209ENST00000492270 OGDHLQ9ULD0 1010 aa29.04■■■□□ 2.24
UPF3A-209ENST00000492270 LCTP09848 1927 aa29.03■■■□□ 2.24
UPF3A-209ENST00000492270 PDHBP11177 359 aa29.03■■■□□ 2.24
UPF3A-209ENST00000492270 SLC16A2P36021 539 aa29.03■■■□□ 2.24
UPF3A-209ENST00000492270 ZNF792Q3KQV3 632 aa29.03■■■□□ 2.24
UPF3A-209ENST00000492270 LHX8Q68G74 356 aa29.03■■■□□ 2.24
UPF3A-209ENST00000492270 PAWRQ96IZ0 340 aaKnown RBP29.03■■■□□ 2.24
UPF3A-209ENST00000492270 AGBL1Q96MI9 1066 aa29.03■■■□□ 2.24
UPF3A-209ENST00000492270 GPCPD1Q9NPB8 672 aa29.03■■■□□ 2.24
UPF3A-209ENST00000492270 HOMER2Q9NSB8 354 aa29.03■■■□□ 2.24
UPF3A-209ENST00000492270 ZSWIM5Q9P217 1185 aa29.03■■■□□ 2.24
UPF3A-209ENST00000492270 CYP21A2P08686 494 aa29.02■■■□□ 2.24
UPF3A-209ENST00000492270 FDX1P10109 184 aa29.02■■■□□ 2.24
UPF3A-209ENST00000492270 CNGA1P29973 690 aa29.02■■■□□ 2.24
UPF3A-209ENST00000492270 MNX1P50219 401 aaPredicted RBP29.02■■■□□ 2.24
UPF3A-209ENST00000492270 CCDC174Q6PII3 467 aa29.02■■■□□ 2.24
UPF3A-209ENST00000492270 KRT23Q9C075 422 aa29.02■■■□□ 2.24
UPF3A-209ENST00000492270 TAF6LQ9Y6J9 622 aa29.02■■■□□ 2.24
UPF3A-209ENST00000492270 MYH6P13533 1939 aa29.01■■■□□ 2.23
UPF3A-209ENST00000492270 TAL1P17542 331 aaPredicted RBP29.01■■■□□ 2.23
UPF3A-209ENST00000492270 CAPN2P17655 700 aa29.01■■■□□ 2.23
UPF3A-209ENST00000492270 PRAMEF19Q5SWL8 479 aa29.01■■■□□ 2.23
UPF3A-209ENST00000492270 IQCA1Q86XH1 822 aa29.01■■■□□ 2.23
UPF3A-209ENST00000492270 DGKHQ86XP1 1220 aa29.01■■■□□ 2.23
UPF3A-209ENST00000492270 CCDC136Q96JN2 1154 aa29.01■■■□□ 2.23
UPF3A-209ENST00000492270 ZSCAN10Q96SZ4 725 aaPredicted RBP29.01■■■□□ 2.23
UPF3A-209ENST00000492270 CNNM2Q9H8M5 875 aa29.01■■■□□ 2.23
UPF3A-209ENST00000492270 TNKSO95271 1327 aa29■■■□□ 2.23
UPF3A-209ENST00000492270 NT5C2P49902 561 aa29■■■□□ 2.23
UPF3A-209ENST00000492270 BTNL9Q6UXG8 535 aa29■■■□□ 2.23
UPF3A-209ENST00000492270 ENAHQ8N8S7 591 aaPredicted RBP29■■■□□ 2.23
UPF3A-209ENST00000492270 ANKLE1Q8NAG6 615 aa29■■■□□ 2.23
UPF3A-209ENST00000492270 U3KPZ7 1027 aaPredicted RBP29■■■□□ 2.23
UPF3A-209ENST00000492270 SNHG28P0DPA3 235 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms