RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 GTF2F1P35269 517 aaKnown RBP eCLIP6.09□□□□□ -1.43
VTA1-204ENST00000491881 PDE6BP35913 854 aa6.09□□□□□ -1.43
VTA1-204ENST00000491881 TIGD5Q53EQ6 642 aa6.09□□□□□ -1.43
VTA1-204ENST00000491881 ZNF385BQ569K4 471 aa6.09□□□□□ -1.43
VTA1-204ENST00000491881 SLC6A19Q695T7 634 aa6.09□□□□□ -1.43
VTA1-204ENST00000491881 OVOS1Q6IE37 1185 aa6.09□□□□□ -1.43
VTA1-204ENST00000491881 MCATQ8IVS2 390 aaKnown RBP6.09□□□□□ -1.43
VTA1-204ENST00000491881 PHACTR4Q8IZ21 702 aa6.09□□□□□ -1.43
VTA1-204ENST00000491881 OR6P1Q8NGX9 317 aa6.09□□□□□ -1.43
VTA1-204ENST00000491881 INTS4Q96HW7 963 aaKnown RBP6.09□□□□□ -1.43
VTA1-204ENST00000491881 KRTAP17-1Q9BYP8 105 aa6.09□□□□□ -1.43
VTA1-204ENST00000491881 MRVI1Q9Y6F6 885 aa6.09□□□□□ -1.43
VTA1-204ENST00000491881 A0A0G2JLL6 359 aaPredicted RBP6.08□□□□□ -1.44
VTA1-204ENST00000491881 MEIS3P2A8K0S8 358 aa6.08□□□□□ -1.44
VTA1-204ENST00000491881 RFXAPO00287 272 aa6.08□□□□□ -1.44
VTA1-204ENST00000491881 STK10O94804 968 aaKnown RBP6.08□□□□□ -1.44
VTA1-204ENST00000491881 RAG1P15918 1043 aa6.08□□□□□ -1.44
VTA1-204ENST00000491881 TSPYL5Q86VY4 417 aaPredicted RBP6.08□□□□□ -1.44
VTA1-204ENST00000491881 ANTXR1Q9H6X2 564 aa6.08□□□□□ -1.44
VTA1-204ENST00000491881 KCNH3Q9ULD8 1083 aa6.08□□□□□ -1.44
VTA1-204ENST00000491881 YBX2Q9Y2T7 364 aaKnown RBP6.08□□□□□ -1.44
VTA1-204ENST00000491881 TEX51A0A1B0GUA7 166 aa6.07□□□□□ -1.44
VTA1-204ENST00000491881 SLC22A31A6NKX4 558 aa6.07□□□□□ -1.44
VTA1-204ENST00000491881 CHURC1-FNTBB4DL54 471 aa6.07□□□□□ -1.44
VTA1-204ENST00000491881 DNAJA2O60884 412 aa6.07□□□□□ -1.44
VTA1-204ENST00000491881 SYN1P17600 705 aa6.07□□□□□ -1.44
VTA1-204ENST00000491881 GIPRP48546 466 aa6.07□□□□□ -1.44
VTA1-204ENST00000491881 CHMP4BP1P59074 171 aa6.07□□□□□ -1.44
VTA1-204ENST00000491881 NFIXQ14938 502 aa6.07□□□□□ -1.44
VTA1-204ENST00000491881 NR0B2Q15466 257 aa6.07□□□□□ -1.44
VTA1-204ENST00000491881 ARSHQ5FYA8 562 aa6.07□□□□□ -1.44
VTA1-204ENST00000491881 NLRC3Q7RTR2 1065 aa6.07□□□□□ -1.44
VTA1-204ENST00000491881 LSRQ86X29 649 aaPredicted RBP6.07□□□□□ -1.44
VTA1-204ENST00000491881 SPPL2CQ8IUH8 684 aa6.07□□□□□ -1.44
VTA1-204ENST00000491881 SLFN12Q8IYM2 578 aa6.07□□□□□ -1.44
VTA1-204ENST00000491881 RBBP8NLQ8NC74 664 aaPredicted RBP6.07□□□□□ -1.44
VTA1-204ENST00000491881 DNAJB8Q8NHS0 232 aa6.07□□□□□ -1.44
VTA1-204ENST00000491881 SHDQ96IW2 340 aa6.07□□□□□ -1.44
VTA1-204ENST00000491881 KCNC2Q96PR1 638 aa6.07□□□□□ -1.44
VTA1-204ENST00000491881 TM9SF2Q99805 663 aa6.07□□□□□ -1.44
VTA1-204ENST00000491881 SGPP1Q9BX95 441 aa6.07□□□□□ -1.44
VTA1-204ENST00000491881 GPR62Q9BZJ7 368 aa6.07□□□□□ -1.44
VTA1-204ENST00000491881 ZNF552Q9H707 407 aaPredicted RBP6.07□□□□□ -1.44
VTA1-204ENST00000491881 ZNF408Q9H9D4 720 aa6.07□□□□□ -1.44
VTA1-204ENST00000491881 GPR160Q9UJ42 338 aa6.07□□□□□ -1.44
VTA1-204ENST00000491881 CEP131Q9UPN4 1083 aa6.07□□□□□ -1.44
VTA1-204ENST00000491881 R3HCC1Q9Y3T6 440 aaKnown RBP6.07□□□□□ -1.44
VTA1-204ENST00000491881 KCTD3Q9Y597 815 aa6.07□□□□□ -1.44
VTA1-204ENST00000491881 UPK3BL1B0FP48 263 aa6.06□□□□□ -1.44
VTA1-204ENST00000491881 UPK3BL2E5RIL1 263 aa6.06□□□□□ -1.44
VTA1-204ENST00000491881 TNNI3KQ59H18 835 aa6.06□□□□□ -1.44
VTA1-204ENST00000491881 TMEM151BQ8IW70 566 aa6.06□□□□□ -1.44
VTA1-204ENST00000491881 MARCH10Q8NA82 808 aaPredicted RBP6.06□□□□□ -1.44
VTA1-204ENST00000491881 DTWD2Q8NBA8 298 aa6.06□□□□□ -1.44
VTA1-204ENST00000491881 CYB5D2Q8WUJ1 264 aa6.06□□□□□ -1.44
VTA1-204ENST00000491881 UBXN4Q92575 508 aa6.06□□□□□ -1.44
VTA1-204ENST00000491881 ARMC5Q96C12 935 aa6.06□□□□□ -1.44
VTA1-204ENST00000491881 ATG4CQ96DT6 458 aa6.06□□□□□ -1.44
VTA1-204ENST00000491881 PCDHA11Q9Y5I1 949 aa6.06□□□□□ -1.44
VTA1-204ENST00000491881 GUCY2CP25092 1073 aa6.05□□□□□ -1.44
VTA1-204ENST00000491881 GBP1P32455 592 aa6.05□□□□□ -1.44
VTA1-204ENST00000491881 ETFBP38117 255 aa6.05□□□□□ -1.44
VTA1-204ENST00000491881 CHRNEQ04844 493 aa6.05□□□□□ -1.44
VTA1-204ENST00000491881 DUSP4Q13115 394 aa6.05□□□□□ -1.44
VTA1-204ENST00000491881 SNX17Q15036 470 aa6.05□□□□□ -1.44
VTA1-204ENST00000491881 PPP2R5EQ16537 467 aa6.05□□□□□ -1.44
VTA1-204ENST00000491881 CDCP2Q5VXM1 449 aa6.05□□□□□ -1.44
VTA1-204ENST00000491881 CKAP2LQ8IYA6 745 aa6.05□□□□□ -1.44
VTA1-204ENST00000491881 CCDC74BQ96LY2 380 aa6.05□□□□□ -1.44
VTA1-204ENST00000491881 CNNM2Q9H8M5 875 aa6.05□□□□□ -1.44
VTA1-204ENST00000491881 GCM1Q9NP62 436 aa6.05□□□□□ -1.44
VTA1-204ENST00000491881 SMAD7O15105 426 aaKnown RBP6.04□□□□□ -1.44
VTA1-204ENST00000491881 NME1P15531 152 aaKnown RBP6.04□□□□□ -1.44
VTA1-204ENST00000491881 RUFY4Q6ZNE9 571 aa6.04□□□□□ -1.44
VTA1-204ENST00000491881 DBX2Q6ZNG2 339 aa6.04□□□□□ -1.44
VTA1-204ENST00000491881 KIF2CQ99661 725 aa6.04□□□□□ -1.44
VTA1-204ENST00000491881 HIRIP3Q9BW71 556 aaPredicted RBP6.04□□□□□ -1.44
VTA1-204ENST00000491881 PRKAG3Q9UGI9 489 aa6.04□□□□□ -1.44
VTA1-204ENST00000491881 FAM86C2PA6NEL3 165 aa6.03□□□□□ -1.44
VTA1-204ENST00000491881 TRIM13O60858 407 aa6.03□□□□□ -1.44
VTA1-204ENST00000491881 SASH1O94885 1247 aa6.03□□□□□ -1.44
VTA1-204ENST00000491881 POLR2BP30876 1174 aaKnown RBP6.03□□□□□ -1.44
VTA1-204ENST00000491881 SSPNQ14714 243 aa6.03□□□□□ -1.44
VTA1-204ENST00000491881 ANKS3Q6ZW76 656 aa6.03□□□□□ -1.44
VTA1-204ENST00000491881 TAB3Q8N5C8 712 aaPredicted RBP6.03□□□□□ -1.44
VTA1-204ENST00000491881 FAM169BQ8N8A8 192 aa6.03□□□□□ -1.44
VTA1-204ENST00000491881 ANKS4BQ8N8V4 417 aa6.03□□□□□ -1.44
VTA1-204ENST00000491881 C19orf47Q8N9M1 422 aaKnown RBP6.03□□□□□ -1.44
VTA1-204ENST00000491881 PPP1R13LQ8WUF5 828 aa6.03□□□□□ -1.44
VTA1-204ENST00000491881 DNAJC2Q99543 621 aaKnown RBP6.03□□□□□ -1.44
VTA1-204ENST00000491881 TRIM55Q9BYV6 548 aa6.03□□□□□ -1.44
VTA1-204ENST00000491881 ACTR10Q9NZ32 417 aa6.03□□□□□ -1.44
VTA1-204ENST00000491881 SLC12A7Q9Y666 1083 aa6.03□□□□□ -1.44
VTA1-204ENST00000491881 ADAMTS20P59510 1910 aa6.03□□□□□ -1.44
VTA1-204ENST00000491881 OR14I1A6ND48 311 aa6.02□□□□□ -1.45
VTA1-204ENST00000491881 TNFRSF10CO14798 259 aa6.02□□□□□ -1.45
VTA1-204ENST00000491881 RGS13O14921 159 aa6.02□□□□□ -1.45
VTA1-204ENST00000491881 PSPNO60542 156 aa6.02□□□□□ -1.45
VTA1-204ENST00000491881 CCNFP41002 786 aa6.02□□□□□ -1.45
VTA1-204ENST00000491881 GALK1P51570 392 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms