RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 MAPK8IP1Q9UQF2 711 aa12.06□□□□□ -0.48
SNED1-211ENST00000491761 FAM170AA1A519 330 aa12.06□□□□□ -0.48
SNED1-211ENST00000491761 ORC4O43929 436 aa12.06□□□□□ -0.48
SNED1-211ENST00000491761 ERCC3P19447 782 aa12.06□□□□□ -0.48
SNED1-211ENST00000491761 TRIM21P19474 475 aaKnown RBP12.06□□□□□ -0.48
SNED1-211ENST00000491761 NOP2P46087 812 aaKnown RBP12.06□□□□□ -0.48
SNED1-211ENST00000491761 ARID5AQ03989 594 aa12.06□□□□□ -0.48
SNED1-211ENST00000491761 NT5DC1Q5TFE4 455 aa12.06□□□□□ -0.48
SNED1-211ENST00000491761 WWC2Q6AWC2 1192 aa12.06□□□□□ -0.48
SNED1-211ENST00000491761 GOLGA1Q92805 767 aa12.06□□□□□ -0.48
SNED1-211ENST00000491761 VPS16Q9H269 839 aa12.06□□□□□ -0.48
SNED1-211ENST00000491761 TCP11L1Q9NUJ3 509 aa12.06□□□□□ -0.48
SNED1-211ENST00000491761 MORC2Q9Y6X9 1032 aaPredicted RBP12.06□□□□□ -0.48
SNED1-211ENST00000491761 SPATA31A1Q5TZJ5 1347 aa12.06□□□□□ -0.48
SNED1-211ENST00000491761 CTAGE15A4D2H0 777 aa12.06□□□□□ -0.48
SNED1-211ENST00000491761 CTAGE8P0CG41 777 aa12.06□□□□□ -0.48
SNED1-211ENST00000491761 SARSP49591 514 aaKnown RBP12.06□□□□□ -0.48
SNED1-211ENST00000491761 IQCEQ6IPM2 695 aa12.06□□□□□ -0.48
SNED1-211ENST00000491761 CTAGE6Q86UF2 777 aa12.06□□□□□ -0.48
SNED1-211ENST00000491761 CTAGE4Q8IX94 777 aa12.06□□□□□ -0.48
SNED1-211ENST00000491761 CCDC51Q96ER9 411 aa12.06□□□□□ -0.48
SNED1-211ENST00000491761 DCP1AQ9NPI6 582 aaPredicted RBP12.06□□□□□ -0.48
SNED1-211ENST00000491761 SEC63Q9UGP8 760 aaKnown RBP12.06□□□□□ -0.48
SNED1-211ENST00000491761 ZNF804BA4D1E1 1349 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 BMP6P22004 513 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 CASP1P29466 404 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 WDR66Q8TBY9 1149 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 PANX2Q96RD6 677 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 NID2Q14112 1375 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 CALRP27797 417 aaKnown RBP12.05□□□□□ -0.48
SNED1-211ENST00000491761 TROAPQ12815 778 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 TCERG1LQ5VWI1 586 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 CERKQ8TCT0 537 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 NELFBQ8WX92 580 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 NSUN4Q96CB9 384 aaKnown RBP12.05□□□□□ -0.48
SNED1-211ENST00000491761 MYO6Q9UM54 1294 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 STRCP1A6NGW2 1772 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 PSMA7O14818 248 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 ST5P78524 1137 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 RBL2Q08999 1139 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 PKN1Q16512 942 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 TOGARAM2Q6ZUX3 1019 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 TMTC1Q8IUR5 882 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 PNMA1Q8ND90 353 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 TRIM47Q96LD4 638 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 HSD3B7Q9H2F3 369 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 NMT2O60551 498 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 CYP2D6P10635 497 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 ZNF18P17022 549 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 ZSCAN20P17040 1043 aaPredicted RBP12.05□□□□□ -0.48
SNED1-211ENST00000491761 LONP1P36776 959 aaKnown RBP12.05□□□□□ -0.48
SNED1-211ENST00000491761 ATP2C1P98194 919 aaPredicted RBP12.05□□□□□ -0.48
SNED1-211ENST00000491761 UBXN1Q04323 297 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 TRIM14Q14142 442 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 NR1I3Q14994 352 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 TRAPPC3LQ5T215 181 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 REXO1L1PQ8IX06 675 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 SRBD1Q8N5C6 995 aaKnown RBP12.05□□□□□ -0.48
SNED1-211ENST00000491761 TC2NQ8N9U0 490 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 TAB2Q9NYJ8 693 aa12.05□□□□□ -0.48
SNED1-211ENST00000491761 A0A1B0GTH6 734 aa12.04□□□□□ -0.48
SNED1-211ENST00000491761 KCNQ2O43526 872 aa12.04□□□□□ -0.48
SNED1-211ENST00000491761 SEPT7Q16181 437 aaKnown RBP12.04□□□□□ -0.48
SNED1-211ENST00000491761 PFKFB3Q16875 520 aaPredicted RBP12.04□□□□□ -0.48
SNED1-211ENST00000491761 CEP112Q8N8E3 955 aa12.04□□□□□ -0.48
SNED1-211ENST00000491761 TTF2Q9UNY4 1162 aaKnown RBP12.04□□□□□ -0.48
SNED1-211ENST00000491761 CTAGE9A4FU28 777 aa12.04□□□□□ -0.48
SNED1-211ENST00000491761 PRDX5P30044 214 aa12.04□□□□□ -0.48
SNED1-211ENST00000491761 ZNF804AQ7Z570 1209 aa12.04□□□□□ -0.48
SNED1-211ENST00000491761 FBXO33Q7Z6M2 555 aa12.04□□□□□ -0.48
SNED1-211ENST00000491761 CEP57Q86XR8 500 aa12.04□□□□□ -0.48
SNED1-211ENST00000491761 TXLNBQ8N3L3 684 aa12.04□□□□□ -0.48
SNED1-211ENST00000491761 GPKOWQ92917 476 aaPredicted RBP eCLIP12.04□□□□□ -0.48
SNED1-211ENST00000491761 POTEB2H3BUK9 544 aa12.04□□□□□ -0.48
SNED1-211ENST00000491761 TMED8Q6PL24 325 aaPredicted RBP12.04□□□□□ -0.48
SNED1-211ENST00000491761 GPR161Q8N6U8 529 aaKnown RBP12.04□□□□□ -0.48
SNED1-211ENST00000491761 PLEKHA4Q9H4M7 779 aa12.04□□□□□ -0.48
SNED1-211ENST00000491761 DISP2A7MBM2 1401 aa12.04□□□□□ -0.48
SNED1-211ENST00000491761 LRP6O75581 1613 aa12.03□□□□□ -0.48
SNED1-211ENST00000491761 GOLGA6L7A0A1B0GV03 622 aa12.03□□□□□ -0.48
SNED1-211ENST00000491761 TEX33O43247 280 aa12.03□□□□□ -0.48
SNED1-211ENST00000491761 RPN1P04843 607 aaKnown RBP12.03□□□□□ -0.48
SNED1-211ENST00000491761 CASP14P31944 242 aa12.03□□□□□ -0.48
SNED1-211ENST00000491761 CLCN6P51797 869 aa12.03□□□□□ -0.48
SNED1-211ENST00000491761 NAPAP54920 295 aa12.03□□□□□ -0.48
SNED1-211ENST00000491761 DPYDQ12882 1025 aa12.03□□□□□ -0.48
SNED1-211ENST00000491761 CCDC96Q2M329 555 aa12.03□□□□□ -0.48
SNED1-211ENST00000491761 TBC1D9BQ66K14 1250 aa12.03□□□□□ -0.48
SNED1-211ENST00000491761 ZNF526Q8TF50 670 aaPredicted RBP12.03□□□□□ -0.48
SNED1-211ENST00000491761 ZNF408Q9H9D4 720 aa12.03□□□□□ -0.48
SNED1-211ENST00000491761 PAPPAQ13219 1627 aa12.03□□□□□ -0.48
SNED1-211ENST00000491761 SOWAHDA6NJG2 315 aa12.03□□□□□ -0.48
SNED1-211ENST00000491761 MAP2K1Q02750 393 aaPredicted RBP12.03□□□□□ -0.48
SNED1-211ENST00000491761 ARL6IP4Q66PJ3 421 aaKnown RBP12.03□□□□□ -0.48
SNED1-211ENST00000491761 CYP26C1Q6V0L0 522 aa12.03□□□□□ -0.48
SNED1-211ENST00000491761 PSMB7Q99436 277 aa12.03□□□□□ -0.48
SNED1-211ENST00000491761 PCDHA4Q9UN74 947 aa12.03□□□□□ -0.48
SNED1-211ENST00000491761 NWD2Q9ULI1 1742 aa12.03□□□□□ -0.48
SNED1-211ENST00000491761 CNTNAP5Q8WYK1 1306 aa12.03□□□□□ -0.48
SNED1-211ENST00000491761 KCNJ18B7U540 433 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms