RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 HLA-CQ95604 372 aa13.5□□□□□ -0.25
CLCNKA-206ENST00000491433 CDCA7LQ96GN5 454 aa13.5□□□□□ -0.25
CLCNKA-206ENST00000491433 MFSD14AQ96MC6 490 aa13.5□□□□□ -0.25
CLCNKA-206ENST00000491433 PTPRZ1P23471 2315 aaPredicted RBP13.5□□□□□ -0.25
CLCNKA-206ENST00000491433 REV3LO60673 3130 aa13.49□□□□□ -0.25
CLCNKA-206ENST00000491433 ELP1O95163 1332 aa13.49□□□□□ -0.25
CLCNKA-206ENST00000491433 MAGEB6P1A0A0J9YX57 407 aa13.49□□□□□ -0.25
CLCNKA-206ENST00000491433 A0A1W2PRG0 241 aa13.49□□□□□ -0.25
CLCNKA-206ENST00000491433 GRXCR1A8MXD5 290 aa13.49□□□□□ -0.25
CLCNKA-206ENST00000491433 TLR3O15455 904 aaKnown RBP13.49□□□□□ -0.25
CLCNKA-206ENST00000491433 GTPBP6O43824 516 aaPredicted RBP13.49□□□□□ -0.25
CLCNKA-206ENST00000491433 SURF6O75683 361 aaKnown RBP13.49□□□□□ -0.25
CLCNKA-206ENST00000491433 ACLYP53396 1101 aa13.49□□□□□ -0.25
CLCNKA-206ENST00000491433 POLA2Q14181 598 aa13.49□□□□□ -0.25
CLCNKA-206ENST00000491433 TTF1Q15361 905 aaPredicted RBP13.49□□□□□ -0.25
CLCNKA-206ENST00000491433 RIOX2Q8IUF8 465 aa13.49□□□□□ -0.25
CLCNKA-206ENST00000491433 PCSK9Q8NBP7 692 aaKnown RBP13.49□□□□□ -0.25
CLCNKA-206ENST00000491433 ATG4CQ96DT6 458 aa13.49□□□□□ -0.25
CLCNKA-206ENST00000491433 GLT1D1Q96MS3 346 aa13.49□□□□□ -0.25
CLCNKA-206ENST00000491433 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.49□□□□□ -0.25
CLCNKA-206ENST00000491433 VCPKMTQ9H867 229 aa13.49□□□□□ -0.25
CLCNKA-206ENST00000491433 SPC25Q9HBM1 224 aa13.49□□□□□ -0.25
CLCNKA-206ENST00000491433 MCM9Q9NXL9 1143 aa13.49□□□□□ -0.25
CLCNKA-206ENST00000491433 FAM184BQ9ULE4 1060 aa13.49□□□□□ -0.25
CLCNKA-206ENST00000491433 TMX2Q9Y320 296 aa13.49□□□□□ -0.25
CLCNKA-206ENST00000491433 PARP14Q460N5 1801 aa13.48□□□□□ -0.25
CLCNKA-206ENST00000491433 ADAMTS4O75173 837 aa13.48□□□□□ -0.25
CLCNKA-206ENST00000491433 ZNF792Q3KQV3 632 aa13.48□□□□□ -0.25
CLCNKA-206ENST00000491433 SSH3Q8TE77 659 aa13.48□□□□□ -0.25
CLCNKA-206ENST00000491433 CCDC17Q96LX7 622 aa13.48□□□□□ -0.25
CLCNKA-206ENST00000491433 RIOK1Q9BRS2 568 aaKnown RBP13.48□□□□□ -0.25
CLCNKA-206ENST00000491433 DBNLQ9UJU6 430 aaKnown RBP13.48□□□□□ -0.25
CLCNKA-206ENST00000491433 COL11A1P12107 1806 aaPredicted RBP13.48□□□□□ -0.25
CLCNKA-206ENST00000491433 ZNF318Q5VUA4 2279 aa13.47□□□□□ -0.25
CLCNKA-206ENST00000491433 ZNF865P0CJ78 1059 aaPredicted RBP13.47□□□□□ -0.25
CLCNKA-206ENST00000491433 SSTR3P32745 418 aaPredicted RBP13.47□□□□□ -0.25
CLCNKA-206ENST00000491433 STAT3P40763 770 aa13.47□□□□□ -0.25
CLCNKA-206ENST00000491433 ATP8B2P98198 1209 aa13.47□□□□□ -0.25
CLCNKA-206ENST00000491433 ICA1Q05084 483 aa13.47□□□□□ -0.25
CLCNKA-206ENST00000491433 TMEM132BQ14DG7 1078 aa13.47□□□□□ -0.25
CLCNKA-206ENST00000491433 TMEM240Q5SV17 173 aa13.47□□□□□ -0.25
CLCNKA-206ENST00000491433 AMOTL1Q8IY63 956 aa13.47□□□□□ -0.25
CLCNKA-206ENST00000491433 NKX2-4Q9H2Z4 354 aa13.47□□□□□ -0.25
CLCNKA-206ENST00000491433 TBX21Q9UL17 535 aa13.47□□□□□ -0.25
CLCNKA-206ENST00000491433 ADAMTS5Q9UNA0 930 aa13.47□□□□□ -0.25
CLCNKA-206ENST00000491433 ATRXP46100 2492 aa13.47□□□□□ -0.25
CLCNKA-206ENST00000491433 CHD7Q9P2D1 2997 aa13.47□□□□□ -0.25
CLCNKA-206ENST00000491433 SYNRGQ9UMZ2 1314 aa13.46□□□□□ -0.25
CLCNKA-206ENST00000491433 A0A0U1RQG5 324 aaPredicted RBP13.46□□□□□ -0.25
CLCNKA-206ENST00000491433 APBB1O00213 710 aa13.46□□□□□ -0.25
CLCNKA-206ENST00000491433 DCXO43602 365 aa13.46□□□□□ -0.25
CLCNKA-206ENST00000491433 DUSP11O75319 330 aaKnown RBP13.46□□□□□ -0.25
CLCNKA-206ENST00000491433 PGK2P07205 417 aa13.46□□□□□ -0.25
CLCNKA-206ENST00000491433 TRIM27P14373 513 aa13.46□□□□□ -0.25
CLCNKA-206ENST00000491433 CST5P28325 142 aaPredicted RBP13.46□□□□□ -0.25
CLCNKA-206ENST00000491433 KCNA10Q16322 511 aa13.46□□□□□ -0.25
CLCNKA-206ENST00000491433 RASIP1Q5U651 963 aa13.46□□□□□ -0.25
CLCNKA-206ENST00000491433 SAMD1Q6SPF0 538 aaPredicted RBP13.46□□□□□ -0.25
CLCNKA-206ENST00000491433 KLHDC9Q8NEP7 349 aa13.46□□□□□ -0.25
CLCNKA-206ENST00000491433 VTI1AQ96AJ9 217 aa13.46□□□□□ -0.25
CLCNKA-206ENST00000491433 PRRX2Q99811 253 aa13.46□□□□□ -0.25
CLCNKA-206ENST00000491433 CCDC8Q9H0W5 538 aaPredicted RBP13.46□□□□□ -0.25
CLCNKA-206ENST00000491433 GOPCQ9HD26 462 aa13.46□□□□□ -0.25
CLCNKA-206ENST00000491433 NOP58Q9Y2X3 529 aaKnown RBP13.46□□□□□ -0.25
CLCNKA-206ENST00000491433 KMT2BQ9UMN6 2715 aaPredicted RBP13.45□□□□□ -0.26
CLCNKA-206ENST00000491433 SPICE1Q8N0Z3 855 aa13.45□□□□□ -0.26
CLCNKA-206ENST00000491433 DDX11Q96FC9 970 aa13.45□□□□□ -0.26
CLCNKA-206ENST00000491433 SEZ6LQ9BYH1 1024 aa13.45□□□□□ -0.26
CLCNKA-206ENST00000491433 ARVCFO00192 962 aa13.44□□□□□ -0.26
CLCNKA-206ENST00000491433 VWA5AO00534 786 aa13.44□□□□□ -0.26
CLCNKA-206ENST00000491433 CSF2RAP15509 400 aa13.44□□□□□ -0.26
CLCNKA-206ENST00000491433 TAL1P17542 331 aaPredicted RBP13.44□□□□□ -0.26
CLCNKA-206ENST00000491433 POU3F3P20264 500 aaPredicted RBP13.44□□□□□ -0.26
CLCNKA-206ENST00000491433 ID4P47928 161 aa13.44□□□□□ -0.26
CLCNKA-206ENST00000491433 CDK7P50613 346 aa13.44□□□□□ -0.26
CLCNKA-206ENST00000491433 MAMDC4Q6UXC1 1216 aa13.44□□□□□ -0.26
CLCNKA-206ENST00000491433 HFE2Q6ZVN8 426 aa13.44□□□□□ -0.26
CLCNKA-206ENST00000491433 ZNF365Q70YC5 407 aa13.44□□□□□ -0.26
CLCNKA-206ENST00000491433 ERC1Q8IUD2 1116 aa13.44□□□□□ -0.26
CLCNKA-206ENST00000491433 PRSS33Q8NF86 280 aa13.44□□□□□ -0.26
CLCNKA-206ENST00000491433 EAF2Q96CJ1 260 aaPredicted RBP13.44□□□□□ -0.26
CLCNKA-206ENST00000491433 DDRGK1Q96HY6 314 aa13.44□□□□□ -0.26
CLCNKA-206ENST00000491433 IL23AQ9NPF7 189 aa13.44□□□□□ -0.26
CLCNKA-206ENST00000491433 DCP1AQ9NPI6 582 aaPredicted RBP13.44□□□□□ -0.26
CLCNKA-206ENST00000491433 PPP1R9AQ9ULJ8 1098 aa13.44□□□□□ -0.26
CLCNKA-206ENST00000491433 MTCH2Q9Y6C9 303 aa13.44□□□□□ -0.26
CLCNKA-206ENST00000491433 FGBP02675 491 aa13.43□□□□□ -0.26
CLCNKA-206ENST00000491433 ASGR1P07306 291 aa13.43□□□□□ -0.26
CLCNKA-206ENST00000491433 C6orf222P0C671 652 aaPredicted RBP13.43□□□□□ -0.26
CLCNKA-206ENST00000491433 KIAA1755Q5JYT7 1200 aa13.43□□□□□ -0.26
CLCNKA-206ENST00000491433 SLC9C2Q5TAH2 1124 aa13.43□□□□□ -0.26
CLCNKA-206ENST00000491433 PPP2R2DQ66LE6 453 aa13.43□□□□□ -0.26
CLCNKA-206ENST00000491433 CCSAPQ6IQ19 270 aaPredicted RBP13.43□□□□□ -0.26
CLCNKA-206ENST00000491433 C16orf59Q7L2K0 433 aa13.43□□□□□ -0.26
CLCNKA-206ENST00000491433 ZNF467Q7Z7K2 595 aaPredicted RBP13.43□□□□□ -0.26
CLCNKA-206ENST00000491433 FAM178BQ8IXR5 827 aa13.43□□□□□ -0.26
CLCNKA-206ENST00000491433 FRAT1Q92837 279 aaPredicted RBP13.43□□□□□ -0.26
CLCNKA-206ENST00000491433 ABHD16BQ9H3Z7 469 aa13.43□□□□□ -0.26
CLCNKA-206ENST00000491433 ANTXR1Q9H6X2 564 aa13.43□□□□□ -0.26
CLCNKA-206ENST00000491433 KANSL2Q9H9L4 492 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms