RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 SSRP1Q08945 709 aaKnown RBP25.22■■□□□ 1.63
VCPKMT-204ENST00000491402 NOGQ13253 232 aa25.22■■□□□ 1.63
VCPKMT-204ENST00000491402 SH3D19Q5HYK7 790 aa25.22■■□□□ 1.63
VCPKMT-204ENST00000491402 DNAJC5GQ8N7S2 189 aa25.22■■□□□ 1.63
VCPKMT-204ENST00000491402 ORC3Q9UBD5 711 aaPredicted RBP25.22■■□□□ 1.63
VCPKMT-204ENST00000491402 KCNH4Q9UQ05 1017 aa25.22■■□□□ 1.63
VCPKMT-204ENST00000491402 TMEM232C9JQI7 657 aa25.21■■□□□ 1.63
VCPKMT-204ENST00000491402 CXCL11O14625 94 aa25.21■■□□□ 1.63
VCPKMT-204ENST00000491402 SLC16A2P36021 539 aa25.21■■□□□ 1.63
VCPKMT-204ENST00000491402 MS4A4AQ96JQ5 239 aa25.21■■□□□ 1.63
VCPKMT-204ENST00000491402 TMOD4Q9NZQ9 345 aa25.21■■□□□ 1.63
VCPKMT-204ENST00000491402 STAT2P52630 851 aa25.21■■□□□ 1.63
VCPKMT-204ENST00000491402 SNAPC2Q13487 334 aa25.21■■□□□ 1.63
VCPKMT-204ENST00000491402 RIOX1Q9H6W3 641 aa25.21■■□□□ 1.63
VCPKMT-204ENST00000491402 A0A0G2JLL6 359 aaPredicted RBP25.2■■□□□ 1.62
VCPKMT-204ENST00000491402 GTF2A2P52657 109 aa25.2■■□□□ 1.62
VCPKMT-204ENST00000491402 PRRT2Q7Z6L0 340 aaPredicted RBP25.2■■□□□ 1.62
VCPKMT-204ENST00000491402 FAM184AQ8NB25 1140 aa25.2■■□□□ 1.62
VCPKMT-204ENST00000491402 V9GY48 417 aaPredicted RBP25.2■■□□□ 1.62
VCPKMT-204ENST00000491402 PCNTO95613 3336 aa25.2■■□□□ 1.62
VCPKMT-204ENST00000491402 PARP14Q460N5 1801 aa25.2■■□□□ 1.62
VCPKMT-204ENST00000491402 PRPF3O43395 683 aaKnown RBP25.19■■□□□ 1.62
VCPKMT-204ENST00000491402 AKAP17AQ02040 695 aaKnown RBP25.19■■□□□ 1.62
VCPKMT-204ENST00000491402 BTNL9Q6UXG8 535 aa25.19■■□□□ 1.62
VCPKMT-204ENST00000491402 hCG_1642624A0A1W2PR95 340 aa25.18■■□□□ 1.62
VCPKMT-204ENST00000491402 DEXIO95424 95 aa25.18■■□□□ 1.62
VCPKMT-204ENST00000491402 DDIT3P35638 169 aa25.18■■□□□ 1.62
VCPKMT-204ENST00000491402 IKQ13123 557 aaPredicted RBP25.18■■□□□ 1.62
VCPKMT-204ENST00000491402 ADGRF4Q8IZF3 695 aa25.18■■□□□ 1.62
VCPKMT-204ENST00000491402 RPAP3Q9H6T3 665 aaPredicted RBP25.18■■□□□ 1.62
VCPKMT-204ENST00000491402 CCL15-CCL14A0A0B4J2E2 113 aa25.18■■□□□ 1.62
VCPKMT-204ENST00000491402 MANSC4A6NHS7 340 aaPredicted RBP25.18■■□□□ 1.62
VCPKMT-204ENST00000491402 CCL15Q16663 113 aa25.18■■□□□ 1.62
VCPKMT-204ENST00000491402 PIBF1Q8WXW3 757 aa25.18■■□□□ 1.62
VCPKMT-204ENST00000491402 TANGO6Q9C0B7 1094 aa25.18■■□□□ 1.62
VCPKMT-204ENST00000491402 VAT1LQ9HCJ6 419 aa25.18■■□□□ 1.62
VCPKMT-204ENST00000491402 RBM27Q9P2N5 1060 aaKnown RBP25.18■■□□□ 1.62
VCPKMT-204ENST00000491402 FEM1BQ9UK73 627 aa25.18■■□□□ 1.62
VCPKMT-204ENST00000491402 KIF3AQ9Y496 699 aa25.18■■□□□ 1.62
VCPKMT-204ENST00000491402 PLA2G6O60733 806 aa25.17■■□□□ 1.62
VCPKMT-204ENST00000491402 CETPP11597 493 aa25.17■■□□□ 1.62
VCPKMT-204ENST00000491402 MAP2K2P36507 400 aa25.17■■□□□ 1.62
VCPKMT-204ENST00000491402 PROCA1Q8NCQ7 364 aaPredicted RBP25.17■■□□□ 1.62
VCPKMT-204ENST00000491402 PKN1Q16512 942 aa25.16■■□□□ 1.62
VCPKMT-204ENST00000491402 SYDE2Q5VT97 1194 aa25.16■■□□□ 1.62
VCPKMT-204ENST00000491402 CHURC1Q8WUH1 139 aa25.16■■□□□ 1.62
VCPKMT-204ENST00000491402 BRI3BPQ8WY22 251 aa25.16■■□□□ 1.62
VCPKMT-204ENST00000491402 JMJD4Q9H9V9 463 aa25.16■■□□□ 1.62
VCPKMT-204ENST00000491402 FBXO28Q9NVF7 368 aa25.16■■□□□ 1.62
VCPKMT-204ENST00000491402 RLFQ13129 1914 aa25.16■■□□□ 1.62
VCPKMT-204ENST00000491402 MOGSQ13724 837 aa25.16■■□□□ 1.62
VCPKMT-204ENST00000491402 GADL1Q6ZQY3 521 aa25.16■■□□□ 1.62
VCPKMT-204ENST00000491402 FAM160B2Q86V87 743 aa25.16■■□□□ 1.62
VCPKMT-204ENST00000491402 HOMER1Q86YM7 354 aa25.16■■□□□ 1.62
VCPKMT-204ENST00000491402 WASF1Q92558 559 aa25.16■■□□□ 1.62
VCPKMT-204ENST00000491402 RRP36Q96EU6 259 aaKnown RBP25.16■■□□□ 1.62
VCPKMT-204ENST00000491402 AIFM3Q96NN9 605 aa25.16■■□□□ 1.62
VCPKMT-204ENST00000491402 MTMR8Q96EF0 704 aa25.15■■□□□ 1.62
VCPKMT-204ENST00000491402 PIGSQ96S52 555 aa25.15■■□□□ 1.62
VCPKMT-204ENST00000491402 PTPN18Q99952 460 aa25.15■■□□□ 1.62
VCPKMT-204ENST00000491402 ALG1Q9BT22 464 aa25.15■■□□□ 1.62
VCPKMT-204ENST00000491402 PRR12Q9ULL5 1215 aa25.15■■□□□ 1.62
VCPKMT-204ENST00000491402 PDCP20941 246 aa25.14■■□□□ 1.62
VCPKMT-204ENST00000491402 INHBEP58166 350 aa25.14■■□□□ 1.62
VCPKMT-204ENST00000491402 PFKFB3Q16875 520 aaPredicted RBP25.14■■□□□ 1.62
VCPKMT-204ENST00000491402 TREML2Q5T2D2 321 aa25.14■■□□□ 1.62
VCPKMT-204ENST00000491402 LARP1BQ659C4 914 aaKnown RBP25.14■■□□□ 1.62
VCPKMT-204ENST00000491402 SEC63Q9UGP8 760 aaKnown RBP25.14■■□□□ 1.62
VCPKMT-204ENST00000491402 TESPA1A2RU30 521 aaPredicted RBP25.13■■□□□ 1.61
VCPKMT-204ENST00000491402 FLOT1O75955 427 aa25.13■■□□□ 1.61
VCPKMT-204ENST00000491402 SCG2P13521 617 aa25.13■■□□□ 1.61
VCPKMT-204ENST00000491402 SYT1P21579 422 aa25.13■■□□□ 1.61
VCPKMT-204ENST00000491402 TM4SF4P48230 202 aa25.13■■□□□ 1.61
VCPKMT-204ENST00000491402 SREBF2Q12772 1141 aa25.13■■□□□ 1.61
VCPKMT-204ENST00000491402 KIFC2Q96AC6 838 aa25.13■■□□□ 1.61
VCPKMT-204ENST00000491402 SLF1Q9BQI6 1058 aa25.13■■□□□ 1.61
VCPKMT-204ENST00000491402 FASTKD5Q7L8L6 764 aaKnown RBP25.13■■□□□ 1.61
VCPKMT-204ENST00000491402 PRPF38AQ8NAV1 312 aaKnown RBP25.13■■□□□ 1.61
VCPKMT-204ENST00000491402 ZBTB5O15062 677 aa25.12■■□□□ 1.61
VCPKMT-204ENST00000491402 CDC37Q16543 378 aaPredicted RBP25.12■■□□□ 1.61
VCPKMT-204ENST00000491402 CATSPERGQ6ZRH7 1159 aa25.12■■□□□ 1.61
VCPKMT-204ENST00000491402 USP17L15C9J2P7 530 aa25.11■■□□□ 1.61
VCPKMT-204ENST00000491402 USP17L13C9JLJ4 530 aa25.11■■□□□ 1.61
VCPKMT-204ENST00000491402 USP17L11C9JVI0 530 aa25.11■■□□□ 1.61
VCPKMT-204ENST00000491402 USP17L18D6R9N7 530 aa25.11■■□□□ 1.61
VCPKMT-204ENST00000491402 USP17L22D6RA61 530 aa25.11■■□□□ 1.61
VCPKMT-204ENST00000491402 USP17L17D6RBQ6 530 aa25.11■■□□□ 1.61
VCPKMT-204ENST00000491402 USP17L19D6RCP7 530 aa25.11■■□□□ 1.61
VCPKMT-204ENST00000491402 USP17L20D6RJB6 530 aa25.11■■□□□ 1.61
VCPKMT-204ENST00000491402 IGF2BP3O00425 579 aaKnown RBP eCLIP25.11■■□□□ 1.61
VCPKMT-204ENST00000491402 FOSBP53539 338 aa25.11■■□□□ 1.61
VCPKMT-204ENST00000491402 USP17L24Q0WX57 530 aa25.11■■□□□ 1.61
VCPKMT-204ENST00000491402 PKP1Q13835 747 aa25.11■■□□□ 1.61
VCPKMT-204ENST00000491402 SAMD1Q6SPF0 538 aaPredicted RBP25.11■■□□□ 1.61
VCPKMT-204ENST00000491402 C8orf76Q96K31 380 aa25.11■■□□□ 1.61
VCPKMT-204ENST00000491402 GJB4Q9NTQ9 266 aa25.11■■□□□ 1.61
VCPKMT-204ENST00000491402 PPP1R9AQ9ULJ8 1098 aa25.11■■□□□ 1.61
VCPKMT-204ENST00000491402 AGTPBP1Q9UPW5 1226 aa25.11■■□□□ 1.61
VCPKMT-204ENST00000491402 PNMA6FA0A0J9YX94 578 aa25.1■■□□□ 1.61
VCPKMT-204ENST00000491402 BTBD19C9JJ37 291 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms