RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 DUSP13Q9UII6 198 aa8.56□□□□□ -1.04
VPS26A-206ENST00000489794 NOP56O00567 594 aaKnown RBP8.55□□□□□ -1.04
VPS26A-206ENST00000489794 RASA3Q14644 834 aa8.55□□□□□ -1.04
VPS26A-206ENST00000489794 CCDC144BQ3MJ40 725 aa8.55□□□□□ -1.04
VPS26A-206ENST00000489794 ANGEL2Q5VTE6 544 aaKnown RBP8.55□□□□□ -1.04
VPS26A-206ENST00000489794 MRM1Q6IN84 353 aaKnown RBP8.55□□□□□ -1.04
VPS26A-206ENST00000489794 BVESQ8NE79 360 aa8.55□□□□□ -1.04
VPS26A-206ENST00000489794 SGSM3Q96HU1 749 aa8.55□□□□□ -1.04
VPS26A-206ENST00000489794 PCMTD2Q9NV79 361 aa8.55□□□□□ -1.04
VPS26A-206ENST00000489794 CCDC39Q9UFE4 941 aa8.55□□□□□ -1.04
VPS26A-206ENST00000489794 SHISA3A0PJX4 238 aa8.54□□□□□ -1.04
VPS26A-206ENST00000489794 LTKP29376 864 aa8.54□□□□□ -1.04
VPS26A-206ENST00000489794 NOP2P46087 812 aaKnown RBP8.54□□□□□ -1.04
VPS26A-206ENST00000489794 PCBP3P57721 371 aaKnown RBP8.54□□□□□ -1.04
VPS26A-206ENST00000489794 GRB10Q13322 594 aa8.54□□□□□ -1.04
VPS26A-206ENST00000489794 SV2CQ496J9 727 aa8.54□□□□□ -1.04
VPS26A-206ENST00000489794 MTERF2Q49AM1 385 aa8.54□□□□□ -1.04
VPS26A-206ENST00000489794 RNF111Q6ZNA4 994 aa8.54□□□□□ -1.04
VPS26A-206ENST00000489794 LRRC47Q8N1G4 583 aaKnown RBP8.54□□□□□ -1.04
VPS26A-206ENST00000489794 ARHGEF39Q8N4T4 335 aa8.54□□□□□ -1.04
VPS26A-206ENST00000489794 FIBCD1Q8N539 461 aa8.54□□□□□ -1.04
VPS26A-206ENST00000489794 SYTL4Q96C24 671 aaPredicted RBP8.54□□□□□ -1.04
VPS26A-206ENST00000489794 FGD4Q96M96 766 aa8.54□□□□□ -1.04
VPS26A-206ENST00000489794 SNTG2Q9NY99 539 aa8.54□□□□□ -1.04
VPS26A-206ENST00000489794 CDK11AQ9UQ88 783 aaPredicted RBP8.54□□□□□ -1.04
VPS26A-206ENST00000489794 SSU72P8A0A1W2PR75 194 aa8.53□□□□□ -1.04
VPS26A-206ENST00000489794 IGSF3O75054 1194 aa8.53□□□□□ -1.04
VPS26A-206ENST00000489794 MED26O95402 600 aa8.53□□□□□ -1.04
VPS26A-206ENST00000489794 BMP8BP34820 402 aa8.53□□□□□ -1.04
VPS26A-206ENST00000489794 POU4F1Q01851 419 aa8.53□□□□□ -1.04
VPS26A-206ENST00000489794 IKZF1Q13422 519 aa8.53□□□□□ -1.04
VPS26A-206ENST00000489794 SLC10A6Q3KNW5 377 aa8.53□□□□□ -1.04
VPS26A-206ENST00000489794 LINC00116Q8NCU8 138 aa8.53□□□□□ -1.04
VPS26A-206ENST00000489794 AGBL5Q8NDL9 886 aa8.53□□□□□ -1.04
VPS26A-206ENST00000489794 TCTN2Q96GX1 697 aa8.53□□□□□ -1.04
VPS26A-206ENST00000489794 CCDC120Q96HB5 630 aa8.53□□□□□ -1.04
VPS26A-206ENST00000489794 NOL6Q9H6R4 1146 aaKnown RBP8.53□□□□□ -1.04
VPS26A-206ENST00000489794 ATP13A1Q9HD20 1204 aa8.53□□□□□ -1.04
VPS26A-206ENST00000489794 LRP2BPQ9P2M1 347 aa8.53□□□□□ -1.04
VPS26A-206ENST00000489794 AKT3Q9Y243 479 aa8.53□□□□□ -1.04
VPS26A-206ENST00000489794 CCDC85CA6NKD9 419 aa8.52□□□□□ -1.05
VPS26A-206ENST00000489794 WNT11O96014 354 aa8.52□□□□□ -1.05
VPS26A-206ENST00000489794 BMS1Q14692 1282 aaKnown RBP8.52□□□□□ -1.05
VPS26A-206ENST00000489794 NOP9Q86U38 636 aaKnown RBP8.52□□□□□ -1.05
VPS26A-206ENST00000489794 FLCNQ8NFG4 579 aa8.52□□□□□ -1.05
VPS26A-206ENST00000489794 BRF1Q92994 677 aa8.52□□□□□ -1.05
VPS26A-206ENST00000489794 CGGBP1Q9UFW8 167 aaPredicted RBP8.52□□□□□ -1.05
VPS26A-206ENST00000489794 RBM10P98175 930 aaKnown RBP8.51□□□□□ -1.05
VPS26A-206ENST00000489794 CREG2Q8IUH2 290 aa8.51□□□□□ -1.05
VPS26A-206ENST00000489794 ZNF513Q8N8E2 541 aaPredicted RBP8.51□□□□□ -1.05
VPS26A-206ENST00000489794 LRRN4CLQ8ND94 238 aa8.51□□□□□ -1.05
VPS26A-206ENST00000489794 PPP1R14AQ96A00 147 aa8.51□□□□□ -1.05
VPS26A-206ENST00000489794 EMC9Q9Y3B6 208 aa8.51□□□□□ -1.05
VPS26A-206ENST00000489794 AMPD2Q01433 879 aa8.5□□□□□ -1.05
VPS26A-206ENST00000489794 BNIP3Q12983 259 aa8.5□□□□□ -1.05
VPS26A-206ENST00000489794 LCE3BQ5TA77 95 aa8.5□□□□□ -1.05
VPS26A-206ENST00000489794 TRIM59Q8IWR1 403 aa8.5□□□□□ -1.05
VPS26A-206ENST00000489794 USHBP1Q8N6Y0 703 aa8.5□□□□□ -1.05
VPS26A-206ENST00000489794 ADCY4Q8NFM4 1077 aa8.5□□□□□ -1.05
VPS26A-206ENST00000489794 CWC22Q9HCG8 908 aaKnown RBP8.5□□□□□ -1.05
VPS26A-206ENST00000489794 APEX2Q9UBZ4 518 aa8.5□□□□□ -1.05
VPS26A-206ENST00000489794 TCFL5Q9UL49 500 aa8.5□□□□□ -1.05
VPS26A-206ENST00000489794 ZNF205O95201 554 aa8.49□□□□□ -1.05
VPS26A-206ENST00000489794 ESR1P03372 595 aa8.49□□□□□ -1.05
VPS26A-206ENST00000489794 CD8BP10966 210 aa8.49□□□□□ -1.05
VPS26A-206ENST00000489794 CTSKP43235 329 aa8.49□□□□□ -1.05
VPS26A-206ENST00000489794 EGR3Q06889 387 aa8.49□□□□□ -1.05
VPS26A-206ENST00000489794 LONRF2Q1L5Z9 754 aa8.49□□□□□ -1.05
VPS26A-206ENST00000489794 ZC3H12BQ5HYM0 836 aaKnown RBP8.49□□□□□ -1.05
VPS26A-206ENST00000489794 CCDC140Q96MF4 163 aa8.49□□□□□ -1.05
VPS26A-206ENST00000489794 ZDHHC15Q96MV8 337 aa8.49□□□□□ -1.05
VPS26A-206ENST00000489794 KRTAP4-12Q9BQ66 201 aa8.49□□□□□ -1.05
VPS26A-206ENST00000489794 ZMYM5Q9UJ78 669 aa8.49□□□□□ -1.05
VPS26A-206ENST00000489794 PCDHA11Q9Y5I1 949 aa8.49□□□□□ -1.05
VPS26A-206ENST00000489794 H0Y8X5 98 aa8.48□□□□□ -1.05
VPS26A-206ENST00000489794 MEIS1O00470 390 aa8.48□□□□□ -1.05
VPS26A-206ENST00000489794 SYPP08247 313 aa8.48□□□□□ -1.05
VPS26A-206ENST00000489794 VAV1P15498 845 aa8.48□□□□□ -1.05
VPS26A-206ENST00000489794 ZP2Q05996 745 aa8.48□□□□□ -1.05
VPS26A-206ENST00000489794 HSP90AA2PQ14568 343 aaPredicted RBP8.48□□□□□ -1.05
VPS26A-206ENST00000489794 PPP2R5DQ14738 602 aa8.48□□□□□ -1.05
VPS26A-206ENST00000489794 SPRED2Q7Z698 418 aa8.48□□□□□ -1.05
VPS26A-206ENST00000489794 ZNF227Q86WZ6 799 aa8.48□□□□□ -1.05
VPS26A-206ENST00000489794 MRGPRX3Q96LB0 322 aa8.48□□□□□ -1.05
VPS26A-206ENST00000489794 FAM221BA6H8Z2 402 aa8.47□□□□□ -1.05
VPS26A-206ENST00000489794 ITGAVP06756 1048 aa8.47□□□□□ -1.05
VPS26A-206ENST00000489794 FUT4P22083 530 aa8.47□□□□□ -1.05
VPS26A-206ENST00000489794 SSRP1Q08945 709 aaKnown RBP8.47□□□□□ -1.05
VPS26A-206ENST00000489794 SLC23A3Q6PIS1 610 aa8.47□□□□□ -1.05
VPS26A-206ENST00000489794 CRTC3Q6UUV7 619 aa8.47□□□□□ -1.05
VPS26A-206ENST00000489794 SPATA9Q9BWV2 254 aa8.47□□□□□ -1.05
VPS26A-206ENST00000489794 CARS2Q9HA77 564 aaKnown RBP8.47□□□□□ -1.05
VPS26A-206ENST00000489794 PAK6Q9NQU5 681 aaPredicted RBP8.47□□□□□ -1.05
VPS26A-206ENST00000489794 A0A1W2PQU0 124 aa8.46□□□□□ -1.06
VPS26A-206ENST00000489794 WASH4PA8MWX3 477 aa8.46□□□□□ -1.06
VPS26A-206ENST00000489794 KCNH1O95259 989 aa8.46□□□□□ -1.06
VPS26A-206ENST00000489794 HOXC12P31275 282 aa8.46□□□□□ -1.06
VPS26A-206ENST00000489794 TEKQ02763 1124 aa8.46□□□□□ -1.06
VPS26A-206ENST00000489794 DUSP4Q13115 394 aa8.46□□□□□ -1.06
VPS26A-206ENST00000489794 TP53INP2Q8IXH6 220 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms