RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 ZNF280CQ8ND82 737 aa16.33■□□□□ 0.2
VPS26A-205ENST00000489656 FOXP1Q9H334 677 aaPredicted RBP16.33■□□□□ 0.2
VPS26A-205ENST00000489656 BARHL2Q9NY43 387 aa16.33■□□□□ 0.2
VPS26A-205ENST00000489656 VPS54Q9P1Q0 977 aa16.33■□□□□ 0.2
VPS26A-205ENST00000489656 SEC63Q9UGP8 760 aaKnown RBP16.33■□□□□ 0.2
VPS26A-205ENST00000489656 SNCAIPQ9Y6H5 919 aa16.33■□□□□ 0.2
VPS26A-205ENST00000489656 PNMA6FA0A0J9YX94 578 aa16.32■□□□□ 0.2
VPS26A-205ENST00000489656 UNCXA6NJT0 531 aa16.32■□□□□ 0.2
VPS26A-205ENST00000489656 GOLGA6L22H0YM25 854 aa16.32■□□□□ 0.2
VPS26A-205ENST00000489656 WDR46O15213 610 aaKnown RBP16.32■□□□□ 0.2
VPS26A-205ENST00000489656 POTEIP0CG38 1075 aa16.32■□□□□ 0.2
VPS26A-205ENST00000489656 POTEJP0CG39 1038 aa16.32■□□□□ 0.2
VPS26A-205ENST00000489656 PTMSP20962 102 aa16.32■□□□□ 0.2
VPS26A-205ENST00000489656 WWC2Q6AWC2 1192 aa16.32■□□□□ 0.2
VPS26A-205ENST00000489656 MCTP1Q6DN14 999 aa16.32■□□□□ 0.2
VPS26A-205ENST00000489656 GALNT17Q6IS24 598 aa16.32■□□□□ 0.2
VPS26A-205ENST00000489656 CCDC84Q86UT8 332 aaPredicted RBP16.32■□□□□ 0.2
VPS26A-205ENST00000489656 CCDC148Q8NFR7 591 aa16.32■□□□□ 0.2
VPS26A-205ENST00000489656 CCDC12Q8WUD4 166 aaPredicted RBP16.32■□□□□ 0.2
VPS26A-205ENST00000489656 C12orf42Q96LP6 360 aa16.32■□□□□ 0.2
VPS26A-205ENST00000489656 PIGSQ96S52 555 aa16.32■□□□□ 0.2
VPS26A-205ENST00000489656 FEZ1Q99689 392 aa16.32■□□□□ 0.2
VPS26A-205ENST00000489656 FZD1Q9UP38 647 aa16.32■□□□□ 0.2
VPS26A-205ENST00000489656 CLEC11AQ9Y240 323 aa16.32■□□□□ 0.2
VPS26A-205ENST00000489656 KIF28PB7ZC32 967 aa16.31■□□□□ 0.2
VPS26A-205ENST00000489656 C19orf81C9J6K1 198 aa16.31■□□□□ 0.2
VPS26A-205ENST00000489656 STXBP3O00186 592 aa16.31■□□□□ 0.2
VPS26A-205ENST00000489656 ZBTB5O15062 677 aa16.31■□□□□ 0.2
VPS26A-205ENST00000489656 RAD21O60216 631 aa16.31■□□□□ 0.2
VPS26A-205ENST00000489656 CALML3P27482 149 aa16.31■□□□□ 0.2
VPS26A-205ENST00000489656 BACE1P56817 501 aa16.31■□□□□ 0.2
VPS26A-205ENST00000489656 VGLL4Q14135 290 aa16.31■□□□□ 0.2
VPS26A-205ENST00000489656 NPY5RQ15761 445 aa16.31■□□□□ 0.2
VPS26A-205ENST00000489656 SYDE2Q5VT97 1194 aa16.31■□□□□ 0.2
VPS26A-205ENST00000489656 PPP1R18Q6NYC8 613 aa16.31■□□□□ 0.2
VPS26A-205ENST00000489656 FAM160B2Q86V87 743 aa16.31■□□□□ 0.2
VPS26A-205ENST00000489656 DIS3L2Q8IYB7 885 aaKnown RBP16.31■□□□□ 0.2
VPS26A-205ENST00000489656 TMEM87AQ8NBN3 555 aa16.31■□□□□ 0.2
VPS26A-205ENST00000489656 DAGLBQ8NCG7 672 aa16.31■□□□□ 0.2
VPS26A-205ENST00000489656 CHURC1Q8WUH1 139 aa16.31■□□□□ 0.2
VPS26A-205ENST00000489656 NUP88Q99567 741 aaPredicted RBP16.31■□□□□ 0.2
VPS26A-205ENST00000489656 KCNJ14Q9UNX9 436 aa16.31■□□□□ 0.2
VPS26A-205ENST00000489656 CSADQ9Y600 493 aa16.31■□□□□ 0.2
VPS26A-205ENST00000489656 MYH7BA7E2Y1 1941 aa16.31■□□□□ 0.2
VPS26A-205ENST00000489656 ESYT2A0FGR8 921 aa16.3■□□□□ 0.2
VPS26A-205ENST00000489656 TMEM232C9JQI7 657 aa16.3■□□□□ 0.2
VPS26A-205ENST00000489656 KRT2P35908 639 aa16.3■□□□□ 0.2
VPS26A-205ENST00000489656 SLC16A2P36021 539 aa16.3■□□□□ 0.2
VPS26A-205ENST00000489656 STAT2P52630 851 aa16.3■□□□□ 0.2
VPS26A-205ENST00000489656 KRT85P78386 507 aa16.3■□□□□ 0.2
VPS26A-205ENST00000489656 DNM1Q05193 864 aaKnown RBP16.3■□□□□ 0.2
VPS26A-205ENST00000489656 SPP2Q13103 211 aa16.3■□□□□ 0.2
VPS26A-205ENST00000489656 FAM83BQ5T0W9 1011 aa16.3■□□□□ 0.2
VPS26A-205ENST00000489656 ARMC9Q7Z3E5 817 aa16.3■□□□□ 0.2
VPS26A-205ENST00000489656 ANKRD13AQ8IZ07 590 aa16.3■□□□□ 0.2
VPS26A-205ENST00000489656 SPICE1Q8N0Z3 855 aa16.3■□□□□ 0.2
VPS26A-205ENST00000489656 PIBF1Q8WXW3 757 aa16.3■□□□□ 0.2
VPS26A-205ENST00000489656 VAT1LQ9HCJ6 419 aa16.3■□□□□ 0.2
VPS26A-205ENST00000489656 BRMS1Q9HCU9 246 aa16.3■□□□□ 0.2
VPS26A-205ENST00000489656 FEM1BQ9UK73 627 aa16.3■□□□□ 0.2
VPS26A-205ENST00000489656 AFG3L2Q9Y4W6 797 aa16.3■□□□□ 0.2
VPS26A-205ENST00000489656 ZHX2Q9Y6X8 837 aa16.3■□□□□ 0.2
VPS26A-205ENST00000489656 A0A0G2JMZ2 1700 aa16.3■□□□□ 0.2
VPS26A-205ENST00000489656 MTMR2Q13614 643 aa16.29■□□□□ 0.2
VPS26A-205ENST00000489656 PRKG1Q13976 671 aa16.29■□□□□ 0.2
VPS26A-205ENST00000489656 SH3D19Q5HYK7 790 aa16.29■□□□□ 0.2
VPS26A-205ENST00000489656 MYSM1Q5VVJ2 828 aa16.29■□□□□ 0.2
VPS26A-205ENST00000489656 MAP1SQ66K74 1059 aaPredicted RBP16.29■□□□□ 0.2
VPS26A-205ENST00000489656 TYW1BQ6NUM6 668 aa16.29■□□□□ 0.2
VPS26A-205ENST00000489656 HEATR3Q7Z4Q2 680 aa16.29■□□□□ 0.2
VPS26A-205ENST00000489656 HOMER1Q86YM7 354 aa16.29■□□□□ 0.2
VPS26A-205ENST00000489656 NOSTRINQ8IVI9 506 aa16.29■□□□□ 0.2
VPS26A-205ENST00000489656 RBM46Q8TBY0 533 aaKnown RBP16.29■□□□□ 0.2
VPS26A-205ENST00000489656 GPKOWQ92917 476 aaPredicted RBP eCLIP16.29■□□□□ 0.22e-6■■□□□ 13
VPS26A-205ENST00000489656 ZNF396Q96N95 335 aaPredicted RBP16.29■□□□□ 0.2
VPS26A-205ENST00000489656 ZMYND12Q9H0C1 365 aa16.29■□□□□ 0.2
VPS26A-205ENST00000489656 NMRK2Q9NPI5 230 aa16.29■□□□□ 0.2
VPS26A-205ENST00000489656 EMILIN3Q9NT22 766 aa16.29■□□□□ 0.2
VPS26A-205ENST00000489656 BTBD18B2RXH4 712 aa16.28■□□□□ 0.2
VPS26A-205ENST00000489656 NLRP5P59047 1200 aa16.28■□□□□ 0.2
VPS26A-205ENST00000489656 FKBP1BP68106 108 aa16.28■□□□□ 0.2
VPS26A-205ENST00000489656 GNL2Q13823 731 aaKnown RBP16.28■□□□□ 0.2
VPS26A-205ENST00000489656 ZYXQ15942 572 aaKnown RBP16.28■□□□□ 0.2
VPS26A-205ENST00000489656 CDC37Q16543 378 aaPredicted RBP16.28■□□□□ 0.2
VPS26A-205ENST00000489656 CSPP1Q1MSJ5 1256 aa16.28■□□□□ 0.2
VPS26A-205ENST00000489656 QRICH1Q2TAL8 776 aa16.28■□□□□ 0.2
VPS26A-205ENST00000489656 LDLRAD1Q5T700 205 aa16.28■□□□□ 0.2
VPS26A-205ENST00000489656 FAM173BQ6P4H8 233 aa16.28■□□□□ 0.2
VPS26A-205ENST00000489656 ERO1BQ86YB8 467 aa16.28■□□□□ 0.2
VPS26A-205ENST00000489656 TNFRSF25Q93038 417 aa16.28■□□□□ 0.2
VPS26A-205ENST00000489656 CHAMP1Q96JM3 812 aa16.28■□□□□ 0.2
VPS26A-205ENST00000489656 SCAND2PQ9GZW5 306 aaPredicted RBP16.28■□□□□ 0.2
VPS26A-205ENST00000489656 CFAP45Q9UL16 551 aa16.28■□□□□ 0.2
VPS26A-205ENST00000489656 PRR12Q9ULL5 1215 aa16.28■□□□□ 0.2
VPS26A-205ENST00000489656 ISY1Q9ULR0 285 aaKnown RBP16.28■□□□□ 0.2
VPS26A-205ENST00000489656 PCDHA4Q9UN74 947 aa16.28■□□□□ 0.2
VPS26A-205ENST00000489656 SSUH2Q9Y2M2 353 aa16.28■□□□□ 0.2
VPS26A-205ENST00000489656 ELP1O95163 1332 aa16.27■□□□□ 0.2
VPS26A-205ENST00000489656 SPDYE5A6NIY4 337 aa16.27■□□□□ 0.2
VPS26A-205ENST00000489656 M0R2N6 131 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms