RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 PLCD3Q8N3E9 789 aa9.66□□□□□ -0.86
EXOSC3-206ENST00000489414 AGBL1Q96MI9 1066 aa9.66□□□□□ -0.86
EXOSC3-206ENST00000489414 CHPF2Q9P2E5 772 aa9.66□□□□□ -0.86
EXOSC3-206ENST00000489414 ANKFY1Q9P2R3 1169 aa9.66□□□□□ -0.86
EXOSC3-206ENST00000489414 R4GN57 208 aa9.66□□□□□ -0.86
EXOSC3-206ENST00000489414 LINC01553A4QN01 128 aa9.65□□□□□ -0.86
EXOSC3-206ENST00000489414 ACTN1P12814 892 aa9.65□□□□□ -0.86
EXOSC3-206ENST00000489414 ADORA2AP29274 412 aa9.65□□□□□ -0.86
EXOSC3-206ENST00000489414 CLCN5P51795 746 aa9.65□□□□□ -0.86
EXOSC3-206ENST00000489414 LMNB2Q03252 620 aa9.65□□□□□ -0.86
EXOSC3-206ENST00000489414 CCDC105Q8IYK2 499 aa9.65□□□□□ -0.86
EXOSC3-206ENST00000489414 ZGPATQ8N5A5 531 aaKnown RBP9.65□□□□□ -0.86
EXOSC3-206ENST00000489414 NSUN3Q9H649 340 aaKnown RBP9.65□□□□□ -0.86
EXOSC3-206ENST00000489414 SPTA1P02549 2419 aa9.64□□□□□ -0.87
EXOSC3-206ENST00000489414 MAST3O60307 1309 aa9.64□□□□□ -0.87
EXOSC3-206ENST00000489414 MYADML2A6NDP7 307 aa9.64□□□□□ -0.87
EXOSC3-206ENST00000489414 COBLO75128 1261 aa9.64□□□□□ -0.87
EXOSC3-206ENST00000489414 TBX10O75333 385 aa9.64□□□□□ -0.87
EXOSC3-206ENST00000489414 EYA4O95677 639 aa9.64□□□□□ -0.87
EXOSC3-206ENST00000489414 ITGA6P23229 1130 aa9.64□□□□□ -0.87
EXOSC3-206ENST00000489414 CST5P28325 142 aaPredicted RBP9.64□□□□□ -0.87
EXOSC3-206ENST00000489414 MTMR2Q13614 643 aa9.64□□□□□ -0.87
EXOSC3-206ENST00000489414 SH3BP5LQ7L8J4 393 aa9.64□□□□□ -0.87
EXOSC3-206ENST00000489414 GPR161Q8N6U8 529 aaKnown RBP9.64□□□□□ -0.87
EXOSC3-206ENST00000489414 ADAM32Q8TC27 787 aa9.64□□□□□ -0.87
EXOSC3-206ENST00000489414 CWC25Q9NXE8 425 aaPredicted RBP9.64□□□□□ -0.87
EXOSC3-206ENST00000489414 CD207Q9UJ71 328 aa9.64□□□□□ -0.87
EXOSC3-206ENST00000489414 DOPEY1Q5JWR5 2465 aa9.64□□□□□ -0.87
EXOSC3-206ENST00000489414 TET1Q8NFU7 2136 aa9.64□□□□□ -0.87
EXOSC3-206ENST00000489414 SRRM3A6NNA2 597 aaPredicted RBP9.63□□□□□ -0.87
EXOSC3-206ENST00000489414 C1QTNF9BB2RNN3 333 aa9.63□□□□□ -0.87
EXOSC3-206ENST00000489414 ASGR1P07306 291 aa9.63□□□□□ -0.87
EXOSC3-206ENST00000489414 C1QTNF9P0C862 333 aa9.63□□□□□ -0.87
EXOSC3-206ENST00000489414 AKR1A1P14550 325 aa9.63□□□□□ -0.87
EXOSC3-206ENST00000489414 BACE1P56817 501 aa9.63□□□□□ -0.87
EXOSC3-206ENST00000489414 UNQ6494/PRO21346Q6UXR6 183 aa9.63□□□□□ -0.87
EXOSC3-206ENST00000489414 DEFB128Q7Z7B8 93 aa9.63□□□□□ -0.87
EXOSC3-206ENST00000489414 SLC43A3Q8NBI5 491 aa9.63□□□□□ -0.87
EXOSC3-206ENST00000489414 SUMF1Q8NBK3 374 aa9.63□□□□□ -0.87
EXOSC3-206ENST00000489414 FBXO22Q8NEZ5 403 aa9.63□□□□□ -0.87
EXOSC3-206ENST00000489414 TBC1D22AQ8WUA7 517 aa9.63□□□□□ -0.87
EXOSC3-206ENST00000489414 TMOD4Q9NZQ9 345 aa9.63□□□□□ -0.87
EXOSC3-206ENST00000489414 SALL1Q9NSC2 1324 aa9.62□□□□□ -0.87
EXOSC3-206ENST00000489414 USP17L5A8MUK1 530 aa9.62□□□□□ -0.87
EXOSC3-206ENST00000489414 GYG1P46976 350 aa9.62□□□□□ -0.87
EXOSC3-206ENST00000489414 ZNF200P98182 395 aaPredicted RBP9.62□□□□□ -0.87
EXOSC3-206ENST00000489414 VTI1AQ96AJ9 217 aa9.62□□□□□ -0.87
EXOSC3-206ENST00000489414 MAML3Q96JK9 1138 aa9.62□□□□□ -0.87
EXOSC3-206ENST00000489414 MYD88Q99836 296 aa9.62□□□□□ -0.87
EXOSC3-206ENST00000489414 OSBPL5Q9H0X9 879 aaPredicted RBP9.62□□□□□ -0.87
EXOSC3-206ENST00000489414 STRNO43815 780 aa9.61□□□□□ -0.87
EXOSC3-206ENST00000489414 ZNF865P0CJ78 1059 aaPredicted RBP9.61□□□□□ -0.87
EXOSC3-206ENST00000489414 TAL1P17542 331 aaPredicted RBP9.61□□□□□ -0.87
EXOSC3-206ENST00000489414 HIBADHP31937 336 aaKnown RBP9.61□□□□□ -0.87
EXOSC3-206ENST00000489414 NFE2L2Q16236 605 aa9.61□□□□□ -0.87
EXOSC3-206ENST00000489414 CWF19L1Q69YN2 538 aaKnown RBP9.61□□□□□ -0.87
EXOSC3-206ENST00000489414 TMCO2Q7Z6W1 182 aaPredicted RBP9.61□□□□□ -0.87
EXOSC3-206ENST00000489414 PCSK9Q8NBP7 692 aaKnown RBP9.61□□□□□ -0.87
EXOSC3-206ENST00000489414 PIK3R5Q8WYR1 880 aa9.61□□□□□ -0.87
EXOSC3-206ENST00000489414 MSLNLQ96KJ4 702 aa9.61□□□□□ -0.87
EXOSC3-206ENST00000489414 FAM84BQ96KN1 310 aaPredicted RBP9.61□□□□□ -0.87
EXOSC3-206ENST00000489414 C17orf80Q9BSJ5 609 aa9.61□□□□□ -0.87
EXOSC3-206ENST00000489414 POLR3GLQ9BT43 218 aa9.61□□□□□ -0.87
EXOSC3-206ENST00000489414 AS3MTQ9HBK9 375 aa9.61□□□□□ -0.87
EXOSC3-206ENST00000489414 TSPYL4Q9UJ04 414 aa9.61□□□□□ -0.87
EXOSC3-206ENST00000489414 SUGT1Q9Y2Z0 365 aa9.61□□□□□ -0.87
EXOSC3-206ENST00000489414 PIEZO2Q9H5I5 2752 aa9.6□□□□□ -0.87
EXOSC3-206ENST00000489414 TANC1Q9C0D5 1861 aa9.6□□□□□ -0.87
EXOSC3-206ENST00000489414 DDTLA6NHG4 134 aaPredicted RBP9.6□□□□□ -0.87
EXOSC3-206ENST00000489414 TBC1D12O60347 775 aa9.6□□□□□ -0.87
EXOSC3-206ENST00000489414 ENTPD3O75355 529 aa9.6□□□□□ -0.87
EXOSC3-206ENST00000489414 BAIAP3O94812 1187 aa9.6□□□□□ -0.87
EXOSC3-206ENST00000489414 ARP10275 920 aa9.6□□□□□ -0.87
EXOSC3-206ENST00000489414 DTWD2Q8NBA8 298 aa9.6□□□□□ -0.87
EXOSC3-206ENST00000489414 SMRP1Q8NCR6 262 aa9.6□□□□□ -0.87
EXOSC3-206ENST00000489414 RAD9AQ99638 391 aa9.6□□□□□ -0.87
EXOSC3-206ENST00000489414 WDR18Q9BV38 432 aa9.6□□□□□ -0.87
EXOSC3-206ENST00000489414 PHF7Q9BWX1 381 aaPredicted RBP9.6□□□□□ -0.87
EXOSC3-206ENST00000489414 CACNA2D2Q9NY47 1150 aa9.6□□□□□ -0.87
EXOSC3-206ENST00000489414 SLC5A4Q9NY91 659 aa9.6□□□□□ -0.87
EXOSC3-206ENST00000489414 BTBD7Q9P203 1132 aa9.6□□□□□ -0.87
EXOSC3-206ENST00000489414 MYO9AB2RTY4 2548 aa9.59□□□□□ -0.87
EXOSC3-206ENST00000489414 TEX15Q9BXT5 2789 aa9.59□□□□□ -0.87
EXOSC3-206ENST00000489414 ABCA12Q86UK0 2595 aa9.59□□□□□ -0.87
EXOSC3-206ENST00000489414 B4GALT4O60513 344 aa9.59□□□□□ -0.87
EXOSC3-206ENST00000489414 RGS3P49796 1198 aa9.59□□□□□ -0.87
EXOSC3-206ENST00000489414 IRX5P78411 483 aaPredicted RBP9.59□□□□□ -0.87
EXOSC3-206ENST00000489414 HYAL1Q12794 435 aa9.59□□□□□ -0.87
EXOSC3-206ENST00000489414 CHAF1AQ13111 956 aaPredicted RBP9.59□□□□□ -0.87
EXOSC3-206ENST00000489414 ZC3H14Q6PJT7 736 aaKnown RBP9.59□□□□□ -0.87
EXOSC3-206ENST00000489414 UBALD2Q8IYN6 164 aa9.59□□□□□ -0.87
EXOSC3-206ENST00000489414 TMEFF1Q8IYR6 380 aa9.59□□□□□ -0.87
EXOSC3-206ENST00000489414 RPGRIP1Q96KN7 1286 aa9.59□□□□□ -0.87
EXOSC3-206ENST00000489414 ZBED2Q9BTP6 218 aa9.59□□□□□ -0.87
EXOSC3-206ENST00000489414 IDI2Q9BXS1 227 aa9.59□□□□□ -0.87
EXOSC3-206ENST00000489414 TRPV6Q9H1D0 765 aa9.59□□□□□ -0.87
EXOSC3-206ENST00000489414 KNSTRNQ9Y448 316 aa9.59□□□□□ -0.87
EXOSC3-206ENST00000489414 MYO10Q9HD67 2058 aa9.59□□□□□ -0.87
EXOSC3-206ENST00000489414 KIF16BQ96L93 1317 aa9.58□□□□□ -0.88
EXOSC3-206ENST00000489414 ZNF316A6NFI3 1004 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms