RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 CYP46A1Q9Y6A2 500 aa14.54□□□□□ -0.08
COL4A5-206ENST00000489230 RBBP6Q7Z6E9 1792 aaKnown RBP14.54□□□□□ -0.08
COL4A5-206ENST00000489230 HTTP42858 3142 aa14.54□□□□□ -0.08
COL4A5-206ENST00000489230 CENPFP49454 3210 aa14.53□□□□□ -0.08
COL4A5-206ENST00000489230 VWA5AO00534 786 aa14.53□□□□□ -0.08
COL4A5-206ENST00000489230 FMNL1O95466 1100 aaPredicted RBP14.53□□□□□ -0.08
COL4A5-206ENST00000489230 SLC25A27O95847 323 aa14.53□□□□□ -0.08
COL4A5-206ENST00000489230 PARP1P09874 1014 aaKnown RBP14.53□□□□□ -0.08
COL4A5-206ENST00000489230 PDHBP11177 359 aa14.53□□□□□ -0.08
COL4A5-206ENST00000489230 MAPK4P31152 587 aa14.53□□□□□ -0.08
COL4A5-206ENST00000489230 KIF5BP33176 963 aa14.53□□□□□ -0.08
COL4A5-206ENST00000489230 COPB2P35606 906 aa14.53□□□□□ -0.08
COL4A5-206ENST00000489230 OAZ1P54368 228 aa14.53□□□□□ -0.08
COL4A5-206ENST00000489230 PRMT2P55345 433 aa14.53□□□□□ -0.08
COL4A5-206ENST00000489230 FCGRTP55899 365 aa14.53□□□□□ -0.08
COL4A5-206ENST00000489230 ANTXR2P58335 489 aa14.53□□□□□ -0.08
COL4A5-206ENST00000489230 ERVK-9P63128 1117 aa14.53□□□□□ -0.08
COL4A5-206ENST00000489230 ERVK-24P63145 666 aa14.53□□□□□ -0.08
COL4A5-206ENST00000489230 ZNF543Q08ER8 600 aa14.53□□□□□ -0.08
COL4A5-206ENST00000489230 ADCK5Q3MIX3 580 aa14.53□□□□□ -0.08
COL4A5-206ENST00000489230 SLC9C1Q4G0N8 1177 aa14.53□□□□□ -0.08
COL4A5-206ENST00000489230 BTNL9Q6UXG8 535 aa14.53□□□□□ -0.08
COL4A5-206ENST00000489230 FBXL16Q8N461 479 aa14.53□□□□□ -0.08
COL4A5-206ENST00000489230 KIFC2Q96AC6 838 aa14.53□□□□□ -0.08
COL4A5-206ENST00000489230 ZSWIM6Q9HCJ5 1215 aa14.53□□□□□ -0.08
COL4A5-206ENST00000489230 MTMR7Q9Y216 660 aa14.53□□□□□ -0.08
COL4A5-206ENST00000489230 SLC12A7Q9Y666 1083 aa14.53□□□□□ -0.08
COL4A5-206ENST00000489230 LOC285556D6RIA3 1793 aa14.52□□□□□ -0.08
COL4A5-206ENST00000489230 BRCA2P51587 3418 aa14.52□□□□□ -0.08
COL4A5-206ENST00000489230 SH2B2O14492 632 aaPredicted RBP14.52□□□□□ -0.09
COL4A5-206ENST00000489230 CASTP20810 708 aaKnown RBP14.52□□□□□ -0.09
COL4A5-206ENST00000489230 RPS6KB1P23443 525 aa14.52□□□□□ -0.09
COL4A5-206ENST00000489230 PSMC4P43686 418 aa14.52□□□□□ -0.09
COL4A5-206ENST00000489230 GNAQP50148 359 aa14.52□□□□□ -0.09
COL4A5-206ENST00000489230 PPP2R5BQ15173 497 aa14.52□□□□□ -0.09
COL4A5-206ENST00000489230 KCTD1Q719H9 257 aa14.52□□□□□ -0.09
COL4A5-206ENST00000489230 RUFY3Q7L099 469 aa14.52□□□□□ -0.09
COL4A5-206ENST00000489230 SGMS1Q86VZ5 419 aa14.52□□□□□ -0.09
COL4A5-206ENST00000489230 COA7Q96BR5 231 aa14.52□□□□□ -0.09
COL4A5-206ENST00000489230 ZNF333Q96JL9 665 aa14.52□□□□□ -0.09
COL4A5-206ENST00000489230 LZTS2Q9BRK4 669 aa14.52□□□□□ -0.09
COL4A5-206ENST00000489230 PAGR1Q9BTK6 254 aa14.52□□□□□ -0.09
COL4A5-206ENST00000489230 LY9Q9HBG7 655 aa14.52□□□□□ -0.09
COL4A5-206ENST00000489230 CWC22Q9HCG8 908 aaKnown RBP14.52□□□□□ -0.09
COL4A5-206ENST00000489230 PTPRFP10586 1907 aa14.52□□□□□ -0.09
COL4A5-206ENST00000489230 ATP2A1O14983 1001 aa14.51□□□□□ -0.09
COL4A5-206ENST00000489230 STRNO43815 780 aa14.51□□□□□ -0.09
COL4A5-206ENST00000489230 DDAH1O94760 285 aa14.51□□□□□ -0.09
COL4A5-206ENST00000489230 SEC24BO95487 1268 aa14.51□□□□□ -0.09
COL4A5-206ENST00000489230 STAT3P40763 770 aa14.51□□□□□ -0.09
COL4A5-206ENST00000489230 TRAF1Q13077 416 aa14.51□□□□□ -0.09
COL4A5-206ENST00000489230 Q3C1V9 767 aa14.51□□□□□ -0.09
COL4A5-206ENST00000489230 SAMD1Q6SPF0 538 aaPredicted RBP14.51□□□□□ -0.09
COL4A5-206ENST00000489230 SHCBP1Q8NEM2 672 aa14.51□□□□□ -0.09
COL4A5-206ENST00000489230 CTCFLQ8NI51 663 aaPredicted RBP14.51□□□□□ -0.09
COL4A5-206ENST00000489230 ATG4CQ96DT6 458 aa14.51□□□□□ -0.09
COL4A5-206ENST00000489230 IL17RAQ96F46 866 aa14.51□□□□□ -0.09
COL4A5-206ENST00000489230 SPATC1LQ9H0A9 340 aa14.51□□□□□ -0.09
COL4A5-206ENST00000489230 MROH8Q9H579 483 aa14.51□□□□□ -0.09
COL4A5-206ENST00000489230 SLC38A10Q9HBR0 1119 aa14.51□□□□□ -0.09
COL4A5-206ENST00000489230 GPCPD1Q9NPB8 672 aa14.51□□□□□ -0.09
COL4A5-206ENST00000489230 FBXO28Q9NVF7 368 aa14.51□□□□□ -0.09
COL4A5-206ENST00000489230 PTCH2Q9Y6C5 1203 aa14.51□□□□□ -0.09
COL4A5-206ENST00000489230 SMARCA1P28370 1054 aa14.5□□□□□ -0.09
COL4A5-206ENST00000489230 FXR1P51114 621 aaKnown RBP eCLIP14.5□□□□□ -0.09
COL4A5-206ENST00000489230 RCAN1P53805 252 aa14.5□□□□□ -0.09
COL4A5-206ENST00000489230 TROAPQ12815 778 aa14.5□□□□□ -0.09
COL4A5-206ENST00000489230 PLS1Q14651 629 aa14.5□□□□□ -0.09
COL4A5-206ENST00000489230 SYDE2Q5VT97 1194 aa14.5□□□□□ -0.09
COL4A5-206ENST00000489230 TEX13BQ9BXU2 312 aa14.5□□□□□ -0.09
COL4A5-206ENST00000489230 ALDH8A1Q9H2A2 487 aaPredicted RBP14.5□□□□□ -0.09
COL4A5-206ENST00000489230 TXNRD2Q9NNW7 524 aa14.5□□□□□ -0.09
COL4A5-206ENST00000489230 BTBD7Q9P203 1132 aa14.5□□□□□ -0.09
COL4A5-206ENST00000489230 PRR12Q9ULL5 1215 aa14.5□□□□□ -0.09
COL4A5-206ENST00000489230 CCDC196A0A1B0GTZ2 297 aa14.49□□□□□ -0.09
COL4A5-206ENST00000489230 PALM3A6NDB9 673 aaPredicted RBP14.49□□□□□ -0.09
COL4A5-206ENST00000489230 KLRF2D3W0D1 207 aa14.49□□□□□ -0.09
COL4A5-206ENST00000489230 TNPO2O14787 897 aaKnown RBP14.49□□□□□ -0.09
COL4A5-206ENST00000489230 CNMDO75829 334 aa14.49□□□□□ -0.09
COL4A5-206ENST00000489230 MYCP01106 439 aaPredicted RBP14.49□□□□□ -0.09
COL4A5-206ENST00000489230 CAP1Q01518 475 aa14.49□□□□□ -0.09
COL4A5-206ENST00000489230 GRM4Q14833 912 aa14.49□□□□□ -0.09
COL4A5-206ENST00000489230 TMEM132BQ14DG7 1078 aa14.49□□□□□ -0.09
COL4A5-206ENST00000489230 ANKRD1Q15327 319 aa14.49□□□□□ -0.09
COL4A5-206ENST00000489230 TKFCQ3LXA3 575 aa14.49□□□□□ -0.09
COL4A5-206ENST00000489230 Q6ZUG5 572 aa14.49□□□□□ -0.09
COL4A5-206ENST00000489230 RIOX2Q8IUF8 465 aa14.49□□□□□ -0.09
COL4A5-206ENST00000489230 ZNF654Q8IZM8 581 aa14.49□□□□□ -0.09
COL4A5-206ENST00000489230 NUP133Q8WUM0 1156 aa14.49□□□□□ -0.09
COL4A5-206ENST00000489230 CHMP4CQ96CF2 233 aa14.49□□□□□ -0.09
COL4A5-206ENST00000489230 C22orf23Q9BZE7 217 aa14.49□□□□□ -0.09
COL4A5-206ENST00000489230 PDRG1Q9NUG6 133 aa14.49□□□□□ -0.09
COL4A5-206ENST00000489230 FBXO40Q9UH90 709 aa14.49□□□□□ -0.09
COL4A5-206ENST00000489230 IVNS1ABPQ9Y6Y0 642 aa14.49□□□□□ -0.09
COL4A5-206ENST00000489230 MYH4Q9Y623 1939 aa14.49□□□□□ -0.09
COL4A5-206ENST00000489230 FRMPD2Q68DX3 1309 aaPredicted RBP14.48□□□□□ -0.09
COL4A5-206ENST00000489230 TTBK2Q6IQ55 1244 aa14.48□□□□□ -0.09
COL4A5-206ENST00000489230 POTEEQ6S8J3 1075 aa14.48□□□□□ -0.09
COL4A5-206ENST00000489230 PLEKHH3Q7Z736 793 aa14.48□□□□□ -0.09
COL4A5-206ENST00000489230 FANCBQ8NB91 859 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms