RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 ZRANB2O95218 330 aaKnown RBP eCLIP10.26□□□□□ -0.77
EXOSC1-211ENST00000489158 TUBB4AP04350 444 aa10.26□□□□□ -0.77
EXOSC1-211ENST00000489158 CDK11BP21127 795 aaKnown RBP10.26□□□□□ -0.77
EXOSC1-211ENST00000489158 KCNJ6P48051 423 aa10.26□□□□□ -0.77
EXOSC1-211ENST00000489158 TNNI2P48788 182 aa10.26□□□□□ -0.77
EXOSC1-211ENST00000489158 HNRNPH2P55795 449 aaKnown RBP10.26□□□□□ -0.77
EXOSC1-211ENST00000489158 NLRP12P59046 1061 aa10.26□□□□□ -0.77
EXOSC1-211ENST00000489158 TNFAIP1Q13829 316 aa10.26□□□□□ -0.77
EXOSC1-211ENST00000489158 STK38Q15208 465 aa10.26□□□□□ -0.77
EXOSC1-211ENST00000489158 SF3A1Q15459 793 aaKnown RBP10.26□□□□□ -0.77
EXOSC1-211ENST00000489158 OTUD7BQ6GQQ9 843 aa10.26□□□□□ -0.77
EXOSC1-211ENST00000489158 TMCO3Q6UWJ1 677 aa10.26□□□□□ -0.77
EXOSC1-211ENST00000489158 METTL16Q86W50 562 aaKnown RBP10.26□□□□□ -0.77
EXOSC1-211ENST00000489158 ZNF654Q8IZM8 581 aa10.26□□□□□ -0.77
EXOSC1-211ENST00000489158 CRACR2BQ8N4Y2 399 aaPredicted RBP10.26□□□□□ -0.77
EXOSC1-211ENST00000489158 RGS22Q8NE09 1264 aa10.26□□□□□ -0.77
EXOSC1-211ENST00000489158 FAM151AQ8WW52 585 aa10.26□□□□□ -0.77
EXOSC1-211ENST00000489158 UBXN4Q92575 508 aa10.26□□□□□ -0.77
EXOSC1-211ENST00000489158 CCDC17Q96LX7 622 aa10.26□□□□□ -0.77
EXOSC1-211ENST00000489158 VEZTQ9HBM0 779 aa10.26□□□□□ -0.77
EXOSC1-211ENST00000489158 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.26□□□□□ -0.77
EXOSC1-211ENST00000489158 HPS5Q9UPZ3 1129 aa10.26□□□□□ -0.77
EXOSC1-211ENST00000489158 CLIC4Q9Y696 253 aa10.26□□□□□ -0.77
EXOSC1-211ENST00000489158 ZNF541Q9H0D2 1346 aa10.26□□□□□ -0.77
EXOSC1-211ENST00000489158 A0A1W2PQ27 194 aa10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 A0A1W2PQ64 194 aa10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 A0A1W2PQD8 194 aa10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 VGLL3A8MV65 326 aa10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 TCP10L2B9ZVM9 353 aa10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 WNT10BO00744 389 aa10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 POLR3GO15318 223 aaPredicted RBP10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 GRIN3BO60391 1043 aa10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 YBX3P16989 372 aaKnown RBP eCLIP10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 ETF1P62495 437 aaKnown RBP10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 TPM4P67936 248 aa10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 NCAPHQ15003 741 aa10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 RBM26Q5T8P6 1007 aaKnown RBP10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 CATIPQ7Z7H3 387 aa10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 ZFPM1Q8IX07 1006 aa10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 LINC00301Q8NCQ3 95 aa10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 TRERF1Q96PN7 1200 aa10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 MAP3K14Q99558 947 aa10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 ARGLU1Q9NWB6 273 aaPredicted RBP10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 HERC5Q9UII4 1024 aaKnown RBP10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 STX8Q9UNK0 236 aa10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 PHLPP2Q6ZVD8 1323 aa10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 DDTLA6NHG4 134 aaPredicted RBP10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 H7C1D1 291 aa10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 SEC31AO94979 1220 aaKnown RBP10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 FDPSP14324 419 aaKnown RBP10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 LMOD1P29536 600 aaPredicted RBP10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 FANCCQ00597 558 aa10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 ISM2Q6H9L7 571 aa10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 MICALL2Q8IY33 904 aa10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 MNS1Q8NEH6 495 aa10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 RBM28Q9NW13 759 aaKnown RBP10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 CNOT7Q9UIV1 285 aaKnown RBP10.25□□□□□ -0.77
EXOSC1-211ENST00000489158 SHTN1A0MZ66 631 aa10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 TULP2O00295 520 aa10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 URI1O94763 535 aaPredicted RBP10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 CAPN2P17655 700 aa10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 CDC27P30260 824 aa10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 NOVP48745 357 aa10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 DHX8Q14562 1220 aaKnown RBP10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 RTN1Q16799 776 aa10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 TRIM65Q6PJ69 517 aa10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 CARD6Q9BX69 1037 aa10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 KAT14Q9H8E8 782 aa10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 RNF181Q9P0P0 153 aa10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 CNTNAP1P78357 1384 aa10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 STK36Q9NRP7 1315 aa10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 MPHOSPH10O00566 681 aaKnown RBP10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 SPTLC2O15270 562 aa10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 CCP110O43303 1012 aa10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 TADA3O75528 432 aa10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 ZNF202O95125 648 aa10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 ATP1A3P13637 1013 aa10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 SHMT1P34896 483 aa10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 GOLGA8FQ08AF8 430 aa10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 GOLGA8DPQ0D2H9 430 aa10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 KIF4BQ2VIQ3 1234 aa10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 NBPF9Q3BBW0 867 aa10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 IL17RBQ9NRM6 502 aa10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 GPRC5DQ9NZD1 345 aa10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 MTMR7Q9Y216 660 aa10.24□□□□□ -0.77
EXOSC1-211ENST00000489158 FAM196BA6NMK8 535 aa10.23□□□□□ -0.77
EXOSC1-211ENST00000489158 FANCGO15287 622 aa10.23□□□□□ -0.77
EXOSC1-211ENST00000489158 TBC1D12O60347 775 aa10.23□□□□□ -0.77
EXOSC1-211ENST00000489158 TEX35Q5T0J7 233 aa10.23□□□□□ -0.77
EXOSC1-211ENST00000489158 RCSD1Q6JBY9 416 aa10.23□□□□□ -0.77
EXOSC1-211ENST00000489158 TATDN1Q6P1N9 297 aa10.23□□□□□ -0.77
EXOSC1-211ENST00000489158 SH3BP5LQ7L8J4 393 aa10.23□□□□□ -0.77
EXOSC1-211ENST00000489158 CCDC82Q8N4S0 544 aa10.23□□□□□ -0.77
EXOSC1-211ENST00000489158 FANCBQ8NB91 859 aa10.23□□□□□ -0.77
EXOSC1-211ENST00000489158 CTCFLQ8NI51 663 aaPredicted RBP10.23□□□□□ -0.77
EXOSC1-211ENST00000489158 KCNG4Q8TDN1 519 aa10.23□□□□□ -0.77
EXOSC1-211ENST00000489158 PHKBQ93100 1093 aa10.23□□□□□ -0.77
EXOSC1-211ENST00000489158 CSRNP1Q96S65 589 aa10.23□□□□□ -0.77
EXOSC1-211ENST00000489158 EPC1Q9H2F5 836 aa10.23□□□□□ -0.77
EXOSC1-211ENST00000489158 IGKV6D-41A0A0C4DH26 115 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms