RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 LPAR1Q92633 364 aa11.52□□□□□ -0.57
USP11-211ENST00000489111 ZKSCAN4Q969J2 545 aaPredicted RBP11.52□□□□□ -0.57
USP11-211ENST00000489111 KLRG1Q96E93 195 aa11.52□□□□□ -0.57
USP11-211ENST00000489111 CDCA5Q96FF9 252 aa11.52□□□□□ -0.57
USP11-211ENST00000489111 KIAA1683Q9H0B3 1180 aa11.52□□□□□ -0.57
USP11-211ENST00000489111 JMJD4Q9H9V9 463 aa11.52□□□□□ -0.57
USP11-211ENST00000489111 TFIP11Q9UBB9 837 aaKnown RBP11.52□□□□□ -0.57
USP11-211ENST00000489111 CSADQ9Y600 493 aa11.52□□□□□ -0.57
USP11-211ENST00000489111 USP17L10C9JJH3 530 aa11.51□□□□□ -0.57
USP11-211ENST00000489111 TRAK2O60296 914 aa11.51□□□□□ -0.57
USP11-211ENST00000489111 MBD3O95983 291 aa11.51□□□□□ -0.57
USP11-211ENST00000489111 VEGFAP15692 232 aaPredicted RBP11.51□□□□□ -0.57
USP11-211ENST00000489111 PTPRAP18433 802 aa11.51□□□□□ -0.57
USP11-211ENST00000489111 CEBPZQ03701 1054 aaKnown RBP11.51□□□□□ -0.57
USP11-211ENST00000489111 MTMR2Q13614 643 aa11.51□□□□□ -0.57
USP11-211ENST00000489111 FAM160B2Q86V87 743 aa11.51□□□□□ -0.57
USP11-211ENST00000489111 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.51□□□□□ -0.57
USP11-211ENST00000489111 CHURC1Q8WUH1 139 aa11.51□□□□□ -0.57
USP11-211ENST00000489111 WDR18Q9BV38 432 aa11.51□□□□□ -0.57
USP11-211ENST00000489111 GLIS2Q9BZE0 524 aaPredicted RBP11.51□□□□□ -0.57
USP11-211ENST00000489111 C6orf50Q9HD87 102 aa11.51□□□□□ -0.57
USP11-211ENST00000489111 LMBRD1Q9NUN5 540 aa11.51□□□□□ -0.57
USP11-211ENST00000489111 NOL7Q9UMY1 257 aaKnown RBP11.51□□□□□ -0.57
USP11-211ENST00000489111 DDX49Q9Y6V7 483 aaKnown RBP11.51□□□□□ -0.57
USP11-211ENST00000489111 MYH8P13535 1937 aa11.5□□□□□ -0.57
USP11-211ENST00000489111 GOLGA6L4A6NEF3 574 aa11.5□□□□□ -0.57
USP11-211ENST00000489111 TRIM75PA6NK02 468 aa11.5□□□□□ -0.57
USP11-211ENST00000489111 WDR46O15213 610 aaKnown RBP11.5□□□□□ -0.57
USP11-211ENST00000489111 USP2O75604 605 aaPredicted RBP11.5□□□□□ -0.57
USP11-211ENST00000489111 GNA11P29992 359 aa11.5□□□□□ -0.57
USP11-211ENST00000489111 MAP3K9P80192 1104 aa11.5□□□□□ -0.57
USP11-211ENST00000489111 TRAF1Q13077 416 aa11.5□□□□□ -0.57
USP11-211ENST00000489111 NR5A1Q13285 461 aa11.5□□□□□ -0.57
USP11-211ENST00000489111 CDC37Q16543 378 aaPredicted RBP11.5□□□□□ -0.57
USP11-211ENST00000489111 BTNL9Q6UXG8 535 aa11.5□□□□□ -0.57
USP11-211ENST00000489111 BLIDQ8IZY5 108 aa11.5□□□□□ -0.57
USP11-211ENST00000489111 DAGLBQ8NCG7 672 aa11.5□□□□□ -0.57
USP11-211ENST00000489111 ZNF280CQ8ND82 737 aa11.5□□□□□ -0.57
USP11-211ENST00000489111 BICD2Q8TD16 824 aa11.5□□□□□ -0.57
USP11-211ENST00000489111 OXER1Q8TDS5 423 aa11.5□□□□□ -0.57
USP11-211ENST00000489111 LEO1Q8WVC0 666 aaPredicted RBP11.5□□□□□ -0.57
USP11-211ENST00000489111 SHISA4Q96DD7 197 aa11.5□□□□□ -0.57
USP11-211ENST00000489111 USP28Q96RU2 1077 aa11.5□□□□□ -0.57
USP11-211ENST00000489111 RTEL1Q9NZ71 1219 aa11.5□□□□□ -0.57
USP11-211ENST00000489111 FEM1BQ9UK73 627 aa11.5□□□□□ -0.57
USP11-211ENST00000489111 PCDHA4Q9UN74 947 aa11.5□□□□□ -0.57
USP11-211ENST00000489111 FZD1Q9UP38 647 aa11.5□□□□□ -0.57
USP11-211ENST00000489111 ZHX2Q9Y6X8 837 aa11.5□□□□□ -0.57
USP11-211ENST00000489111 ELP1O95163 1332 aa11.5□□□□□ -0.57
USP11-211ENST00000489111 WDR90Q96KV7 1748 aa11.49□□□□□ -0.57
USP11-211ENST00000489111 CCDC194A0A1B0GVG4 234 aa11.49□□□□□ -0.57
USP11-211ENST00000489111 ESYT2A0FGR8 921 aa11.49□□□□□ -0.57
USP11-211ENST00000489111 POTECB2RU33 542 aa11.49□□□□□ -0.57
USP11-211ENST00000489111 YEATS4O95619 227 aa11.49□□□□□ -0.57
USP11-211ENST00000489111 ADCY7P51828 1080 aa11.49□□□□□ -0.57
USP11-211ENST00000489111 UBE2HP62256 183 aa11.49□□□□□ -0.57
USP11-211ENST00000489111 SPP2Q13103 211 aa11.49□□□□□ -0.57
USP11-211ENST00000489111 VGLL4Q14135 290 aa11.49□□□□□ -0.57
USP11-211ENST00000489111 STK38Q15208 465 aa11.49□□□□□ -0.57
USP11-211ENST00000489111 SF3A1Q15459 793 aaKnown RBP11.49□□□□□ -0.57
USP11-211ENST00000489111 QRICH1Q2TAL8 776 aa11.49□□□□□ -0.57
USP11-211ENST00000489111 RILPL1Q5EBL4 403 aa11.49□□□□□ -0.57
USP11-211ENST00000489111 KIAA1755Q5JYT7 1200 aa11.49□□□□□ -0.57
USP11-211ENST00000489111 SAMD1Q6SPF0 538 aaPredicted RBP11.49□□□□□ -0.57
USP11-211ENST00000489111 DLK2Q6UY11 383 aa11.49□□□□□ -0.57
USP11-211ENST00000489111 ARMC9Q7Z3E5 817 aa11.49□□□□□ -0.57
USP11-211ENST00000489111 KCNG4Q8TDN1 519 aa11.49□□□□□ -0.57
USP11-211ENST00000489111 KIFC2Q96AC6 838 aa11.49□□□□□ -0.57
USP11-211ENST00000489111 MTMR8Q96EF0 704 aa11.49□□□□□ -0.57
USP11-211ENST00000489111 ANP32EQ9BTT0 268 aa11.49□□□□□ -0.57
USP11-211ENST00000489111 FTOQ9C0B1 505 aaKnown RBP eCLIP11.49□□□□□ -0.57
USP11-211ENST00000489111 TANGO6Q9C0B7 1094 aa11.49□□□□□ -0.57
USP11-211ENST00000489111 POLR3EQ9NVU0 708 aa11.49□□□□□ -0.57
USP11-211ENST00000489111 TMOD4Q9NZQ9 345 aa11.49□□□□□ -0.57
USP11-211ENST00000489111 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.49□□□□□ -0.57
USP11-211ENST00000489111 SNCAIPQ9Y6H5 919 aa11.49□□□□□ -0.57
USP11-211ENST00000489111 SMCO2A6NFE2 343 aa11.48□□□□□ -0.57
USP11-211ENST00000489111 PLA2G6O60733 806 aa11.48□□□□□ -0.57
USP11-211ENST00000489111 VCAM1P19320 739 aa11.48□□□□□ -0.57
USP11-211ENST00000489111 ME1P48163 572 aa11.48□□□□□ -0.57
USP11-211ENST00000489111 NASPP49321 788 aaPredicted RBP11.48□□□□□ -0.57
USP11-211ENST00000489111 BACE1P56817 501 aa11.48□□□□□ -0.57
USP11-211ENST00000489111 NPY5RQ15761 445 aa11.48□□□□□ -0.57
USP11-211ENST00000489111 KLHL40Q2TBA0 621 aa11.48□□□□□ -0.57
USP11-211ENST00000489111 TPRNQ4KMQ1 711 aa11.48□□□□□ -0.57
USP11-211ENST00000489111 ANO1Q5XXA6 986 aa11.48□□□□□ -0.57
USP11-211ENST00000489111 TYW1BQ6NUM6 668 aa11.48□□□□□ -0.57
USP11-211ENST00000489111 KRT25Q7Z3Z0 450 aa11.48□□□□□ -0.57
USP11-211ENST00000489111 LDHDQ86WU2 507 aa11.48□□□□□ -0.57
USP11-211ENST00000489111 FBXO11Q86XK2 927 aa11.48□□□□□ -0.57
USP11-211ENST00000489111 ANKRD13AQ8IZ07 590 aa11.48□□□□□ -0.57
USP11-211ENST00000489111 REXO1Q8N1G1 1221 aaKnown RBP11.48□□□□□ -0.57
USP11-211ENST00000489111 JMYQ8N9B5 988 aa11.48□□□□□ -0.57
USP11-211ENST00000489111 RBM46Q8TBY0 533 aaKnown RBP11.48□□□□□ -0.57
USP11-211ENST00000489111 COA7Q96BR5 231 aa11.48□□□□□ -0.57
USP11-211ENST00000489111 AMNQ9BXJ7 453 aa11.48□□□□□ -0.57
USP11-211ENST00000489111 ZMYND12Q9H0C1 365 aa11.48□□□□□ -0.57
USP11-211ENST00000489111 GLT8D2Q9H1C3 349 aa11.48□□□□□ -0.57
USP11-211ENST00000489111 RRAGCQ9HB90 399 aa11.48□□□□□ -0.57
USP11-211ENST00000489111 PRR12Q9ULL5 1215 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms