RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.46□□□□□ -1.54
CCDC93-209ENST00000488908 RNF19AQ9NV58 838 aa5.46□□□□□ -1.54
CCDC93-209ENST00000488908 POLR3KQ9Y2Y1 108 aaPredicted RBP5.46□□□□□ -1.54
CCDC93-209ENST00000488908 FADS2P1A8MWK0 482 aa5.45□□□□□ -1.54
CCDC93-209ENST00000488908 F6X3S4 739 aa5.45□□□□□ -1.54
CCDC93-209ENST00000488908 NBPF9Q3BBW0 867 aa5.45□□□□□ -1.54
CCDC93-209ENST00000488908 HSF5Q4G112 596 aaPredicted RBP5.45□□□□□ -1.54
CCDC93-209ENST00000488908 KRTAP5-3Q6L8H2 238 aa5.45□□□□□ -1.54
CCDC93-209ENST00000488908 ZPBP2Q6X784 338 aa5.45□□□□□ -1.54
CCDC93-209ENST00000488908 USP31Q70CQ4 1352 aa5.44□□□□□ -1.54
CCDC93-209ENST00000488908 NUDT19A8MXV4 375 aa5.44□□□□□ -1.54
CCDC93-209ENST00000488908 BUB1BO60566 1050 aaPredicted RBP5.44□□□□□ -1.54
CCDC93-209ENST00000488908 UBOX5O94941 541 aa5.44□□□□□ -1.54
CCDC93-209ENST00000488908 PRAMEF1O95521 474 aa5.44□□□□□ -1.54
CCDC93-209ENST00000488908 RAG1P15918 1043 aa5.44□□□□□ -1.54
CCDC93-209ENST00000488908 PRKCAP17252 672 aa5.44□□□□□ -1.54
CCDC93-209ENST00000488908 CYP4F8P98187 520 aa5.44□□□□□ -1.54
CCDC93-209ENST00000488908 KCNA1Q09470 495 aa5.44□□□□□ -1.54
CCDC93-209ENST00000488908 MPP2Q14168 576 aa5.44□□□□□ -1.54
CCDC93-209ENST00000488908 EAPPQ56P03 285 aaPredicted RBP5.44□□□□□ -1.54
CCDC93-209ENST00000488908 REC114Q7Z4M0 266 aa5.44□□□□□ -1.54
CCDC93-209ENST00000488908 NLGN1Q8N2Q7 840 aa5.44□□□□□ -1.54
CCDC93-209ENST00000488908 RHOVQ96L33 236 aa5.44□□□□□ -1.54
CCDC93-209ENST00000488908 GPR55Q9Y2T6 319 aaPredicted RBP5.44□□□□□ -1.54
CCDC93-209ENST00000488908 PCDHA5Q9Y5H7 936 aa5.44□□□□□ -1.54
CCDC93-209ENST00000488908 SIGLEC6O43699 453 aa5.43□□□□□ -1.54
CCDC93-209ENST00000488908 GBP2P32456 591 aaPredicted RBP5.43□□□□□ -1.54
CCDC93-209ENST00000488908 KCNC1P48547 511 aa5.43□□□□□ -1.54
CCDC93-209ENST00000488908 CAP1Q01518 475 aa5.43□□□□□ -1.54
CCDC93-209ENST00000488908 RAD51AP2Q09MP3 1159 aa5.43□□□□□ -1.54
CCDC93-209ENST00000488908 PSMD2Q13200 908 aa5.43□□□□□ -1.54
CCDC93-209ENST00000488908 SNW1Q13573 536 aaKnown RBP5.43□□□□□ -1.54
CCDC93-209ENST00000488908 KIR3DS1Q14943 382 aa5.43□□□□□ -1.54
CCDC93-209ENST00000488908 ARSHQ5FYA8 562 aa5.43□□□□□ -1.54
CCDC93-209ENST00000488908 SNAP47Q5SQN1 464 aa5.43□□□□□ -1.54
CCDC93-209ENST00000488908 NBPF12Q5TAG4 269 aaPredicted RBP5.43□□□□□ -1.54
CCDC93-209ENST00000488908 RELL1Q8IUW5 271 aa5.43□□□□□ -1.54
CCDC93-209ENST00000488908 TP53I13Q8NBR0 393 aaPredicted RBP5.43□□□□□ -1.54
CCDC93-209ENST00000488908 TMEM74Q96NL1 305 aa5.43□□□□□ -1.54
CCDC93-209ENST00000488908 TNFRSF12AQ9NP84 129 aa5.43□□□□□ -1.54
CCDC93-209ENST00000488908 PARP2Q9UGN5 583 aa5.43□□□□□ -1.54
CCDC93-209ENST00000488908 A0A1W2PQ45 241 aaPredicted RBP5.42□□□□□ -1.54
CCDC93-209ENST00000488908 A0A1W2PQY0 241 aa5.42□□□□□ -1.54
CCDC93-209ENST00000488908 NCKAP1LP55160 1127 aa5.42□□□□□ -1.54
CCDC93-209ENST00000488908 DAB2P98082 770 aa5.42□□□□□ -1.54
CCDC93-209ENST00000488908 PWP1Q13610 501 aa5.42□□□□□ -1.54
CCDC93-209ENST00000488908 CBX2Q14781 532 aaPredicted RBP5.42□□□□□ -1.54
CCDC93-209ENST00000488908 RTP5Q14D33 572 aa5.42□□□□□ -1.54
CCDC93-209ENST00000488908 SLCO6A1Q86UG4 719 aa5.42□□□□□ -1.54
CCDC93-209ENST00000488908 NUP43Q8NFH3 380 aa5.42□□□□□ -1.54
CCDC93-209ENST00000488908 ERVK13-1Q9NX77 482 aa5.42□□□□□ -1.54
CCDC93-209ENST00000488908 CNOT11Q9UKZ1 510 aaKnown RBP5.42□□□□□ -1.54
CCDC93-209ENST00000488908 FFAR3O14843 346 aa5.41□□□□□ -1.54
CCDC93-209ENST00000488908 INSRRP14616 1297 aa5.41□□□□□ -1.54
CCDC93-209ENST00000488908 PFKLP17858 780 aa5.41□□□□□ -1.54
CCDC93-209ENST00000488908 SLURP1P55000 103 aa5.41□□□□□ -1.54
CCDC93-209ENST00000488908 FAM160A1Q05DH4 1040 aa5.41□□□□□ -1.54
CCDC93-209ENST00000488908 ZC3H14Q6PJT7 736 aaKnown RBP5.41□□□□□ -1.54
CCDC93-209ENST00000488908 RPTNQ6XPR3 784 aa5.41□□□□□ -1.54
CCDC93-209ENST00000488908 GOLM1Q8NBJ4 401 aa5.41□□□□□ -1.54
CCDC93-209ENST00000488908 EAF1Q96JC9 268 aaPredicted RBP5.41□□□□□ -1.54
CCDC93-209ENST00000488908 RSRP1Q9BUV0 290 aa5.41□□□□□ -1.54
CCDC93-209ENST00000488908 CDADC1Q9BWV3 514 aa5.41□□□□□ -1.54
CCDC93-209ENST00000488908 CHST7Q9NS84 486 aa5.41□□□□□ -1.54
CCDC93-209ENST00000488908 GMIPQ9P107 970 aa5.41□□□□□ -1.54
CCDC93-209ENST00000488908 ACSL6Q9UKU0 697 aa5.41□□□□□ -1.54
CCDC93-209ENST00000488908 PALD1Q9ULE6 856 aa5.41□□□□□ -1.54
CCDC93-209ENST00000488908 MYRFQ9Y2G1 1151 aa5.41□□□□□ -1.54
CCDC93-209ENST00000488908 PRICKLE3O43900 615 aaPredicted RBP5.4□□□□□ -1.54
CCDC93-209ENST00000488908 CTSHP09668 335 aa5.4□□□□□ -1.54
CCDC93-209ENST00000488908 MAPKAPK2P49137 400 aa5.4□□□□□ -1.54
CCDC93-209ENST00000488908 PUM1Q14671 1186 aaKnown RBP eCLIP5.4□□□□□ -1.54
CCDC93-209ENST00000488908 NR1I3Q14994 352 aa5.4□□□□□ -1.54
CCDC93-209ENST00000488908 CWF19L2Q2TBE0 894 aaKnown RBP5.4□□□□□ -1.54
CCDC93-209ENST00000488908 ZFYVE27Q5T4F4 411 aa5.4□□□□□ -1.54
CCDC93-209ENST00000488908 AEBP1Q8IUX7 1158 aa5.4□□□□□ -1.54
CCDC93-209ENST00000488908 CRELD1Q96HD1 420 aa5.4□□□□□ -1.54
CCDC93-209ENST00000488908 GPR20Q99678 358 aa5.4□□□□□ -1.54
CCDC93-209ENST00000488908 PRDM14Q9GZV8 571 aa5.4□□□□□ -1.54
CCDC93-209ENST00000488908 IRS2Q9Y4H2 1338 aa5.4□□□□□ -1.55
CCDC93-209ENST00000488908 ANKRD33BA6NCL7 494 aa5.39□□□□□ -1.55
CCDC93-209ENST00000488908 K7ESM1 405 aa5.39□□□□□ -1.55
CCDC93-209ENST00000488908 CLEC3AO75596 197 aa5.39□□□□□ -1.55
CCDC93-209ENST00000488908 ZNF205O95201 554 aa5.39□□□□□ -1.55
CCDC93-209ENST00000488908 IGFBP6P24592 240 aaPredicted RBP5.39□□□□□ -1.55
CCDC93-209ENST00000488908 BMP8BP34820 402 aa5.39□□□□□ -1.55
CCDC93-209ENST00000488908 LIMS1P48059 325 aa5.39□□□□□ -1.55
CCDC93-209ENST00000488908 XPCQ01831 940 aaPredicted RBP5.39□□□□□ -1.55
CCDC93-209ENST00000488908 TARBP2Q15633 366 aaKnown RBP5.39□□□□□ -1.55
CCDC93-209ENST00000488908 PLEKHN1Q494U1 663 aaPredicted RBP5.39□□□□□ -1.55
CCDC93-209ENST00000488908 UBXN11Q5T124 520 aa5.39□□□□□ -1.55
CCDC93-209ENST00000488908 HHIPL2Q6UWX4 724 aa5.39□□□□□ -1.55
CCDC93-209ENST00000488908 FAM196AQ6ZSG2 479 aa5.39□□□□□ -1.55
CCDC93-209ENST00000488908 FBXO27Q8NI29 283 aa5.39□□□□□ -1.55
CCDC93-209ENST00000488908 USP40Q9NVE5 1235 aa5.39□□□□□ -1.55
CCDC93-209ENST00000488908 IMPACTQ9P2X3 320 aa5.39□□□□□ -1.55
CCDC93-209ENST00000488908 MINPP1Q9UNW1 487 aa5.39□□□□□ -1.55
CCDC93-209ENST00000488908 A0A1W2PQ27 194 aa5.38□□□□□ -1.55
CCDC93-209ENST00000488908 A0A1W2PQ64 194 aa5.38□□□□□ -1.55
CCDC93-209ENST00000488908 A0A1W2PQC6 194 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms