RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 SIRT2Q8IXJ6 389 aa7.94□□□□□ -1.14
PTPN4-212ENST00000488896 ANKS4BQ8N8V4 417 aa7.94□□□□□ -1.14
PTPN4-212ENST00000488896 SLC38A3Q99624 504 aa7.94□□□□□ -1.14
PTPN4-212ENST00000488896 G6PC3Q9BUM1 346 aa7.94□□□□□ -1.14
PTPN4-212ENST00000488896 CDADC1Q9BWV3 514 aa7.94□□□□□ -1.14
PTPN4-212ENST00000488896 PCDHB10Q9UN67 800 aa7.94□□□□□ -1.14
PTPN4-212ENST00000488896 LTBP3Q9NS15 1303 aa7.94□□□□□ -1.14
PTPN4-212ENST00000488896 PSPNO60542 156 aa7.93□□□□□ -1.14
PTPN4-212ENST00000488896 GIPRP48546 466 aa7.93□□□□□ -1.14
PTPN4-212ENST00000488896 CHRNEQ04844 493 aa7.93□□□□□ -1.14
PTPN4-212ENST00000488896 MESP2Q0VG99 397 aa7.93□□□□□ -1.14
PTPN4-212ENST00000488896 SLC14A2Q15849 920 aa7.93□□□□□ -1.14
PTPN4-212ENST00000488896 PKN1Q16512 942 aa7.93□□□□□ -1.14
PTPN4-212ENST00000488896 GNPTABQ3T906 1256 aa7.93□□□□□ -1.14
PTPN4-212ENST00000488896 LINC01599Q8WXQ3 324 aa7.93□□□□□ -1.14
PTPN4-212ENST00000488896 MAP6Q96JE9 813 aa7.93□□□□□ -1.14
PTPN4-212ENST00000488896 ZNF214Q9UL59 606 aaPredicted RBP7.93□□□□□ -1.14
PTPN4-212ENST00000488896 CEP128Q6ZU80 1094 aa7.92□□□□□ -1.14
PTPN4-212ENST00000488896 LILRA2Q8N149 483 aa7.92□□□□□ -1.14
PTPN4-212ENST00000488896 FAM84AQ96KN4 292 aa7.92□□□□□ -1.14
PTPN4-212ENST00000488896 GP6Q9HCN6 339 aa7.92□□□□□ -1.14
PTPN4-212ENST00000488896 DCP1AQ9NPI6 582 aaPredicted RBP7.92□□□□□ -1.14
PTPN4-212ENST00000488896 ZNF281Q9Y2X9 895 aa7.92□□□□□ -1.14
PTPN4-212ENST00000488896 ZNF451Q9Y4E5 1061 aa7.92□□□□□ -1.14
PTPN4-212ENST00000488896 A0A1W2PQH9 124 aa7.91□□□□□ -1.14
PTPN4-212ENST00000488896 H0Y8X5 98 aa7.91□□□□□ -1.14
PTPN4-212ENST00000488896 ZNF445P59923 1031 aa7.91□□□□□ -1.14
PTPN4-212ENST00000488896 CWF19L1Q69YN2 538 aaKnown RBP7.91□□□□□ -1.14
PTPN4-212ENST00000488896 SYDE1Q6ZW31 735 aaPredicted RBP7.91□□□□□ -1.14
PTPN4-212ENST00000488896 SMARCC1Q92922 1105 aaPredicted RBP7.91□□□□□ -1.14
PTPN4-212ENST00000488896 ANAPC16Q96DE5 110 aa7.91□□□□□ -1.14
PTPN4-212ENST00000488896 SHDQ96IW2 340 aa7.91□□□□□ -1.14
PTPN4-212ENST00000488896 HHIPL1Q96JK4 782 aa7.91□□□□□ -1.14
PTPN4-212ENST00000488896 EPB41L4BQ9H329 900 aa7.91□□□□□ -1.14
PTPN4-212ENST00000488896 CAPN10Q9HC96 672 aa7.91□□□□□ -1.14
PTPN4-212ENST00000488896 AP5S1Q9NUS5 200 aa7.91□□□□□ -1.14
PTPN4-212ENST00000488896 GSTM1P09488 218 aa7.9□□□□□ -1.14
PTPN4-212ENST00000488896 VAV1P15498 845 aa7.9□□□□□ -1.14
PTPN4-212ENST00000488896 TCF3P15923 654 aa7.9□□□□□ -1.14
PTPN4-212ENST00000488896 CD247P20963 164 aa7.9□□□□□ -1.14
PTPN4-212ENST00000488896 BMP8BP34820 402 aa7.9□□□□□ -1.14
PTPN4-212ENST00000488896 PDE6BP35913 854 aa7.9□□□□□ -1.14
PTPN4-212ENST00000488896 NR0B2Q15466 257 aa7.9□□□□□ -1.14
PTPN4-212ENST00000488896 LCE3BQ5TA77 95 aa7.9□□□□□ -1.14
PTPN4-212ENST00000488896 OR6P1Q8NGX9 317 aa7.9□□□□□ -1.14
PTPN4-212ENST00000488896 NOL6Q9H6R4 1146 aaKnown RBP7.9□□□□□ -1.14
PTPN4-212ENST00000488896 PODXL2Q9NZ53 605 aa7.9□□□□□ -1.14
PTPN4-212ENST00000488896 NOTOA8MTQ0 251 aa7.89□□□□□ -1.15
PTPN4-212ENST00000488896 ZNF205O95201 554 aa7.89□□□□□ -1.15
PTPN4-212ENST00000488896 GSNP06396 782 aa7.89□□□□□ -1.15
PTPN4-212ENST00000488896 RTP1P59025 263 aa7.89□□□□□ -1.15
PTPN4-212ENST00000488896 PPP2R5DQ14738 602 aa7.89□□□□□ -1.15
PTPN4-212ENST00000488896 TCEAL1Q15170 157 aa7.89□□□□□ -1.15
PTPN4-212ENST00000488896 FIBCD1Q8N539 461 aa7.89□□□□□ -1.15
PTPN4-212ENST00000488896 FAM169BQ8N8A8 192 aa7.89□□□□□ -1.15
PTPN4-212ENST00000488896 ADCY4Q8NFM4 1077 aa7.89□□□□□ -1.15
PTPN4-212ENST00000488896 SEC16BQ96JE7 1060 aa7.89□□□□□ -1.15
PTPN4-212ENST00000488896 ZDHHC15Q96MV8 337 aa7.89□□□□□ -1.15
PTPN4-212ENST00000488896 GPR55Q9Y2T6 319 aaPredicted RBP7.89□□□□□ -1.15
PTPN4-212ENST00000488896 YBX2Q9Y2T7 364 aaKnown RBP7.89□□□□□ -1.15
PTPN4-212ENST00000488896 SLC12A7Q9Y666 1083 aa7.89□□□□□ -1.15
PTPN4-212ENST00000488896 EFEMP2O95967 443 aa7.88□□□□□ -1.15
PTPN4-212ENST00000488896 ITGA4P13612 1032 aa7.88□□□□□ -1.15
PTPN4-212ENST00000488896 SLC7A5Q01650 507 aa7.88□□□□□ -1.15
PTPN4-212ENST00000488896 ANKRD39Q53RE8 183 aa7.88□□□□□ -1.15
PTPN4-212ENST00000488896 ADAT2Q7Z6V5 191 aaKnown RBP7.88□□□□□ -1.15
PTPN4-212ENST00000488896 ZNF605Q86T29 641 aa7.88□□□□□ -1.15
PTPN4-212ENST00000488896 KRTAP1-3Q8IUG1 177 aa7.88□□□□□ -1.15
PTPN4-212ENST00000488896 FBXO15Q8NCQ5 510 aaPredicted RBP7.88□□□□□ -1.15
PTPN4-212ENST00000488896 INTS4Q96HW7 963 aaKnown RBP7.88□□□□□ -1.15
PTPN4-212ENST00000488896 FCRL2Q96LA5 508 aaPredicted RBP7.88□□□□□ -1.15
PTPN4-212ENST00000488896 FGD4Q96M96 766 aa7.88□□□□□ -1.15
PTPN4-212ENST00000488896 HAUS7Q99871 368 aa7.88□□□□□ -1.15
PTPN4-212ENST00000488896 SLC6A17Q9H1V8 727 aa7.88□□□□□ -1.15
PTPN4-212ENST00000488896 PHAXQ9H814 394 aaKnown RBP7.88□□□□□ -1.15
PTPN4-212ENST00000488896 CWC22Q9HCG8 908 aaKnown RBP7.88□□□□□ -1.15
PTPN4-212ENST00000488896 PRR13Q9NZ81 148 aa7.88□□□□□ -1.15
PTPN4-212ENST00000488896 FHOD1Q9Y613 1164 aa7.88□□□□□ -1.15
PTPN4-212ENST00000488896 MRVI1Q9Y6F6 885 aa7.88□□□□□ -1.15
PTPN4-212ENST00000488896 CBFA2T2O43439 604 aa7.87□□□□□ -1.15
PTPN4-212ENST00000488896 SDHBP21912 280 aa7.87□□□□□ -1.15
PTPN4-212ENST00000488896 KIR2DL1P43626 348 aaPredicted RBP7.87□□□□□ -1.15
PTPN4-212ENST00000488896 KIR2DL2P43627 348 aaPredicted RBP7.87□□□□□ -1.15
PTPN4-212ENST00000488896 KIR3DS1Q14943 382 aa7.87□□□□□ -1.15
PTPN4-212ENST00000488896 HEATR6Q6AI08 1181 aaKnown RBP7.87□□□□□ -1.15
PTPN4-212ENST00000488896 NAT16Q8N8M0 369 aa7.87□□□□□ -1.15
PTPN4-212ENST00000488896 C19orf47Q8N9M1 422 aaKnown RBP7.87□□□□□ -1.15
PTPN4-212ENST00000488896 SHISA4Q96DD7 197 aa7.87□□□□□ -1.15
PTPN4-212ENST00000488896 PLCD4Q9BRC7 762 aa7.87□□□□□ -1.15
PTPN4-212ENST00000488896 SLC12A9Q9BXP2 914 aa7.87□□□□□ -1.15
PTPN4-212ENST00000488896 ERVK13-1Q9NX77 482 aa7.87□□□□□ -1.15
PTPN4-212ENST00000488896 NRDCO43847 1150 aa7.86□□□□□ -1.15
PTPN4-212ENST00000488896 ATF4P18848 351 aaPredicted RBP7.86□□□□□ -1.15
PTPN4-212ENST00000488896 SNX17Q15036 470 aa7.86□□□□□ -1.15
PTPN4-212ENST00000488896 RTP2Q5QGT7 225 aa7.86□□□□□ -1.15
PTPN4-212ENST00000488896 ADGRF1Q5T601 910 aa7.86□□□□□ -1.15
PTPN4-212ENST00000488896 NLRX1Q86UT6 975 aa7.86□□□□□ -1.15
PTPN4-212ENST00000488896 VPS37DQ86XT2 251 aa7.86□□□□□ -1.15
PTPN4-212ENST00000488896 TNFRSF10DQ9UBN6 386 aa7.86□□□□□ -1.15
PTPN4-212ENST00000488896 FADS2P1A8MWK0 482 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms