RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 M0R2N6 131 aa12.35□□□□□ -0.43
USP11-209ENST00000488848 STXBP3O00186 592 aa12.35□□□□□ -0.43
USP11-209ENST00000488848 GOLGA8HP0CJ92 632 aa12.35□□□□□ -0.43
USP11-209ENST00000488848 VCAM1P19320 739 aa12.35□□□□□ -0.43
USP11-209ENST00000488848 CALML3P27482 149 aa12.35□□□□□ -0.43
USP11-209ENST00000488848 GHRHRQ02643 423 aa12.35□□□□□ -0.43
USP11-209ENST00000488848 SYDE2Q5VT97 1194 aa12.35□□□□□ -0.43
USP11-209ENST00000488848 MAP1SQ66K74 1059 aaPredicted RBP12.35□□□□□ -0.43
USP11-209ENST00000488848 PRRT2Q7Z6L0 340 aaPredicted RBP12.35□□□□□ -0.43
USP11-209ENST00000488848 ADGRF4Q8IZF3 695 aa12.35□□□□□ -0.43
USP11-209ENST00000488848 CMTR1Q8N1G2 835 aaKnown RBP12.35□□□□□ -0.43
USP11-209ENST00000488848 CCDC12Q8WUD4 166 aaPredicted RBP12.35□□□□□ -0.43
USP11-209ENST00000488848 TNFRSF25Q93038 417 aa12.35□□□□□ -0.43
USP11-209ENST00000488848 GLT8D2Q9H1C3 349 aa12.35□□□□□ -0.43
USP11-209ENST00000488848 ADAMTS5Q9UNA0 930 aa12.35□□□□□ -0.43
USP11-209ENST00000488848 UBE2Q2LH0YL09 131 aa12.34□□□□□ -0.43
USP11-209ENST00000488848 H3BQV1 296 aa12.34□□□□□ -0.43
USP11-209ENST00000488848 ATP2B2Q01814 1243 aa12.34□□□□□ -0.43
USP11-209ENST00000488848 MTMR2Q13614 643 aa12.34□□□□□ -0.43
USP11-209ENST00000488848 CCDC96Q2M329 555 aa12.34□□□□□ -0.43
USP11-209ENST00000488848 WWC2Q6AWC2 1192 aa12.34□□□□□ -0.43
USP11-209ENST00000488848 LBX2Q6XYB7 198 aa12.34□□□□□ -0.43
USP11-209ENST00000488848 KCTD1Q719H9 257 aa12.34□□□□□ -0.43
USP11-209ENST00000488848 AIFM3Q96NN9 605 aa12.34□□□□□ -0.43
USP11-209ENST00000488848 FEZ1Q99689 392 aa12.34□□□□□ -0.43
USP11-209ENST00000488848 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.34□□□□□ -0.43
USP11-209ENST00000488848 SEC63Q9UGP8 760 aaKnown RBP12.34□□□□□ -0.43
USP11-209ENST00000488848 ZHX2Q9Y6X8 837 aa12.34□□□□□ -0.43
USP11-209ENST00000488848 FRMPD2Q68DX3 1309 aaPredicted RBP12.34□□□□□ -0.43
USP11-209ENST00000488848 VPS37CA5D8V6 355 aaPredicted RBP12.33□□□□□ -0.44
USP11-209ENST00000488848 TMEM232C9JQI7 657 aa12.33□□□□□ -0.44
USP11-209ENST00000488848 KIF3CO14782 793 aa12.33□□□□□ -0.44
USP11-209ENST00000488848 IRF6O14896 467 aa12.33□□□□□ -0.44
USP11-209ENST00000488848 ATP2A1O14983 1001 aa12.33□□□□□ -0.44
USP11-209ENST00000488848 HOXA7P31268 230 aaPredicted RBP12.33□□□□□ -0.44
USP11-209ENST00000488848 OAZ1P54368 228 aa12.33□□□□□ -0.44
USP11-209ENST00000488848 SPP2Q13103 211 aa12.33□□□□□ -0.44
USP11-209ENST00000488848 TRIM29Q14134 588 aa12.33□□□□□ -0.44
USP11-209ENST00000488848 FAM83BQ5T0W9 1011 aa12.33□□□□□ -0.44
USP11-209ENST00000488848 TTBK2Q6IQ55 1244 aa12.33□□□□□ -0.44
USP11-209ENST00000488848 TYW1BQ6NUM6 668 aa12.33□□□□□ -0.44
USP11-209ENST00000488848 DLK2Q6UY11 383 aa12.33□□□□□ -0.44
USP11-209ENST00000488848 PRPF38AQ8NAV1 312 aaKnown RBP12.33□□□□□ -0.44
USP11-209ENST00000488848 GBP4Q96PP9 640 aa12.33□□□□□ -0.44
USP11-209ENST00000488848 PIGSQ96S52 555 aa12.33□□□□□ -0.44
USP11-209ENST00000488848 GBA2Q9HCG7 927 aaPredicted RBP12.33□□□□□ -0.44
USP11-209ENST00000488848 PPP1R9AQ9ULJ8 1098 aa12.33□□□□□ -0.44
USP11-209ENST00000488848 PRR12Q9ULL5 1215 aa12.33□□□□□ -0.44
USP11-209ENST00000488848 CLEC11AQ9Y240 323 aa12.33□□□□□ -0.44
USP11-209ENST00000488848 ELP1O95163 1332 aa12.33□□□□□ -0.44
USP11-209ENST00000488848 RBBP6Q7Z6E9 1792 aaKnown RBP12.33□□□□□ -0.44
USP11-209ENST00000488848 TCHHQ07283 1943 aa12.33□□□□□ -0.44
USP11-209ENST00000488848 TRAF5O00463 557 aa12.32□□□□□ -0.44
USP11-209ENST00000488848 PPP1R11O60927 126 aaPredicted RBP12.32□□□□□ -0.44
USP11-209ENST00000488848 BAG4O95429 457 aaKnown RBP12.32□□□□□ -0.44
USP11-209ENST00000488848 ZBTB48P10074 688 aaPredicted RBP12.32□□□□□ -0.44
USP11-209ENST00000488848 TRAPPC10P48553 1259 aa12.32□□□□□ -0.44
USP11-209ENST00000488848 MOGSQ13724 837 aa12.32□□□□□ -0.44
USP11-209ENST00000488848 SAFBQ15424 915 aaKnown RBP eCLIP12.32□□□□□ -0.44
USP11-209ENST00000488848 CDC37Q16543 378 aaPredicted RBP12.32□□□□□ -0.44
USP11-209ENST00000488848 QRICH1Q2TAL8 776 aa12.32□□□□□ -0.44
USP11-209ENST00000488848 MCTP2Q6DN12 878 aa12.32□□□□□ -0.44
USP11-209ENST00000488848 CCDC84Q86UT8 332 aaPredicted RBP12.32□□□□□ -0.44
USP11-209ENST00000488848 NOSTRINQ8IVI9 506 aa12.32□□□□□ -0.44
USP11-209ENST00000488848 DIS3L2Q8IYB7 885 aaKnown RBP12.32□□□□□ -0.44
USP11-209ENST00000488848 SAMD3Q8N6K7 520 aa12.32□□□□□ -0.44
USP11-209ENST00000488848 HHIPL1Q96JK4 782 aa12.32□□□□□ -0.44
USP11-209ENST00000488848 SLF1Q9BQI6 1058 aa12.32□□□□□ -0.44
USP11-209ENST00000488848 UBA5Q9GZZ9 404 aa12.32□□□□□ -0.44
USP11-209ENST00000488848 SLC38A10Q9HBR0 1119 aa12.32□□□□□ -0.44
USP11-209ENST00000488848 GPCPD1Q9NPB8 672 aa12.32□□□□□ -0.44
USP11-209ENST00000488848 SLC45A1Q9Y2W3 748 aa12.32□□□□□ -0.44
USP11-209ENST00000488848 KIF28PB7ZC32 967 aa12.31□□□□□ -0.44
USP11-209ENST00000488848 PIK3CDO00329 1044 aa12.31□□□□□ -0.44
USP11-209ENST00000488848 PTMSP20962 102 aa12.31□□□□□ -0.44
USP11-209ENST00000488848 GNA11P29992 359 aa12.31□□□□□ -0.44
USP11-209ENST00000488848 MYSM1Q5VVJ2 828 aa12.31□□□□□ -0.44
USP11-209ENST00000488848 CATSPERGQ6ZRH7 1159 aa12.31□□□□□ -0.44
USP11-209ENST00000488848 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.31□□□□□ -0.44
USP11-209ENST00000488848 SPICE1Q8N0Z3 855 aa12.31□□□□□ -0.44
USP11-209ENST00000488848 CCDC82Q8N4S0 544 aa12.31□□□□□ -0.44
USP11-209ENST00000488848 REPS2Q8NFH8 660 aa12.31□□□□□ -0.44
USP11-209ENST00000488848 BICD2Q8TD16 824 aa12.31□□□□□ -0.44
USP11-209ENST00000488848 CLMNQ96JQ2 1002 aa12.31□□□□□ -0.44
USP11-209ENST00000488848 NUP88Q99567 741 aaPredicted RBP12.31□□□□□ -0.44
USP11-209ENST00000488848 AMNQ9BXJ7 453 aa12.31□□□□□ -0.44
USP11-209ENST00000488848 CPVLQ9H3G5 476 aa12.31□□□□□ -0.44
USP11-209ENST00000488848 BRMS1Q9HCU9 246 aa12.31□□□□□ -0.44
USP11-209ENST00000488848 VPS54Q9P1Q0 977 aa12.31□□□□□ -0.44
USP11-209ENST00000488848 PCDHA4Q9UN74 947 aa12.31□□□□□ -0.44
USP11-209ENST00000488848 FZD1Q9UP38 647 aa12.31□□□□□ -0.44
USP11-209ENST00000488848 USP17L15C9J2P7 530 aa12.3□□□□□ -0.44
USP11-209ENST00000488848 USP17L13C9JLJ4 530 aa12.3□□□□□ -0.44
USP11-209ENST00000488848 USP17L11C9JVI0 530 aa12.3□□□□□ -0.44
USP11-209ENST00000488848 USP17L18D6R9N7 530 aa12.3□□□□□ -0.44
USP11-209ENST00000488848 USP17L22D6RA61 530 aa12.3□□□□□ -0.44
USP11-209ENST00000488848 USP17L17D6RBQ6 530 aa12.3□□□□□ -0.44
USP11-209ENST00000488848 USP17L19D6RCP7 530 aa12.3□□□□□ -0.44
USP11-209ENST00000488848 USP17L20D6RJB6 530 aa12.3□□□□□ -0.44
USP11-209ENST00000488848 ICAM1P05362 532 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms