RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 SLC15A5A6NIM6 579 aa17.66■□□□□ 0.42
CXCL12-207ENST00000488591 STRNO43815 780 aa17.66■□□□□ 0.42
CXCL12-207ENST00000488591 REC8O95072 547 aa17.66■□□□□ 0.42
CXCL12-207ENST00000488591 IFIT1BQ5T764 474 aaKnown RBP17.66■□□□□ 0.42
CXCL12-207ENST00000488591 CYB5R4Q7L1T6 521 aa17.66■□□□□ 0.42
CXCL12-207ENST00000488591 PNMA1Q8ND90 353 aa17.66■□□□□ 0.42
CXCL12-207ENST00000488591 PXYLP1Q8TE99 480 aa17.66■□□□□ 0.42
CXCL12-207ENST00000488591 IFIT3O14879 490 aaKnown RBP17.65■□□□□ 0.42
CXCL12-207ENST00000488591 ZKSCAN1P17029 563 aaPredicted RBP17.65■□□□□ 0.42
CXCL12-207ENST00000488591 ERCC3P19447 782 aa17.65■□□□□ 0.42
CXCL12-207ENST00000488591 PTPREP23469 700 aa17.65■□□□□ 0.42
CXCL12-207ENST00000488591 RGS2P41220 211 aa17.65■□□□□ 0.42
CXCL12-207ENST00000488591 UBXN2AP68543 259 aa17.65■□□□□ 0.42
CXCL12-207ENST00000488591 STOX1Q6ZVD7 989 aa17.65■□□□□ 0.42
CXCL12-207ENST00000488591 RIOX2Q8IUF8 465 aa17.65■□□□□ 0.42
CXCL12-207ENST00000488591 CPXCR1Q8N123 301 aa17.65■□□□□ 0.42
CXCL12-207ENST00000488591 SH3TC2Q8TF17 1288 aa17.65■□□□□ 0.42
CXCL12-207ENST00000488591 TEX13BQ9BXU2 312 aa17.65■□□□□ 0.42
CXCL12-207ENST00000488591 SLC38A10Q9HBR0 1119 aa17.65■□□□□ 0.42
CXCL12-207ENST00000488591 TAF6LQ9Y6J9 622 aa17.65■□□□□ 0.42
CXCL12-207ENST00000488591 DOCK3Q8IZD9 2030 aa17.65■□□□□ 0.42
CXCL12-207ENST00000488591 COL11A1P12107 1806 aaPredicted RBP17.64■□□□□ 0.41
CXCL12-207ENST00000488591 PDHBP11177 359 aa17.64■□□□□ 0.41
CXCL12-207ENST00000488591 XRCC5P13010 732 aaKnown RBP17.64■□□□□ 0.41
CXCL12-207ENST00000488591 CYP2B6P20813 491 aa17.64■□□□□ 0.41
CXCL12-207ENST00000488591 OAZ1P54368 228 aa17.64■□□□□ 0.41
CXCL12-207ENST00000488591 MAP2K5Q13163 448 aa17.64■□□□□ 0.41
CXCL12-207ENST00000488591 MORN1Q5T089 497 aa17.64■□□□□ 0.41
CXCL12-207ENST00000488591 GPATCH4Q5T3I0 446 aaKnown RBP17.64■□□□□ 0.41
CXCL12-207ENST00000488591 TRMT44Q8IYL2 757 aaKnown RBP17.64■□□□□ 0.41
CXCL12-207ENST00000488591 REPS2Q8NFH8 660 aa17.64■□□□□ 0.41
CXCL12-207ENST00000488591 GPCPD1Q9NPB8 672 aa17.64■□□□□ 0.41
CXCL12-207ENST00000488591 ZNF214Q9UL59 606 aaPredicted RBP17.64■□□□□ 0.41
CXCL12-207ENST00000488591 FRMPD2Q68DX3 1309 aaPredicted RBP17.64■□□□□ 0.41
CXCL12-207ENST00000488591 ATP2A1O14983 1001 aa17.63■□□□□ 0.41
CXCL12-207ENST00000488591 FCER1AP12319 257 aa17.63■□□□□ 0.41
CXCL12-207ENST00000488591 MCM5P33992 734 aa17.63■□□□□ 0.41
CXCL12-207ENST00000488591 SLC4A3P48751 1232 aa17.63■□□□□ 0.41
CXCL12-207ENST00000488591 ZNF543Q08ER8 600 aa17.63■□□□□ 0.41
CXCL12-207ENST00000488591 WTAPQ15007 396 aa17.63■□□□□ 0.41
CXCL12-207ENST00000488591 SEC23AQ15436 765 aa17.63■□□□□ 0.41
CXCL12-207ENST00000488591 SNRNP48Q6IEG0 339 aaKnown RBP17.63■□□□□ 0.41
CXCL12-207ENST00000488591 ZNF333Q96JL9 665 aa17.63■□□□□ 0.41
CXCL12-207ENST00000488591 MTA3Q9BTC8 594 aa17.63■□□□□ 0.41
CXCL12-207ENST00000488591 TMEM106CQ9BVX2 250 aa17.63■□□□□ 0.41
CXCL12-207ENST00000488591 SLC5A4Q9NY91 659 aa17.63■□□□□ 0.41
CXCL12-207ENST00000488591 PRR12Q9ULL5 1215 aa17.63■□□□□ 0.41
CXCL12-207ENST00000488591 SNHG28P0DPA3 235 aa17.62■□□□□ 0.41
CXCL12-207ENST00000488591 ELNP15502 786 aa17.62■□□□□ 0.41
CXCL12-207ENST00000488591 GRB14Q14449 540 aa17.62■□□□□ 0.41
CXCL12-207ENST00000488591 KRT32Q14532 448 aa17.62■□□□□ 0.41
CXCL12-207ENST00000488591 TMEM67Q5HYA8 995 aa17.62■□□□□ 0.41
CXCL12-207ENST00000488591 BTNL9Q6UXG8 535 aa17.62■□□□□ 0.41
CXCL12-207ENST00000488591 RASGRP2Q7LDG7 609 aa17.62■□□□□ 0.41
CXCL12-207ENST00000488591 CHST3Q7LGC8 479 aa17.62■□□□□ 0.41
CXCL12-207ENST00000488591 DPP9Q86TI2 863 aa17.62■□□□□ 0.41
CXCL12-207ENST00000488591 MB21D2Q8IYB1 491 aaPredicted RBP17.62■□□□□ 0.41
CXCL12-207ENST00000488591 ABRAQ8N0Z2 381 aa17.62■□□□□ 0.41
CXCL12-207ENST00000488591 USP6NLQ92738 828 aa17.62■□□□□ 0.41
CXCL12-207ENST00000488591 APBA2Q99767 749 aa17.62■□□□□ 0.41
CXCL12-207ENST00000488591 RAVER2Q9HCJ3 691 aaKnown RBP17.62■□□□□ 0.41
CXCL12-207ENST00000488591 PRC1O43663 620 aa17.61■□□□□ 0.41
CXCL12-207ENST00000488591 PARP1P09874 1014 aaKnown RBP17.61■□□□□ 0.41
CXCL12-207ENST00000488591 SLC16A2P36021 539 aa17.61■□□□□ 0.41
CXCL12-207ENST00000488591 KCTD2Q14681 263 aa17.61■□□□□ 0.41
CXCL12-207ENST00000488591 TSGA10IPQ3SY00 556 aa17.61■□□□□ 0.41
CXCL12-207ENST00000488591 ASPRV1Q53RT3 343 aa17.61■□□□□ 0.41
CXCL12-207ENST00000488591 SYDE2Q5VT97 1194 aa17.61■□□□□ 0.41
CXCL12-207ENST00000488591 TTBK2Q6IQ55 1244 aa17.61■□□□□ 0.41
CXCL12-207ENST00000488591 MMP19Q99542 508 aa17.61■□□□□ 0.41
CXCL12-207ENST00000488591 FBXO40Q9UH90 709 aa17.61■□□□□ 0.41
CXCL12-207ENST00000488591 PLXNB2O15031 1838 aa17.61■□□□□ 0.41
CXCL12-207ENST00000488591 EPB41L2O43491 1005 aaKnown RBP17.6■□□□□ 0.41
CXCL12-207ENST00000488591 MYCP01106 439 aaPredicted RBP17.6■□□□□ 0.41
CXCL12-207ENST00000488591 HMGCRP04035 888 aa17.6■□□□□ 0.41
CXCL12-207ENST00000488591 ADORA2AP29274 412 aa17.6■□□□□ 0.41
CXCL12-207ENST00000488591 CCDC174Q6PII3 467 aa17.6■□□□□ 0.41
CXCL12-207ENST00000488591 TMTC2Q8N394 836 aa17.6■□□□□ 0.41
CXCL12-207ENST00000488591 TMEM87BQ96K49 555 aa17.6■□□□□ 0.41
CXCL12-207ENST00000488591 NEK1Q96PY6 1258 aa17.6■□□□□ 0.41
CXCL12-207ENST00000488591 PNMA2Q9UL42 364 aa17.6■□□□□ 0.41
CXCL12-207ENST00000488591 EIF5BO60841 1220 aaKnown RBP17.59■□□□□ 0.41
CXCL12-207ENST00000488591 INHAP05111 366 aa17.59■□□□□ 0.41
CXCL12-207ENST00000488591 HOXC6P09630 235 aa17.59■□□□□ 0.41
CXCL12-207ENST00000488591 GOLGA8HP0CJ92 632 aa17.59■□□□□ 0.41
CXCL12-207ENST00000488591 SOX10P56693 466 aa17.59■□□□□ 0.41
CXCL12-207ENST00000488591 ANTXR2P58335 489 aa17.59■□□□□ 0.41
CXCL12-207ENST00000488591 TKFCQ3LXA3 575 aa17.59■□□□□ 0.41
CXCL12-207ENST00000488591 CATIPQ7Z7H3 387 aa17.59■□□□□ 0.41
CXCL12-207ENST00000488591 CHST13Q8NET6 341 aa17.59■□□□□ 0.41
CXCL12-207ENST00000488591 IGDCC4Q8TDY8 1250 aa17.59■□□□□ 0.41
CXCL12-207ENST00000488591 RIPK3Q9Y572 518 aa17.59■□□□□ 0.41
CXCL12-207ENST00000488591 HMGB1P09429 215 aaKnown RBP17.58■□□□□ 0.4
CXCL12-207ENST00000488591 HSPA4P34932 840 aa17.58■□□□□ 0.4
CXCL12-207ENST00000488591 NFXL1Q6ZNB6 911 aa17.58■□□□□ 0.4
CXCL12-207ENST00000488591 TRIB2Q92519 343 aa17.58■□□□□ 0.4
CXCL12-207ENST00000488591 DDX11Q96FC9 970 aa17.58■□□□□ 0.4
CXCL12-207ENST00000488591 AGBL1Q96MI9 1066 aa17.58■□□□□ 0.4
CXCL12-207ENST00000488591 RNF208Q9H0X6 261 aa17.58■□□□□ 0.4
CXCL12-207ENST00000488591 RANBP17Q9H2T7 1088 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms