RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 GMPSP49915 693 aaPredicted RBP23.18■■□□□ 1.3
NECAB3-213ENST00000488489 ICA1Q05084 483 aa23.18■■□□□ 1.3
NECAB3-213ENST00000488489 PPP4R3BQ5MIZ7 849 aa23.18■■□□□ 1.3
NECAB3-213ENST00000488489 RBM26Q5T8P6 1007 aaKnown RBP23.18■■□□□ 1.3
NECAB3-213ENST00000488489 SHC4Q6S5L8 630 aa23.18■■□□□ 1.3
NECAB3-213ENST00000488489 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.18■■□□□ 1.3
NECAB3-213ENST00000488489 PIK3AP1Q6ZUJ8 805 aa23.17■■□□□ 1.3
NECAB3-213ENST00000488489 KCTD1Q719H9 257 aa23.17■■□□□ 1.3
NECAB3-213ENST00000488489 RASGRP4Q8TDF6 673 aa23.17■■□□□ 1.3
NECAB3-213ENST00000488489 MRVI1Q9Y6F6 885 aa23.17■■□□□ 1.3
NECAB3-213ENST00000488489 GJA3Q9Y6H8 435 aa23.17■■□□□ 1.3
NECAB3-213ENST00000488489 GRIN1Q05586 938 aa23.17■■□□□ 1.3
NECAB3-213ENST00000488489 TRIM75PA6NK02 468 aa23.16■■□□□ 1.3
NECAB3-213ENST00000488489 ZNF500O60304 480 aaPredicted RBP23.16■■□□□ 1.3
NECAB3-213ENST00000488489 ILDR2Q71H61 639 aa23.16■■□□□ 1.3
NECAB3-213ENST00000488489 SAMD7Q7Z3H4 446 aa23.16■■□□□ 1.3
NECAB3-213ENST00000488489 MICALL2Q8IY33 904 aa23.16■■□□□ 1.3
NECAB3-213ENST00000488489 SEC63Q9UGP8 760 aaKnown RBP23.16■■□□□ 1.3
NECAB3-213ENST00000488489 ZNF541Q9H0D2 1346 aa23.16■■□□□ 1.3
NECAB3-213ENST00000488489 KINO60870 393 aaKnown RBP23.15■■□□□ 1.3
NECAB3-213ENST00000488489 PFKFB1P16118 471 aa23.15■■□□□ 1.3
NECAB3-213ENST00000488489 SLC16A2P36021 539 aa23.15■■□□□ 1.3
NECAB3-213ENST00000488489 MIGA2Q7L4E1 593 aa23.15■■□□□ 1.3
NECAB3-213ENST00000488489 ADGRF4Q8IZF3 695 aa23.15■■□□□ 1.3
NECAB3-213ENST00000488489 KRI1Q8N9T8 703 aaKnown RBP23.15■■□□□ 1.3
NECAB3-213ENST00000488489 CCDC148Q8NFR7 591 aa23.15■■□□□ 1.3
NECAB3-213ENST00000488489 FHDC1Q9C0D6 1143 aaPredicted RBP23.15■■□□□ 1.3
NECAB3-213ENST00000488489 JMJD4Q9H9V9 463 aa23.15■■□□□ 1.3
NECAB3-213ENST00000488489 FBXO2Q9UK22 296 aaPredicted RBP23.15■■□□□ 1.3
NECAB3-213ENST00000488489 CUTAO60888 179 aa23.15■■□□□ 1.3
NECAB3-213ENST00000488489 CCDC96Q2M329 555 aa23.15■■□□□ 1.3
NECAB3-213ENST00000488489 GPATCH4Q5T3I0 446 aaKnown RBP23.15■■□□□ 1.3
NECAB3-213ENST00000488489 DAGLBQ8NCG7 672 aa23.15■■□□□ 1.3
NECAB3-213ENST00000488489 DPF2Q92785 391 aa23.15■■□□□ 1.3
NECAB3-213ENST00000488489 ZMYND12Q9H0C1 365 aa23.15■■□□□ 1.3
NECAB3-213ENST00000488489 RAD21O60216 631 aa23.14■■□□□ 1.3
NECAB3-213ENST00000488489 PTPREP23469 700 aa23.14■■□□□ 1.3
NECAB3-213ENST00000488489 NAPAP54920 295 aa23.14■■□□□ 1.3
NECAB3-213ENST00000488489 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.14■■□□□ 1.3
NECAB3-213ENST00000488489 CNOT7Q9UIV1 285 aaKnown RBP23.14■■□□□ 1.3
NECAB3-213ENST00000488489 PCDHA6Q9UN73 950 aa23.14■■□□□ 1.3
NECAB3-213ENST00000488489 PCDHA8Q9Y5H6 950 aa23.14■■□□□ 1.3
NECAB3-213ENST00000488489 A0A1W2PRG0 241 aa23.14■■□□□ 1.29
NECAB3-213ENST00000488489 MMP14P50281 582 aa23.14■■□□□ 1.29
NECAB3-213ENST00000488489 RESP18Q5W5W9 173 aa23.14■■□□□ 1.29
NECAB3-213ENST00000488489 SLFN13Q68D06 897 aa23.14■■□□□ 1.29
NECAB3-213ENST00000488489 HPSEQ9Y251 543 aa23.14■■□□□ 1.29
NECAB3-213ENST00000488489 ASTN2O75129 1339 aaPredicted RBP23.13■■□□□ 1.29
NECAB3-213ENST00000488489 F5H6K3 240 aa23.13■■□□□ 1.29
NECAB3-213ENST00000488489 TBC1D12O60347 775 aa23.13■■□□□ 1.29
NECAB3-213ENST00000488489 ZNF202O95125 648 aa23.13■■□□□ 1.29
NECAB3-213ENST00000488489 TERF1P54274 439 aa23.13■■□□□ 1.29
NECAB3-213ENST00000488489 KLRC3Q07444 240 aa23.13■■□□□ 1.29
NECAB3-213ENST00000488489 HSP90AA2PQ14568 343 aaPredicted RBP23.13■■□□□ 1.29
NECAB3-213ENST00000488489 ZNF174Q15697 407 aa23.13■■□□□ 1.29
NECAB3-213ENST00000488489 SPECC1Q5M775 1068 aa23.13■■□□□ 1.29
NECAB3-213ENST00000488489 TTC38Q5R3I4 469 aa23.13■■□□□ 1.29
NECAB3-213ENST00000488489 GALNT17Q6IS24 598 aa23.13■■□□□ 1.29
NECAB3-213ENST00000488489 CEP131Q9UPN4 1083 aa23.13■■□□□ 1.29
NECAB3-213ENST00000488489 FAM237AA0A1B0GTK4 181 aa23.12■■□□□ 1.29
NECAB3-213ENST00000488489 CCDC192P0DO97 292 aa23.12■■□□□ 1.29
NECAB3-213ENST00000488489 SLC1A4P43007 532 aa23.12■■□□□ 1.29
NECAB3-213ENST00000488489 RASA3Q14644 834 aa23.12■■□□□ 1.29
NECAB3-213ENST00000488489 TBC1D10BQ4KMP7 808 aaPredicted RBP23.12■■□□□ 1.29
NECAB3-213ENST00000488489 ARHGAP27Q6ZUM4 889 aa23.12■■□□□ 1.29
NECAB3-213ENST00000488489 FAM177A1Q8N128 213 aaPredicted RBP23.12■■□□□ 1.29
NECAB3-213ENST00000488489 ZKSCAN5Q9Y2L8 839 aa23.12■■□□□ 1.29
NECAB3-213ENST00000488489 SMCO2A6NFE2 343 aa23.12■■□□□ 1.29
NECAB3-213ENST00000488489 TYRO3Q06418 890 aa23.12■■□□□ 1.29
NECAB3-213ENST00000488489 COA7Q96BR5 231 aa23.12■■□□□ 1.29
NECAB3-213ENST00000488489 SRPRBQ9Y5M8 271 aaKnown RBP23.12■■□□□ 1.29
NECAB3-213ENST00000488489 USP17L10C9JJH3 530 aa23.11■■□□□ 1.29
NECAB3-213ENST00000488489 PPP1R11O60927 126 aaPredicted RBP23.11■■□□□ 1.29
NECAB3-213ENST00000488489 TRAPPC10P48553 1259 aa23.11■■□□□ 1.29
NECAB3-213ENST00000488489 GMCL1P1Q8NEA9 526 aa23.11■■□□□ 1.29
NECAB3-213ENST00000488489 DCAF4Q8WV16 495 aa23.11■■□□□ 1.29
NECAB3-213ENST00000488489 CCDC39Q9UFE4 941 aa23.11■■□□□ 1.29
NECAB3-213ENST00000488489 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.11■■□□□ 1.29
NECAB3-213ENST00000488489 MAP3K10Q02779 954 aa23.11■■□□□ 1.29
NECAB3-213ENST00000488489 CCDC12Q8WUD4 166 aaPredicted RBP23.11■■□□□ 1.29
NECAB3-213ENST00000488489 ERCC4Q92889 916 aaPredicted RBP23.11■■□□□ 1.29
NECAB3-213ENST00000488489 MTMR8Q96EF0 704 aa23.11■■□□□ 1.29
NECAB3-213ENST00000488489 TEPSINQ96N21 525 aa23.11■■□□□ 1.29
NECAB3-213ENST00000488489 NUP88Q99567 741 aaPredicted RBP23.11■■□□□ 1.29
NECAB3-213ENST00000488489 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.11■■□□□ 1.29
NECAB3-213ENST00000488489 MORC2Q9Y6X9 1032 aaPredicted RBP23.11■■□□□ 1.29
NECAB3-213ENST00000488489 PNMA6FA0A0J9YX94 578 aa23.1■■□□□ 1.29
NECAB3-213ENST00000488489 CTAGE5O15320 804 aa23.1■■□□□ 1.29
NECAB3-213ENST00000488489 NDUFB10O96000 172 aa23.1■■□□□ 1.29
NECAB3-213ENST00000488489 ECE1P42892 770 aa23.1■■□□□ 1.29
NECAB3-213ENST00000488489 ZBTB21Q9ULJ3 1066 aa23.1■■□□□ 1.29
NECAB3-213ENST00000488489 SYKP43405 635 aa23.09■■□□□ 1.29
NECAB3-213ENST00000488489 PTGDRQ13258 359 aa23.09■■□□□ 1.29
NECAB3-213ENST00000488489 ACER1Q8TDN7 264 aa23.09■■□□□ 1.29
NECAB3-213ENST00000488489 SDF4Q9BRK5 362 aa23.09■■□□□ 1.29
NECAB3-213ENST00000488489 CSRNP2Q9H175 543 aa23.09■■□□□ 1.29
NECAB3-213ENST00000488489 C6orf50Q9HD87 102 aa23.09■■□□□ 1.29
NECAB3-213ENST00000488489 CCDC194A0A1B0GVG4 234 aa23.08■■□□□ 1.29
NECAB3-213ENST00000488489 hCG_1984214I3L0E3 225 aa23.08■■□□□ 1.29
NECAB3-213ENST00000488489 GNA11P29992 359 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms