RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 BDH2Q9BUT1 245 aa6.14□□□□□ -1.43
HMGB1P36-201ENST00000487709 TMPRSS5Q9H3S3 457 aa6.14□□□□□ -1.43
HMGB1P36-201ENST00000487709 FAM221AA4D161 298 aa6.13□□□□□ -1.43
HMGB1P36-201ENST00000487709 SYPP08247 313 aa6.13□□□□□ -1.43
HMGB1P36-201ENST00000487709 RTP1P59025 263 aa6.13□□□□□ -1.43
HMGB1P36-201ENST00000487709 YBX1P67809 324 aaKnown RBP6.13□□□□□ -1.43
HMGB1P36-201ENST00000487709 KRTAP5-3Q6L8H2 238 aa6.13□□□□□ -1.43
HMGB1P36-201ENST00000487709 IGDCC3Q8IVU1 814 aa6.13□□□□□ -1.43
HMGB1P36-201ENST00000487709 DAGLBQ8NCG7 672 aa6.13□□□□□ -1.43
HMGB1P36-201ENST00000487709 ENOX1Q8TC92 643 aaKnown RBP6.13□□□□□ -1.43
HMGB1P36-201ENST00000487709 CRELD1Q96HD1 420 aa6.13□□□□□ -1.43
HMGB1P36-201ENST00000487709 LUC7LQ9NQ29 371 aaKnown RBP6.13□□□□□ -1.43
HMGB1P36-201ENST00000487709 POLR3KQ9Y2Y1 108 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P36-201ENST00000487709 ZC3H12DA2A288 527 aaKnown RBP6.12□□□□□ -1.43
HMGB1P36-201ENST00000487709 PF4P02776 101 aa6.12□□□□□ -1.43
HMGB1P36-201ENST00000487709 MPOP05164 745 aa6.12□□□□□ -1.43
HMGB1P36-201ENST00000487709 NCKAP1LP55160 1127 aa6.12□□□□□ -1.43
HMGB1P36-201ENST00000487709 ERVFRD-1P60508 538 aa6.12□□□□□ -1.43
HMGB1P36-201ENST00000487709 PLP2Q04941 152 aa6.12□□□□□ -1.43
HMGB1P36-201ENST00000487709 CAMK2GQ13555 558 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P36-201ENST00000487709 RAB3GAP1Q15042 981 aa6.12□□□□□ -1.43
HMGB1P36-201ENST00000487709 BBS9Q3SYG4 887 aa6.12□□□□□ -1.43
HMGB1P36-201ENST00000487709 CCDC84Q86UT8 332 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P36-201ENST00000487709 LDHDQ86WU2 507 aa6.12□□□□□ -1.43
HMGB1P36-201ENST00000487709 GATAD2BQ8WXI9 593 aa6.12□□□□□ -1.43
HMGB1P36-201ENST00000487709 VWCEQ96DN2 955 aa6.12□□□□□ -1.43
HMGB1P36-201ENST00000487709 KLHL14Q9P2G3 628 aa6.12□□□□□ -1.43
HMGB1P36-201ENST00000487709 TAF6LQ9Y6J9 622 aa6.12□□□□□ -1.43
HMGB1P36-201ENST00000487709 PRR36Q9H6K5 1346 aa6.11□□□□□ -1.43
HMGB1P36-201ENST00000487709 NUDT19A8MXV4 375 aa6.11□□□□□ -1.43
HMGB1P36-201ENST00000487709 ABLIM1O14639 778 aa6.11□□□□□ -1.43
HMGB1P36-201ENST00000487709 RNF4P78317 190 aa6.11□□□□□ -1.43
HMGB1P36-201ENST00000487709 SNW1Q13573 536 aaKnown RBP6.11□□□□□ -1.43
HMGB1P36-201ENST00000487709 TAF1CQ15572 869 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P36-201ENST00000487709 ZNF655Q8N720 491 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P36-201ENST00000487709 LINC01356Q8N9X3 169 aa6.11□□□□□ -1.43
HMGB1P36-201ENST00000487709 NOC4LQ9BVI4 516 aaKnown RBP6.11□□□□□ -1.43
HMGB1P36-201ENST00000487709 GPR55Q9Y2T6 319 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P36-201ENST00000487709 ARL4AP40617 200 aa6.1□□□□□ -1.43
HMGB1P36-201ENST00000487709 LMNB2Q03252 620 aa6.1□□□□□ -1.43
HMGB1P36-201ENST00000487709 SPATS1Q496A3 300 aa6.1□□□□□ -1.43
HMGB1P36-201ENST00000487709 HSF5Q4G112 596 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P36-201ENST00000487709 GALNT18Q6P9A2 607 aa6.1□□□□□ -1.43
HMGB1P36-201ENST00000487709 LINC00116Q8NCU8 138 aa6.1□□□□□ -1.43
HMGB1P36-201ENST00000487709 ZNF428Q96B54 188 aa6.1□□□□□ -1.43
HMGB1P36-201ENST00000487709 BUB1BO60566 1050 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P36-201ENST00000487709 PRAMEF1O95521 474 aa6.09□□□□□ -1.43
HMGB1P36-201ENST00000487709 FAM160A1Q05DH4 1040 aa6.09□□□□□ -1.43
HMGB1P36-201ENST00000487709 EFEMP1Q12805 493 aa6.09□□□□□ -1.43
HMGB1P36-201ENST00000487709 RTP5Q14D33 572 aa6.09□□□□□ -1.43
HMGB1P36-201ENST00000487709 ZXDCQ2QGD7 858 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P36-201ENST00000487709 ARSHQ5FYA8 562 aa6.09□□□□□ -1.43
HMGB1P36-201ENST00000487709 FRMD5Q7Z6J6 570 aa6.09□□□□□ -1.43
HMGB1P36-201ENST00000487709 TMEM87AQ8NBN3 555 aa6.09□□□□□ -1.43
HMGB1P36-201ENST00000487709 TP53I13Q8NBR0 393 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P36-201ENST00000487709 FCRL2Q96LA5 508 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P36-201ENST00000487709 FAM161BQ96MY7 647 aa6.09□□□□□ -1.43
HMGB1P36-201ENST00000487709 MINPP1Q9UNW1 487 aa6.09□□□□□ -1.43
HMGB1P36-201ENST00000487709 FADS2P1A8MWK0 482 aa6.08□□□□□ -1.44
HMGB1P36-201ENST00000487709 MEIS1O00470 390 aa6.08□□□□□ -1.44
HMGB1P36-201ENST00000487709 SCAMP3O14828 347 aaKnown RBP6.08□□□□□ -1.44
HMGB1P36-201ENST00000487709 RGS13O14921 159 aa6.08□□□□□ -1.44
HMGB1P36-201ENST00000487709 PRICKLE3O43900 615 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P36-201ENST00000487709 UBOX5O94941 541 aa6.08□□□□□ -1.44
HMGB1P36-201ENST00000487709 INSRRP14616 1297 aa6.08□□□□□ -1.44
HMGB1P36-201ENST00000487709 RAG1P15918 1043 aa6.08□□□□□ -1.44
HMGB1P36-201ENST00000487709 PRKCAP17252 672 aa6.08□□□□□ -1.44
HMGB1P36-201ENST00000487709 LIMS1P48059 325 aa6.08□□□□□ -1.44
HMGB1P36-201ENST00000487709 ST13P50502 369 aaKnown RBP6.08□□□□□ -1.44
HMGB1P36-201ENST00000487709 TAGLNQ01995 201 aaKnown RBP6.08□□□□□ -1.44
HMGB1P36-201ENST00000487709 NBPF9Q3BBW0 867 aa6.08□□□□□ -1.44
HMGB1P36-201ENST00000487709 NUP43Q8NFH3 380 aa6.08□□□□□ -1.44
HMGB1P36-201ENST00000487709 FBXO27Q8NI29 283 aa6.08□□□□□ -1.44
HMGB1P36-201ENST00000487709 TNFRSF10DQ9UBN6 386 aa6.08□□□□□ -1.44
HMGB1P36-201ENST00000487709 PCDHA5Q9Y5H7 936 aa6.08□□□□□ -1.44
HMGB1P36-201ENST00000487709 WTIPA6NIX2 430 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P36-201ENST00000487709 TCF3P15923 654 aa6.07□□□□□ -1.44
HMGB1P36-201ENST00000487709 GBP2P32456 591 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P36-201ENST00000487709 CYP4F8P98187 520 aa6.07□□□□□ -1.44
HMGB1P36-201ENST00000487709 TMEM62Q0P6H9 643 aa6.07□□□□□ -1.44
HMGB1P36-201ENST00000487709 MRPL58Q14197 206 aaKnown RBP6.07□□□□□ -1.44
HMGB1P36-201ENST00000487709 PUM1Q14671 1186 aaKnown RBP eCLIP6.07□□□□□ -1.44
HMGB1P36-201ENST00000487709 SNAP47Q5SQN1 464 aa6.07□□□□□ -1.44
HMGB1P36-201ENST00000487709 RHOVQ96L33 236 aa6.07□□□□□ -1.44
HMGB1P36-201ENST00000487709 CDADC1Q9BWV3 514 aa6.07□□□□□ -1.44
HMGB1P36-201ENST00000487709 METTL5Q9NRN9 209 aaKnown RBP6.07□□□□□ -1.44
HMGB1P36-201ENST00000487709 UNCXA6NJT0 531 aa6.06□□□□□ -1.44
HMGB1P36-201ENST00000487709 FFAR3O14843 346 aa6.06□□□□□ -1.44
HMGB1P36-201ENST00000487709 POLR2BP30876 1174 aaKnown RBP6.06□□□□□ -1.44
HMGB1P36-201ENST00000487709 KCNC1P48547 511 aa6.06□□□□□ -1.44
HMGB1P36-201ENST00000487709 LAPTM5Q13571 262 aa6.06□□□□□ -1.44
HMGB1P36-201ENST00000487709 NBPF12Q5TAG4 269 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P36-201ENST00000487709 RPTNQ6XPR3 784 aa6.06□□□□□ -1.44
HMGB1P36-201ENST00000487709 REC114Q7Z4M0 266 aa6.06□□□□□ -1.44
HMGB1P36-201ENST00000487709 GOLM1Q8NBJ4 401 aa6.06□□□□□ -1.44
HMGB1P36-201ENST00000487709 ZNF512BQ96KM6 892 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P36-201ENST00000487709 PRDM14Q9GZV8 571 aa6.06□□□□□ -1.44
HMGB1P36-201ENST00000487709 TNFRSF12AQ9NP84 129 aa6.06□□□□□ -1.44
HMGB1P36-201ENST00000487709 ERVK13-1Q9NX77 482 aa6.06□□□□□ -1.44
HMGB1P36-201ENST00000487709 MINDY4BA8MYZ0 360 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms