RNA–Protein interactions for RNA: ENST00000487656.1

MACF1-221, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-221ENST00000487656 LRIT3Q3SXY7 679 aa6.8□□□□□ -1.32
MACF1-221ENST00000487656 LINC01559Q495D7 138 aa6.8□□□□□ -1.32
MACF1-221ENST00000487656 DDX60LQ5H9U9 1706 aaKnown RBP6.8□□□□□ -1.32
MACF1-221ENST00000487656 PI16Q6UXB8 463 aa6.8□□□□□ -1.32
MACF1-221ENST00000487656 PLEKHH3Q7Z736 793 aa6.8□□□□□ -1.32
MACF1-221ENST00000487656 BPHLQ86WA6 291 aaPredicted RBP6.8□□□□□ -1.32
MACF1-221ENST00000487656 TDHQ8IZJ6 230 aa6.8□□□□□ -1.32
MACF1-221ENST00000487656 DEFB123Q8N688 67 aa6.8□□□□□ -1.32
MACF1-221ENST00000487656 ADAM32Q8TC27 787 aa6.8□□□□□ -1.32
MACF1-221ENST00000487656 CDK5RAP2Q96SN8 1893 aa6.8□□□□□ -1.32
MACF1-221ENST00000487656 PPP1R12CQ9BZL4 782 aa6.8□□□□□ -1.32
MACF1-221ENST00000487656 UBE2OQ9C0C9 1292 aaKnown RBP6.8□□□□□ -1.32
MACF1-221ENST00000487656 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.8□□□□□ -1.32
MACF1-221ENST00000487656 AATFQ9NY61 560 aaKnown RBP eCLIP6.8□□□□□ -1.32
MACF1-221ENST00000487656 PALD1Q9ULE6 856 aa6.8□□□□□ -1.32
MACF1-221ENST00000487656 PCDHB9Q9Y5E1 797 aa6.8□□□□□ -1.32
MACF1-221ENST00000487656 MYH1P12882 1939 aa6.8□□□□□ -1.32
MACF1-221ENST00000487656 MYO5AQ9Y4I1 1855 aaKnown RBP6.79□□□□□ -1.32
MACF1-221ENST00000487656 MAGEB6P1A0A0J9YX57 407 aa6.79□□□□□ -1.32
MACF1-221ENST00000487656 SYN1P17600 705 aa6.79□□□□□ -1.32
MACF1-221ENST00000487656 MAGEA10P43363 369 aaPredicted RBP6.79□□□□□ -1.32
MACF1-221ENST00000487656 ERVK-9P63128 1117 aa6.79□□□□□ -1.32
MACF1-221ENST00000487656 ERVK-24P63145 666 aa6.79□□□□□ -1.32
MACF1-221ENST00000487656 CACNB2Q08289 660 aaPredicted RBP6.79□□□□□ -1.32
MACF1-221ENST00000487656 OS9Q13438 667 aaPredicted RBP6.79□□□□□ -1.32
MACF1-221ENST00000487656 MAP3K21Q5TCX8 1036 aa6.79□□□□□ -1.32
MACF1-221ENST00000487656 MFSD14CQ5VZR4 134 aa6.79□□□□□ -1.32
MACF1-221ENST00000487656 PPP1R18Q6NYC8 613 aa6.79□□□□□ -1.32
MACF1-221ENST00000487656 USP17L2Q6R6M4 530 aa6.79□□□□□ -1.32
MACF1-221ENST00000487656 METTL16Q86W50 562 aaKnown RBP6.79□□□□□ -1.32
MACF1-221ENST00000487656 CERS3Q8IU89 383 aa6.79□□□□□ -1.32
MACF1-221ENST00000487656 MAPKAPK5Q8IW41 473 aa6.79□□□□□ -1.32
MACF1-221ENST00000487656 ZNF511Q8NB15 262 aa6.79□□□□□ -1.32
MACF1-221ENST00000487656 TRIB2Q92519 343 aa6.79□□□□□ -1.32
MACF1-221ENST00000487656 FRAT1Q92837 279 aaPredicted RBP6.79□□□□□ -1.32
MACF1-221ENST00000487656 EDC3Q96F86 508 aaKnown RBP6.79□□□□□ -1.32
MACF1-221ENST00000487656 PAGR1Q9BTK6 254 aa6.79□□□□□ -1.32
MACF1-221ENST00000487656 GPR108Q9NPR9 543 aa6.79□□□□□ -1.32
MACF1-221ENST00000487656 TFIP11Q9UBB9 837 aaKnown RBP6.79□□□□□ -1.32
MACF1-221ENST00000487656 RBPJLQ9UBG7 517 aa6.79□□□□□ -1.32
MACF1-221ENST00000487656 RABGAP1Q9Y3P9 1069 aa6.79□□□□□ -1.32
MACF1-221ENST00000487656 FOCADQ5VW36 1801 aa6.78□□□□□ -1.32
MACF1-221ENST00000487656 PNMA6EA0A0J9YXQ4 647 aa6.78□□□□□ -1.32
MACF1-221ENST00000487656 PALM3A6NDB9 673 aaPredicted RBP6.78□□□□□ -1.32
MACF1-221ENST00000487656 USP17L15C9J2P7 530 aa6.78□□□□□ -1.32
MACF1-221ENST00000487656 USP17L13C9JLJ4 530 aa6.78□□□□□ -1.32
MACF1-221ENST00000487656 USP17L11C9JVI0 530 aa6.78□□□□□ -1.32
MACF1-221ENST00000487656 USP17L18D6R9N7 530 aa6.78□□□□□ -1.32
MACF1-221ENST00000487656 USP17L22D6RA61 530 aa6.78□□□□□ -1.32
MACF1-221ENST00000487656 USP17L17D6RBQ6 530 aa6.78□□□□□ -1.32
MACF1-221ENST00000487656 USP17L19D6RCP7 530 aa6.78□□□□□ -1.32
MACF1-221ENST00000487656 USP17L20D6RJB6 530 aa6.78□□□□□ -1.32
MACF1-221ENST00000487656 MSCO60682 206 aa6.78□□□□□ -1.32
MACF1-221ENST00000487656 RFX1P22670 979 aa6.78□□□□□ -1.32
MACF1-221ENST00000487656 CYP7A1P22680 504 aa6.78□□□□□ -1.32
MACF1-221ENST00000487656 USP14P54578 494 aa6.78□□□□□ -1.32
MACF1-221ENST00000487656 USP17L24Q0WX57 530 aa6.78□□□□□ -1.32
MACF1-221ENST00000487656 GPR142Q7Z601 462 aa6.78□□□□□ -1.32
MACF1-221ENST00000487656 TTC6Q86TZ1 520 aa6.78□□□□□ -1.32
MACF1-221ENST00000487656 USP6NLQ92738 828 aa6.78□□□□□ -1.32
MACF1-221ENST00000487656 ZNF512BQ96KM6 892 aaPredicted RBP6.78□□□□□ -1.32
MACF1-221ENST00000487656 FEZ1Q99689 392 aa6.78□□□□□ -1.32
MACF1-221ENST00000487656 APBA2Q99767 749 aa6.78□□□□□ -1.32
MACF1-221ENST00000487656 LBHD1Q9BQE6 289 aaPredicted RBP6.78□□□□□ -1.32
MACF1-221ENST00000487656 OCSTAMPQ9BR26 566 aa6.78□□□□□ -1.32
MACF1-221ENST00000487656 TXNRD2Q9NNW7 524 aa6.78□□□□□ -1.32
MACF1-221ENST00000487656 CABP5Q9NP86 173 aa6.78□□□□□ -1.32
MACF1-221ENST00000487656 SAP30BPQ9UHR5 308 aaKnown RBP6.78□□□□□ -1.32
MACF1-221ENST00000487656 ZBTB21Q9ULJ3 1066 aa6.78□□□□□ -1.32
MACF1-221ENST00000487656 STXBP5LQ9Y2K9 1186 aa6.78□□□□□ -1.32
MACF1-221ENST00000487656 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.78□□□□□ -1.32
MACF1-221ENST00000487656 IVNS1ABPQ9Y6Y0 642 aa6.78□□□□□ -1.32
MACF1-221ENST00000487656 SZT2Q5T011 3432 aa6.78□□□□□ -1.32
MACF1-221ENST00000487656 FLT1P17948 1338 aa6.77□□□□□ -1.32
MACF1-221ENST00000487656 RANBP2P49792 3224 aaKnown RBP6.77□□□□□ -1.33
MACF1-221ENST00000487656 SLC15A5A6NIM6 579 aa6.77□□□□□ -1.33
MACF1-221ENST00000487656 SURF6O75683 361 aaKnown RBP6.77□□□□□ -1.33
MACF1-221ENST00000487656 GDF11O95390 407 aa6.77□□□□□ -1.33
MACF1-221ENST00000487656 GH2P01242 217 aa6.77□□□□□ -1.33
MACF1-221ENST00000487656 CYP2E1P05181 493 aaPredicted RBP6.77□□□□□ -1.33
MACF1-221ENST00000487656 COL6A1P12109 1028 aa6.77□□□□□ -1.33
MACF1-221ENST00000487656 TRIM27P14373 513 aa6.77□□□□□ -1.33
MACF1-221ENST00000487656 CNGA1P29973 690 aa6.77□□□□□ -1.33
MACF1-221ENST00000487656 CCND3P30281 292 aaPredicted RBP6.77□□□□□ -1.33
MACF1-221ENST00000487656 USP5P45974 858 aa6.77□□□□□ -1.33
MACF1-221ENST00000487656 SH3BP2P78314 561 aa6.77□□□□□ -1.33
MACF1-221ENST00000487656 JAG1P78504 1218 aa6.77□□□□□ -1.33
MACF1-221ENST00000487656 ATP8B2P98198 1209 aa6.77□□□□□ -1.33
MACF1-221ENST00000487656 ATP2B2Q01814 1243 aa6.77□□□□□ -1.33
MACF1-221ENST00000487656 CCL14Q16627 93 aa6.77□□□□□ -1.33
MACF1-221ENST00000487656 SLFNL1Q499Z3 407 aa6.77□□□□□ -1.33
MACF1-221ENST00000487656 TNNI3KQ59H18 835 aa6.77□□□□□ -1.33
MACF1-221ENST00000487656 WDR78Q5VTH9 848 aa6.77□□□□□ -1.33
MACF1-221ENST00000487656 TMED8Q6PL24 325 aaPredicted RBP6.77□□□□□ -1.33
MACF1-221ENST00000487656 CATSPERGQ6ZRH7 1159 aa6.77□□□□□ -1.33
MACF1-221ENST00000487656 SH3RF1Q7Z6J0 888 aa6.77□□□□□ -1.33
MACF1-221ENST00000487656 FOXJ1Q92949 421 aa6.77□□□□□ -1.33
MACF1-221ENST00000487656 UCN2Q96RP3 112 aa6.77□□□□□ -1.33
MACF1-221ENST00000487656 SENP6Q9GZR1 1112 aaPredicted RBP6.77□□□□□ -1.33
MACF1-221ENST00000487656 PORCNQ9H237 461 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms