RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 GTF3C2Q8WUA4 911 aaPredicted RBP14.88□□□□□ -0.03
PRDM2-208ENST00000487453 CHURC1Q8WUH1 139 aa14.88□□□□□ -0.03
PRDM2-208ENST00000487453 CFHR5Q9BXR6 569 aa14.88□□□□□ -0.03
PRDM2-208ENST00000487453 R3HDMLQ9H3Y0 253 aa14.88□□□□□ -0.03
PRDM2-208ENST00000487453 HOXC10Q9NYD6 342 aa14.88□□□□□ -0.03
PRDM2-208ENST00000487453 GOLGA8AA7E2F4 631 aa14.87□□□□□ -0.03
PRDM2-208ENST00000487453 FOXN1O15353 648 aa14.87□□□□□ -0.03
PRDM2-208ENST00000487453 ECM2O94769 699 aaPredicted RBP14.87□□□□□ -0.03
PRDM2-208ENST00000487453 AK2P54819 239 aa14.87□□□□□ -0.03
PRDM2-208ENST00000487453 PLS1Q14651 629 aa14.87□□□□□ -0.03
PRDM2-208ENST00000487453 SYDE2Q5VT97 1194 aa14.87□□□□□ -0.03
PRDM2-208ENST00000487453 STAG2Q8N3U4 1231 aa14.87□□□□□ -0.03
PRDM2-208ENST00000487453 KIF2CQ99661 725 aa14.87□□□□□ -0.03
PRDM2-208ENST00000487453 LARP6Q9BRS8 491 aaKnown RBP14.87□□□□□ -0.03
PRDM2-208ENST00000487453 AGXT2Q9BYV1 514 aa14.87□□□□□ -0.03
PRDM2-208ENST00000487453 UBA5Q9GZZ9 404 aa14.87□□□□□ -0.03
PRDM2-208ENST00000487453 CPVLQ9H3G5 476 aa14.87□□□□□ -0.03
PRDM2-208ENST00000487453 MAD2L2Q9UI95 211 aa14.87□□□□□ -0.03
PRDM2-208ENST00000487453 PRR12Q9ULL5 1215 aa14.87□□□□□ -0.03
PRDM2-208ENST00000487453 ZSWIM8A7E2V4 1837 aa14.87□□□□□ -0.03
PRDM2-208ENST00000487453 KLRF2D3W0D1 207 aa14.86□□□□□ -0.03
PRDM2-208ENST00000487453 GPR25O00155 361 aa14.86□□□□□ -0.03
PRDM2-208ENST00000487453 VWA5AO00534 786 aa14.86□□□□□ -0.03
PRDM2-208ENST00000487453 PEX10O60683 326 aa14.86□□□□□ -0.03
PRDM2-208ENST00000487453 ZBED4O75132 1171 aa14.86□□□□□ -0.03
PRDM2-208ENST00000487453 METAP2P50579 478 aaKnown RBP eCLIP14.86□□□□□ -0.03
PRDM2-208ENST00000487453 RABEP1Q15276 862 aa14.86□□□□□ -0.03
PRDM2-208ENST00000487453 ANKRD1Q15327 319 aa14.86□□□□□ -0.03
PRDM2-208ENST00000487453 FAM110CQ1W6H9 321 aa14.86□□□□□ -0.03
PRDM2-208ENST00000487453 C17orf99Q6UX52 265 aa14.86□□□□□ -0.03
PRDM2-208ENST00000487453 LBX2Q6XYB7 198 aa14.86□□□□□ -0.03
PRDM2-208ENST00000487453 FBXL16Q8N461 479 aa14.86□□□□□ -0.03
PRDM2-208ENST00000487453 MB21D1Q8N884 522 aa14.86□□□□□ -0.03
PRDM2-208ENST00000487453 PALM3A6NDB9 673 aaPredicted RBP14.85□□□□□ -0.03
PRDM2-208ENST00000487453 PLA2G6O60733 806 aa14.85□□□□□ -0.03
PRDM2-208ENST00000487453 HSPA8P11142 646 aaKnown RBP14.85□□□□□ -0.03
PRDM2-208ENST00000487453 BCRP11274 1271 aa14.85□□□□□ -0.03
PRDM2-208ENST00000487453 SLC4A3P48751 1232 aa14.85□□□□□ -0.03
PRDM2-208ENST00000487453 SNAP25P60880 206 aa14.85□□□□□ -0.03
PRDM2-208ENST00000487453 ERVK-9P63128 1117 aa14.85□□□□□ -0.03
PRDM2-208ENST00000487453 ERVK-24P63145 666 aa14.85□□□□□ -0.03
PRDM2-208ENST00000487453 STK3Q13188 491 aa14.85□□□□□ -0.03
PRDM2-208ENST00000487453 RTN1Q16799 776 aa14.85□□□□□ -0.03
PRDM2-208ENST00000487453 CCDC174Q6PII3 467 aa14.85□□□□□ -0.03
PRDM2-208ENST00000487453 CCAR1Q8IX12 1150 aaKnown RBP14.85□□□□□ -0.03
PRDM2-208ENST00000487453 CPXCR1Q8N123 301 aa14.85□□□□□ -0.03
PRDM2-208ENST00000487453 GPRC5AQ8NFJ5 357 aa14.85□□□□□ -0.03
PRDM2-208ENST00000487453 MAP3K14Q99558 947 aa14.85□□□□□ -0.03
PRDM2-208ENST00000487453 TXNRD2Q9NNW7 524 aa14.85□□□□□ -0.03
PRDM2-208ENST00000487453 BTBD7Q9P203 1132 aa14.85□□□□□ -0.03
PRDM2-208ENST00000487453 RBPJLQ9UBG7 517 aa14.85□□□□□ -0.03
PRDM2-208ENST00000487453 MORF4L1Q9UBU8 362 aa14.85□□□□□ -0.03
PRDM2-208ENST00000487453 RABGAP1Q9Y3P9 1069 aa14.85□□□□□ -0.03
PRDM2-208ENST00000487453 ST18O60284 1047 aa14.84□□□□□ -0.03
PRDM2-208ENST00000487453 CNMDO75829 334 aa14.84□□□□□ -0.03
PRDM2-208ENST00000487453 PLEKHA8P1O95397 391 aa14.84□□□□□ -0.03
PRDM2-208ENST00000487453 CTCFP49711 727 aaPredicted RBP14.84□□□□□ -0.03
PRDM2-208ENST00000487453 SP3Q02447 781 aa14.84□□□□□ -0.03
PRDM2-208ENST00000487453 TMEM132BQ14DG7 1078 aa14.84□□□□□ -0.03
PRDM2-208ENST00000487453 WDR78Q5VTH9 848 aa14.84□□□□□ -0.03
PRDM2-208ENST00000487453 POTEEQ6S8J3 1075 aa14.84□□□□□ -0.03
PRDM2-208ENST00000487453 BTNL9Q6UXG8 535 aa14.84□□□□□ -0.03
PRDM2-208ENST00000487453 ADGRF4Q8IZF3 695 aa14.84□□□□□ -0.03
PRDM2-208ENST00000487453 FANCBQ8NB91 859 aa14.84□□□□□ -0.03
PRDM2-208ENST00000487453 ZNF296Q8WUU4 475 aaPredicted RBP14.84□□□□□ -0.03
PRDM2-208ENST00000487453 CWC22Q9HCG8 908 aaKnown RBP14.84□□□□□ -0.03
PRDM2-208ENST00000487453 VAT1LQ9HCJ6 419 aa14.84□□□□□ -0.03
PRDM2-208ENST00000487453 RBM28Q9NW13 759 aaKnown RBP14.84□□□□□ -0.03
PRDM2-208ENST00000487453 MGAMO43451 1857 aa14.84□□□□□ -0.03
PRDM2-208ENST00000487453 RBBP6Q7Z6E9 1792 aaKnown RBP14.83□□□□□ -0.03
PRDM2-208ENST00000487453 PLXNB2O15031 1838 aa14.83□□□□□ -0.04
PRDM2-208ENST00000487453 FKTNO75072 461 aa14.83□□□□□ -0.04
PRDM2-208ENST00000487453 FDX1P10109 184 aa14.83□□□□□ -0.04
PRDM2-208ENST00000487453 PDIA3P30101 505 aaKnown RBP14.83□□□□□ -0.04
PRDM2-208ENST00000487453 GNAQP50148 359 aa14.83□□□□□ -0.04
PRDM2-208ENST00000487453 LBX1P52954 281 aa14.83□□□□□ -0.04
PRDM2-208ENST00000487453 RCAN1P53805 252 aa14.83□□□□□ -0.04
PRDM2-208ENST00000487453 CCNA1P78396 465 aa14.83□□□□□ -0.04
PRDM2-208ENST00000487453 KIF22Q14807 665 aa14.83□□□□□ -0.04
PRDM2-208ENST00000487453 CDC37Q16543 378 aaPredicted RBP14.83□□□□□ -0.04
PRDM2-208ENST00000487453 SNRNP48Q6IEG0 339 aaKnown RBP14.83□□□□□ -0.04
PRDM2-208ENST00000487453 HOMER1Q86YM7 354 aa14.83□□□□□ -0.04
PRDM2-208ENST00000487453 CMTR1Q8N1G2 835 aaKnown RBP14.83□□□□□ -0.04
PRDM2-208ENST00000487453 CCDC82Q8N4S0 544 aa14.83□□□□□ -0.04
PRDM2-208ENST00000487453 PIBF1Q8WXW3 757 aa14.83□□□□□ -0.04
PRDM2-208ENST00000487453 SPATC1LQ9H0A9 340 aa14.83□□□□□ -0.04
PRDM2-208ENST00000487453 ALDH8A1Q9H2A2 487 aaPredicted RBP14.83□□□□□ -0.04
PRDM2-208ENST00000487453 RANBP17Q9H2T7 1088 aaKnown RBP14.83□□□□□ -0.04
PRDM2-208ENST00000487453 SLC38A10Q9HBR0 1119 aa14.83□□□□□ -0.04
PRDM2-208ENST00000487453 RAVER2Q9HCJ3 691 aaKnown RBP14.83□□□□□ -0.04
PRDM2-208ENST00000487453 ZNF214Q9UL59 606 aaPredicted RBP14.83□□□□□ -0.04
PRDM2-208ENST00000487453 ADAMTS5Q9UNA0 930 aa14.83□□□□□ -0.04
PRDM2-208ENST00000487453 NID2Q14112 1375 aa14.83□□□□□ -0.04
PRDM2-208ENST00000487453 PCNTO95613 3336 aa14.82□□□□□ -0.04
PRDM2-208ENST00000487453 MYH6P13533 1939 aa14.82□□□□□ -0.04
PRDM2-208ENST00000487453 CCDC196A0A1B0GTZ2 297 aa14.82□□□□□ -0.04
PRDM2-208ENST00000487453 CCT2P78371 535 aaKnown RBP14.82□□□□□ -0.04
PRDM2-208ENST00000487453 LACTBP83111 547 aaPredicted RBP14.82□□□□□ -0.04
PRDM2-208ENST00000487453 TMTC3Q6ZXV5 915 aa14.82□□□□□ -0.04
PRDM2-208ENST00000487453 NBPF11Q86T75 865 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms