RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 POLR3EQ9NVU0 708 aa16.21■□□□□ 0.19
EPHB4-206ENST00000487222 ODF2LQ9ULJ1 636 aa16.21■□□□□ 0.19
EPHB4-206ENST00000487222 IGSF1Q8N6C5 1336 aa16.21■□□□□ 0.19
EPHB4-206ENST00000487222 PCP11498 1178 aaKnown RBP16.21■□□□□ 0.19
EPHB4-206ENST00000487222 LRRC24Q50LG9 513 aa16.21■□□□□ 0.19
EPHB4-206ENST00000487222 ZMYM1Q5SVZ6 1142 aa16.21■□□□□ 0.19
EPHB4-206ENST00000487222 CDAN1Q8IWY9 1227 aa16.21■□□□□ 0.19
EPHB4-206ENST00000487222 ARHGEF2Q92974 986 aaKnown RBP16.21■□□□□ 0.19
EPHB4-206ENST00000487222 IKBKBO14920 756 aa16.21■□□□□ 0.19
EPHB4-206ENST00000487222 TECP42680 631 aa16.21■□□□□ 0.19
EPHB4-206ENST00000487222 DBNLQ9UJU6 430 aaKnown RBP16.21■□□□□ 0.19
EPHB4-206ENST00000487222 H0YIN7 160 aa16.21■□□□□ 0.19
EPHB4-206ENST00000487222 KRIT1O00522 736 aa16.21■□□□□ 0.19
EPHB4-206ENST00000487222 GMNNO75496 209 aa16.21■□□□□ 0.19
EPHB4-206ENST00000487222 CLNS1AP54105 237 aaKnown RBP16.21■□□□□ 0.19
EPHB4-206ENST00000487222 ZYXQ15942 572 aaKnown RBP16.21■□□□□ 0.19
EPHB4-206ENST00000487222 PICK1Q9NRD5 415 aa16.21■□□□□ 0.19
EPHB4-206ENST00000487222 PCDHA12Q9UN75 941 aa16.21■□□□□ 0.19
EPHB4-206ENST00000487222 HGSO14964 777 aaPredicted RBP16.2■□□□□ 0.18
EPHB4-206ENST00000487222 PPANQ9NQ55 473 aaKnown RBP16.2■□□□□ 0.18
EPHB4-206ENST00000487222 HOMER3Q9NSC5 361 aa16.2■□□□□ 0.18
EPHB4-206ENST00000487222 CDC23Q9UJX2 597 aa16.2■□□□□ 0.18
EPHB4-206ENST00000487222 CYP21A2P08686 494 aa16.2■□□□□ 0.18
EPHB4-206ENST00000487222 PTGDRQ13258 359 aa16.2■□□□□ 0.18
EPHB4-206ENST00000487222 SDCCAG8Q86SQ7 713 aaPredicted RBP16.2■□□□□ 0.18
EPHB4-206ENST00000487222 FAM71BQ8TC56 605 aa16.2■□□□□ 0.18
EPHB4-206ENST00000487222 VCX3BQ9H321 246 aa16.2■□□□□ 0.18
EPHB4-206ENST00000487222 CD19P15391 556 aa16.2■□□□□ 0.18
EPHB4-206ENST00000487222 SPATS2Q86XZ4 545 aaKnown RBP16.2■□□□□ 0.18
EPHB4-206ENST00000487222 TPH2Q8IWU9 490 aa16.2■□□□□ 0.18
EPHB4-206ENST00000487222 GABPB2Q8TAK5 448 aaPredicted RBP16.2■□□□□ 0.18
EPHB4-206ENST00000487222 SYMPKQ92797 1274 aaKnown RBP16.2■□□□□ 0.18
EPHB4-206ENST00000487222 UIMC1Q96RL1 719 aa16.2■□□□□ 0.18
EPHB4-206ENST00000487222 TMOD4Q9NZQ9 345 aa16.2■□□□□ 0.18
EPHB4-206ENST00000487222 COPB1P53618 953 aaKnown RBP16.2■□□□□ 0.18
EPHB4-206ENST00000487222 ARHGEF25Q86VW2 580 aa16.2■□□□□ 0.18
EPHB4-206ENST00000487222 NSUN7Q8NE18 718 aaKnown RBP16.2■□□□□ 0.18
EPHB4-206ENST00000487222 SDR42E1Q8WUS8 393 aa16.2■□□□□ 0.18
EPHB4-206ENST00000487222 PPP1R13BQ96KQ4 1090 aa16.2■□□□□ 0.18
EPHB4-206ENST00000487222 MAGEF1Q9HAY2 307 aa16.2■□□□□ 0.18
EPHB4-206ENST00000487222 I3L4J1 428 aa16.19■□□□□ 0.18
EPHB4-206ENST00000487222 ATP8B1O43520 1251 aa16.19■□□□□ 0.18
EPHB4-206ENST00000487222 GAS7O60861 476 aa16.19■□□□□ 0.18
EPHB4-206ENST00000487222 P3H4Q92791 437 aa16.19■□□□□ 0.18
EPHB4-206ENST00000487222 NRBP1Q9UHY1 535 aa16.19■□□□□ 0.18
EPHB4-206ENST00000487222 KLRF2D3W0D1 207 aa16.19■□□□□ 0.18
EPHB4-206ENST00000487222 ANKRD20A3Q5VUR7 823 aa16.19■□□□□ 0.18
EPHB4-206ENST00000487222 FOXP1Q9H334 677 aaPredicted RBP16.19■□□□□ 0.18
EPHB4-206ENST00000487222 METTL14Q9HCE5 456 aaKnown RBP16.19■□□□□ 0.18
EPHB4-206ENST00000487222 ZBED4O75132 1171 aa16.19■□□□□ 0.18
EPHB4-206ENST00000487222 STX2P32856 288 aa16.19■□□□□ 0.18
EPHB4-206ENST00000487222 SRGAP1Q7Z6B7 1085 aa16.19■□□□□ 0.18
EPHB4-206ENST00000487222 CPXCR1Q8N123 301 aa16.19■□□□□ 0.18
EPHB4-206ENST00000487222 SAMD9LQ8IVG5 1584 aa16.19■□□□□ 0.18
EPHB4-206ENST00000487222 SYNMO15061 1565 aa16.19■□□□□ 0.18
EPHB4-206ENST00000487222 ABCB4P21439 1286 aa16.19■□□□□ 0.18
EPHB4-206ENST00000487222 APBA1Q02410 837 aa16.19■□□□□ 0.18
EPHB4-206ENST00000487222 NSMFQ6X4W1 530 aa16.19■□□□□ 0.18
EPHB4-206ENST00000487222 LARGE2Q8N3Y3 721 aa16.19■□□□□ 0.18
EPHB4-206ENST00000487222 SUPT20HQ8NEM7 779 aa16.19■□□□□ 0.18
EPHB4-206ENST00000487222 GOLGA5Q8TBA6 731 aa16.19■□□□□ 0.18
EPHB4-206ENST00000487222 PPP1R12CQ9BZL4 782 aa16.19■□□□□ 0.18
EPHB4-206ENST00000487222 PLEKHA4Q9H4M7 779 aa16.19■□□□□ 0.18
EPHB4-206ENST00000487222 USP21Q9UK80 565 aa16.19■□□□□ 0.18
EPHB4-206ENST00000487222 RCOR1Q9UKL0 485 aa16.19■□□□□ 0.18
EPHB4-206ENST00000487222 CIAO1O76071 339 aa16.18■□□□□ 0.18
EPHB4-206ENST00000487222 H2AFZP0C0S5 128 aa16.18■□□□□ 0.18
EPHB4-206ENST00000487222 RASSF2P50749 326 aa16.18■□□□□ 0.18
EPHB4-206ENST00000487222 H2AFVQ71UI9 128 aa16.18■□□□□ 0.18
EPHB4-206ENST00000487222 RDH13Q8NBN7 331 aa16.18■□□□□ 0.18
EPHB4-206ENST00000487222 PSTPIP2Q9H939 334 aa16.18■□□□□ 0.18
EPHB4-206ENST00000487222 CARMIL3Q8ND23 1372 aa16.18■□□□□ 0.18
EPHB4-206ENST00000487222 MLH3Q9UHC1 1453 aa16.18■□□□□ 0.18
EPHB4-206ENST00000487222 CLASP1Q7Z460 1538 aa16.18■□□□□ 0.18
EPHB4-206ENST00000487222 DAPK3O43293 454 aa16.18■□□□□ 0.18
EPHB4-206ENST00000487222 GEN1Q17RS7 908 aa16.18■□□□□ 0.18
EPHB4-206ENST00000487222 CAPS2Q9BXY5 557 aa16.18■□□□□ 0.18
EPHB4-206ENST00000487222 TRAPPC10P48553 1259 aa16.18■□□□□ 0.18
EPHB4-206ENST00000487222 PPARDQ03181 441 aa16.18■□□□□ 0.18
EPHB4-206ENST00000487222 VPS37BQ9H9H4 285 aa16.18■□□□□ 0.18
EPHB4-206ENST00000487222 NOP56O00567 594 aaKnown RBP16.18■□□□□ 0.18
EPHB4-206ENST00000487222 BCAMP50895 628 aa16.18■□□□□ 0.18
EPHB4-206ENST00000487222 FAM26FQ5R3K3 315 aa16.18■□□□□ 0.18
EPHB4-206ENST00000487222 APOA5Q6Q788 366 aa16.18■□□□□ 0.18
EPHB4-206ENST00000487222 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.18■□□□□ 0.183e-7■■■■□ 22.6
EPHB4-206ENST00000487222 BAIAP2L1Q9UHR4 511 aa16.18■□□□□ 0.18
EPHB4-206ENST00000487222 BUB1O43683 1085 aa16.17■□□□□ 0.18
EPHB4-206ENST00000487222 PDE8BO95263 885 aa16.17■□□□□ 0.18
EPHB4-206ENST00000487222 TBC1D8O95759 1140 aa16.17■□□□□ 0.18
EPHB4-206ENST00000487222 ALDH1B1P30837 517 aa16.17■□□□□ 0.18
EPHB4-206ENST00000487222 CASP14P31944 242 aa16.17■□□□□ 0.18
EPHB4-206ENST00000487222 GYG1P46976 350 aa16.17■□□□□ 0.18
EPHB4-206ENST00000487222 SLFN12Q8IYM2 578 aa16.17■□□□□ 0.18
EPHB4-206ENST00000487222 BCAS4Q8TDM0 211 aa16.17■□□□□ 0.18
EPHB4-206ENST00000487222 CCT6BQ92526 530 aa16.17■□□□□ 0.18
EPHB4-206ENST00000487222 RNF26Q9BY78 433 aaPredicted RBP16.17■□□□□ 0.18
EPHB4-206ENST00000487222 PANK4Q9NVE7 773 aa16.17■□□□□ 0.18
EPHB4-206ENST00000487222 GJA3Q9Y6H8 435 aa16.17■□□□□ 0.18
EPHB4-206ENST00000487222 TTC37Q6PGP7 1564 aa16.17■□□□□ 0.18
EPHB4-206ENST00000487222 TCP10Q12799 353 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms