RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 TBC1D8BQ0IIM8 1120 aa13.88□□□□□ -0.19
HSPG2-211ENST00000486901 PDCLQ13371 301 aa13.88□□□□□ -0.19
HSPG2-211ENST00000486901 PUM3Q15397 648 aaKnown RBP13.88□□□□□ -0.19
HSPG2-211ENST00000486901 CCDC155Q8N6L0 562 aa13.88□□□□□ -0.19
HSPG2-211ENST00000486901 GSDMAQ96QA5 445 aa13.88□□□□□ -0.19
HSPG2-211ENST00000486901 NAA15Q9BXJ9 866 aaKnown RBP13.88□□□□□ -0.19
HSPG2-211ENST00000486901 ARHGAP23Q9P227 1491 aa13.88□□□□□ -0.19
HSPG2-211ENST00000486901 IPO7O95373 1038 aaKnown RBP13.88□□□□□ -0.19
HSPG2-211ENST00000486901 USP5P45974 858 aa13.88□□□□□ -0.19
HSPG2-211ENST00000486901 MTIF2P46199 727 aaKnown RBP13.88□□□□□ -0.19
HSPG2-211ENST00000486901 SPATA20Q8TB22 786 aa13.88□□□□□ -0.19
HSPG2-211ENST00000486901 HNRNPLLQ8WVV9 542 aaKnown RBP13.88□□□□□ -0.19
HSPG2-211ENST00000486901 CNNM2Q9H8M5 875 aa13.88□□□□□ -0.19
HSPG2-211ENST00000486901 GOLGA6BA6NDN3 693 aa13.88□□□□□ -0.19
HSPG2-211ENST00000486901 FCER1AP12319 257 aa13.88□□□□□ -0.19
HSPG2-211ENST00000486901 SLC5A1P13866 664 aa13.88□□□□□ -0.19
HSPG2-211ENST00000486901 GUCY2FP51841 1108 aa13.88□□□□□ -0.19
HSPG2-211ENST00000486901 GNGT1P63211 74 aa13.88□□□□□ -0.19
HSPG2-211ENST00000486901 VGLL2Q8N8G2 317 aa13.88□□□□□ -0.19
HSPG2-211ENST00000486901 LPIN2Q92539 896 aa13.88□□□□□ -0.19
HSPG2-211ENST00000486901 ARL8AQ96BM9 186 aa13.88□□□□□ -0.19
HSPG2-211ENST00000486901 VAT1LQ9HCJ6 419 aa13.88□□□□□ -0.19
HSPG2-211ENST00000486901 POTEB2H3BUK9 544 aa13.87□□□□□ -0.19
HSPG2-211ENST00000486901 IRX3P78415 501 aaPredicted RBP13.87□□□□□ -0.19
HSPG2-211ENST00000486901 GIGYF2Q6Y7W6 1299 aaKnown RBP13.87□□□□□ -0.19
HSPG2-211ENST00000486901 ESR2Q92731 530 aa13.87□□□□□ -0.19
HSPG2-211ENST00000486901 PACSIN2Q9UNF0 486 aaPredicted RBP13.87□□□□□ -0.19
HSPG2-211ENST00000486901 CAPN6Q9Y6Q1 641 aa13.87□□□□□ -0.19
HSPG2-211ENST00000486901 PLEKHG2Q9H7P9 1386 aa13.87□□□□□ -0.19
HSPG2-211ENST00000486901 ATP2C2O75185 946 aa13.87□□□□□ -0.19
HSPG2-211ENST00000486901 KRT14P02533 472 aa13.87□□□□□ -0.19
HSPG2-211ENST00000486901 APBA1Q02410 837 aa13.87□□□□□ -0.19
HSPG2-211ENST00000486901 INF2Q27J81 1249 aa13.87□□□□□ -0.19
HSPG2-211ENST00000486901 CSGALNACT2Q8N6G5 542 aa13.87□□□□□ -0.19
HSPG2-211ENST00000486901 ZSCAN10Q96SZ4 725 aaPredicted RBP13.87□□□□□ -0.19
HSPG2-211ENST00000486901 GBP3Q9H0R5 595 aa13.87□□□□□ -0.19
HSPG2-211ENST00000486901 TMEM60Q9H2L4 133 aa13.87□□□□□ -0.19
HSPG2-211ENST00000486901 BRMS1Q9HCU9 246 aa13.87□□□□□ -0.19
HSPG2-211ENST00000486901 MAGEC2Q9UBF1 373 aaPredicted RBP13.87□□□□□ -0.19
HSPG2-211ENST00000486901 TRADDQ15628 312 aa13.87□□□□□ -0.19
HSPG2-211ENST00000486901 FAM182BQ5T319 152 aa13.87□□□□□ -0.19
HSPG2-211ENST00000486901 DZIP3Q86Y13 1208 aaKnown RBP13.87□□□□□ -0.19
HSPG2-211ENST00000486901 C2CD5Q86YS7 1000 aa13.87□□□□□ -0.19
HSPG2-211ENST00000486901 MB21D1Q8N884 522 aa13.87□□□□□ -0.19
HSPG2-211ENST00000486901 FAM76AQ8TAV0 307 aa13.87□□□□□ -0.19
HSPG2-211ENST00000486901 ACBD3Q9H3P7 528 aa13.87□□□□□ -0.19
HSPG2-211ENST00000486901 DEF6Q9H4E7 631 aa13.87□□□□□ -0.19
HSPG2-211ENST00000486901 MMRN2Q9H8L6 949 aa13.87□□□□□ -0.19
HSPG2-211ENST00000486901 NHEJ1Q9H9Q4 299 aaPredicted RBP13.87□□□□□ -0.19
HSPG2-211ENST00000486901 FAM205AQ6ZU69 1335 aa13.86□□□□□ -0.19
HSPG2-211ENST00000486901 AGPSO00116 658 aa13.86□□□□□ -0.19
HSPG2-211ENST00000486901 TRAPPC11Q7Z392 1133 aa13.86□□□□□ -0.19
HSPG2-211ENST00000486901 SLC51AQ86UW1 340 aa13.86□□□□□ -0.19
HSPG2-211ENST00000486901 MAGEB6P1A0A0J9YX57 407 aa13.86□□□□□ -0.19
HSPG2-211ENST00000486901 EPHB6O15197 1021 aa13.86□□□□□ -0.19
HSPG2-211ENST00000486901 MAGEA9P43362 315 aa13.86□□□□□ -0.19
HSPG2-211ENST00000486901 STAG2Q8N3U4 1231 aa13.86□□□□□ -0.19
HSPG2-211ENST00000486901 PHF20Q9BVI0 1012 aa13.86□□□□□ -0.19
HSPG2-211ENST00000486901 PSD3Q9NYI0 1048 aa13.86□□□□□ -0.19
HSPG2-211ENST00000486901 EXOC5O00471 708 aa13.86□□□□□ -0.19
HSPG2-211ENST00000486901 STARD3NLO95772 234 aa13.86□□□□□ -0.19
HSPG2-211ENST00000486901 ICE2Q659A1 982 aa13.86□□□□□ -0.19
HSPG2-211ENST00000486901 SH3RF1Q7Z6J0 888 aa13.86□□□□□ -0.19
HSPG2-211ENST00000486901 ZNF579Q8NAF0 562 aaKnown RBP13.86□□□□□ -0.19
HSPG2-211ENST00000486901 KAT2BQ92831 832 aa13.86□□□□□ -0.19
HSPG2-211ENST00000486901 SLC39A2Q9NP94 309 aa13.86□□□□□ -0.19
HSPG2-211ENST00000486901 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.86□□□□□ -0.19
HSPG2-211ENST00000486901 OVOS2A0A0G2JMS6 1433 aa13.85□□□□□ -0.19
HSPG2-211ENST00000486901 MYO1BO43795 1136 aa13.85□□□□□ -0.19
HSPG2-211ENST00000486901 UQCRFS1P1P0C7P4 283 aa13.85□□□□□ -0.19
HSPG2-211ENST00000486901 MNAT1P51948 309 aa13.85□□□□□ -0.19
HSPG2-211ENST00000486901 DYMQ7RTS9 669 aa13.85□□□□□ -0.19
HSPG2-211ENST00000486901 TSEN2Q8NCE0 465 aaKnown RBP13.85□□□□□ -0.19
HSPG2-211ENST00000486901 SLC4A9Q96Q91 983 aa13.85□□□□□ -0.19
HSPG2-211ENST00000486901 TUBGCP2Q9BSJ2 902 aa13.85□□□□□ -0.19
HSPG2-211ENST00000486901 TFCP2L1Q9NZI6 479 aa13.85□□□□□ -0.19
HSPG2-211ENST00000486901 ARFGEF2Q9Y6D5 1785 aa13.85□□□□□ -0.19
HSPG2-211ENST00000486901 UBA7P41226 1012 aa13.85□□□□□ -0.19
HSPG2-211ENST00000486901 SUSD4Q5VX71 490 aa13.85□□□□□ -0.19
HSPG2-211ENST00000486901 ANKRD18AQ8IVF6 992 aa13.85□□□□□ -0.19
HSPG2-211ENST00000486901 CTCFLQ8NI51 663 aaPredicted RBP13.85□□□□□ -0.19
HSPG2-211ENST00000486901 LRRC15Q8TF66 581 aa13.85□□□□□ -0.19
HSPG2-211ENST00000486901 STAG1Q8WVM7 1258 aa13.85□□□□□ -0.19
HSPG2-211ENST00000486901 TANGO6Q9C0B7 1094 aa13.85□□□□□ -0.19
HSPG2-211ENST00000486901 GOLPH3Q9H4A6 298 aa13.85□□□□□ -0.19
HSPG2-211ENST00000486901 NLRC4Q9NPP4 1024 aa13.85□□□□□ -0.19
HSPG2-211ENST00000486901 MAP3K15Q6ZN16 1313 aa13.85□□□□□ -0.19
HSPG2-211ENST00000486901 WDR19Q8NEZ3 1342 aa13.85□□□□□ -0.19
HSPG2-211ENST00000486901 PCDH11XQ9BZA7 1347 aa13.85□□□□□ -0.19
HSPG2-211ENST00000486901 PCDH11YQ9BZA8 1340 aa13.85□□□□□ -0.19
HSPG2-211ENST00000486901 IL2RBP14784 551 aa13.84□□□□□ -0.19
HSPG2-211ENST00000486901 SLC20A2Q08357 652 aa13.84□□□□□ -0.19
HSPG2-211ENST00000486901 CCDC181Q5TID7 509 aa13.84□□□□□ -0.19
HSPG2-211ENST00000486901 PDXDC2PQ6P474 469 aa13.84□□□□□ -0.19
HSPG2-211ENST00000486901 HEATR3Q7Z4Q2 680 aa13.84□□□□□ -0.19
HSPG2-211ENST00000486901 IQCA1Q86XH1 822 aa13.84□□□□□ -0.19
HSPG2-211ENST00000486901 CCDC42Q96M95 316 aa13.84□□□□□ -0.19
HSPG2-211ENST00000486901 ZNHIT6Q9NWK9 470 aaKnown RBP13.84□□□□□ -0.19
HSPG2-211ENST00000486901 LIMA1Q9UHB6 759 aaKnown RBP13.84□□□□□ -0.19
HSPG2-211ENST00000486901 RWDD2AQ9UIY3 292 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms