RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 LILRA6Q6PI73 481 aa7.29□□□□□ -1.24
SMC4-218ENST00000486711 GK5Q6ZS86 529 aa7.29□□□□□ -1.24
SMC4-218ENST00000486711 CEP128Q6ZU80 1094 aa7.29□□□□□ -1.24
SMC4-218ENST00000486711 RNF34Q969K3 372 aa7.29□□□□□ -1.24
SMC4-218ENST00000486711 IRF2BPLQ9H1B7 796 aa7.29□□□□□ -1.24
SMC4-218ENST00000486711 UBP1Q9NZI7 540 aa7.29□□□□□ -1.24
SMC4-218ENST00000486711 TMEM82A0PJX8 343 aa7.28□□□□□ -1.24
SMC4-218ENST00000486711 HRKO00198 91 aa7.28□□□□□ -1.24
SMC4-218ENST00000486711 FKTNO75072 461 aa7.28□□□□□ -1.24
SMC4-218ENST00000486711 ENDOUP21128 410 aaKnown RBP7.28□□□□□ -1.24
SMC4-218ENST00000486711 ERCC5P28715 1186 aaPredicted RBP7.28□□□□□ -1.24
SMC4-218ENST00000486711 MCM4P33991 863 aa7.28□□□□□ -1.24
SMC4-218ENST00000486711 ZNF76P36508 570 aa7.28□□□□□ -1.24
SMC4-218ENST00000486711 CLCQ05315 142 aa7.28□□□□□ -1.24
SMC4-218ENST00000486711 BBS9Q3SYG4 887 aa7.28□□□□□ -1.24
SMC4-218ENST00000486711 LDLRAD1Q5T700 205 aa7.28□□□□□ -1.24
SMC4-218ENST00000486711 SIRT2Q8IXJ6 389 aa7.28□□□□□ -1.24
SMC4-218ENST00000486711 PRDM14Q9GZV8 571 aa7.28□□□□□ -1.24
SMC4-218ENST00000486711 CNOT6Q9ULM6 557 aaKnown RBP7.28□□□□□ -1.24
SMC4-218ENST00000486711 MEIS3P2A8K0S8 358 aa7.27□□□□□ -1.25
SMC4-218ENST00000486711 RFXAPO00287 272 aa7.27□□□□□ -1.25
SMC4-218ENST00000486711 INHBBP09529 407 aa7.27□□□□□ -1.25
SMC4-218ENST00000486711 NME1P15531 152 aaKnown RBP7.27□□□□□ -1.25
SMC4-218ENST00000486711 NKD1Q969G9 470 aa7.27□□□□□ -1.25
SMC4-218ENST00000486711 HHIPL1Q96JK4 782 aa7.27□□□□□ -1.25
SMC4-218ENST00000486711 ZNF512BQ96KM6 892 aaPredicted RBP7.27□□□□□ -1.25
SMC4-218ENST00000486711 FCRL2Q96LA5 508 aaPredicted RBP7.27□□□□□ -1.25
SMC4-218ENST00000486711 NT5C1AQ9BXI3 368 aa7.27□□□□□ -1.25
SMC4-218ENST00000486711 MKRN2Q9H000 416 aaKnown RBP7.27□□□□□ -1.25
SMC4-218ENST00000486711 GCM1Q9NP62 436 aa7.27□□□□□ -1.25
SMC4-218ENST00000486711 CHST7Q9NS84 486 aa7.27□□□□□ -1.25
SMC4-218ENST00000486711 KRTAP9-7A8MTY7 169 aa7.26□□□□□ -1.25
SMC4-218ENST00000486711 TNFRSF10CO14798 259 aa7.26□□□□□ -1.25
SMC4-218ENST00000486711 EFEMP2O95967 443 aa7.26□□□□□ -1.25
SMC4-218ENST00000486711 HDLBPQ00341 1268 aaKnown RBP7.26□□□□□ -1.25
SMC4-218ENST00000486711 ZNF385BQ569K4 471 aa7.26□□□□□ -1.25
SMC4-218ENST00000486711 SLITRK4Q8IW52 837 aa7.26□□□□□ -1.25
SMC4-218ENST00000486711 TNFRSF10DQ9UBN6 386 aa7.26□□□□□ -1.25
SMC4-218ENST00000486711 PCDHB12Q9Y5F1 795 aa7.26□□□□□ -1.25
SMC4-218ENST00000486711 PNLIPP16233 465 aa7.25□□□□□ -1.25
SMC4-218ENST00000486711 RTP1P59025 263 aa7.25□□□□□ -1.25
SMC4-218ENST00000486711 FANCCQ00597 558 aa7.25□□□□□ -1.25
SMC4-218ENST00000486711 OLFML2BQ68BL8 750 aa7.25□□□□□ -1.25
SMC4-218ENST00000486711 SLC6A18Q96N87 628 aa7.25□□□□□ -1.25
SMC4-218ENST00000486711 SGPP1Q9BX95 441 aa7.25□□□□□ -1.25
SMC4-218ENST00000486711 PRR13Q9NZ81 148 aa7.25□□□□□ -1.25
SMC4-218ENST00000486711 KCTD3Q9Y597 815 aa7.25□□□□□ -1.25
SMC4-218ENST00000486711 ZC3H6P61129 1189 aaKnown RBP7.24□□□□□ -1.25
SMC4-218ENST00000486711 SRSF3P84103 164 aaKnown RBP7.24□□□□□ -1.25
SMC4-218ENST00000486711 C9orf131Q5VYM1 1079 aa7.24□□□□□ -1.25
SMC4-218ENST00000486711 GALNT18Q6P9A2 607 aa7.24□□□□□ -1.25
SMC4-218ENST00000486711 ZPBP2Q6X784 338 aa7.24□□□□□ -1.25
SMC4-218ENST00000486711 NT5DC4Q86YG4 428 aa7.24□□□□□ -1.25
SMC4-218ENST00000486711 KIAA0825Q8IV33 1275 aa7.24□□□□□ -1.25
SMC4-218ENST00000486711 TMEM151BQ8IW70 566 aa7.24□□□□□ -1.25
SMC4-218ENST00000486711 TMEM192Q8IY95 271 aa7.24□□□□□ -1.25
SMC4-218ENST00000486711 ANTXR1Q9H6X2 564 aa7.24□□□□□ -1.25
SMC4-218ENST00000486711 SIRT5Q9NXA8 310 aa7.24□□□□□ -1.25
SMC4-218ENST00000486711 GFOD1Q9NXC2 390 aa7.24□□□□□ -1.25
SMC4-218ENST00000486711 MBD1Q9UIS9 605 aaPredicted RBP7.24□□□□□ -1.25
SMC4-218ENST00000486711 FBXL21Q9UKT6 434 aa7.24□□□□□ -1.25
SMC4-218ENST00000486711 TAF6LQ9Y6J9 622 aa7.24□□□□□ -1.25
SMC4-218ENST00000486711 WTIPA6NIX2 430 aaPredicted RBP7.23□□□□□ -1.25
SMC4-218ENST00000486711 FADS2P1A8MWK0 482 aa7.23□□□□□ -1.25
SMC4-218ENST00000486711 ABLIM1O14639 778 aa7.23□□□□□ -1.25
SMC4-218ENST00000486711 BMP8BP34820 402 aa7.23□□□□□ -1.25
SMC4-218ENST00000486711 TCERG1LQ5VWI1 586 aa7.23□□□□□ -1.25
SMC4-218ENST00000486711 SPON2Q9BUD6 331 aa7.23□□□□□ -1.25
SMC4-218ENST00000486711 MINPP1Q9UNW1 487 aa7.23□□□□□ -1.25
SMC4-218ENST00000486711 GPR55Q9Y2T6 319 aaPredicted RBP7.23□□□□□ -1.25
SMC4-218ENST00000486711 MEIS1O00470 390 aa7.22□□□□□ -1.25
SMC4-218ENST00000486711 ZNF205O95201 554 aa7.22□□□□□ -1.25
SMC4-218ENST00000486711 ARL4AP40617 200 aa7.22□□□□□ -1.25
SMC4-218ENST00000486711 ERVFRD-1P60508 538 aa7.22□□□□□ -1.25
SMC4-218ENST00000486711 AUHQ13825 339 aaKnown RBP7.22□□□□□ -1.25
SMC4-218ENST00000486711 HSF5Q4G112 596 aaPredicted RBP7.22□□□□□ -1.25
SMC4-218ENST00000486711 EAF1Q96JC9 268 aaPredicted RBP7.22□□□□□ -1.25
SMC4-218ENST00000486711 SIGLEC10Q96LC7 697 aa7.22□□□□□ -1.25
SMC4-218ENST00000486711 DHRS1Q96LJ7 313 aa7.22□□□□□ -1.25
SMC4-218ENST00000486711 C8orf37Q96NL8 207 aa7.22□□□□□ -1.25
SMC4-218ENST00000486711 SLC9A7Q96T83 725 aa7.22□□□□□ -1.25
SMC4-218ENST00000486711 PLCD4Q9BRC7 762 aa7.22□□□□□ -1.25
SMC4-218ENST00000486711 CDADC1Q9BWV3 514 aa7.22□□□□□ -1.25
SMC4-218ENST00000486711 CCSER2Q9H7U1 834 aa7.22□□□□□ -1.25
SMC4-218ENST00000486711 IRAK3Q9Y616 596 aa7.22□□□□□ -1.25
SMC4-218ENST00000486711 IMPDH2P12268 514 aa7.21□□□□□ -1.26
SMC4-218ENST00000486711 VIPR1P32241 457 aa7.21□□□□□ -1.26
SMC4-218ENST00000486711 CTSWP56202 376 aa7.21□□□□□ -1.26
SMC4-218ENST00000486711 YBX1P67809 324 aaKnown RBP7.21□□□□□ -1.26
SMC4-218ENST00000486711 LAPTM5Q13571 262 aa7.21□□□□□ -1.26
SMC4-218ENST00000486711 SSPNQ14714 243 aa7.21□□□□□ -1.26
SMC4-218ENST00000486711 METTL16Q86W50 562 aaKnown RBP7.21□□□□□ -1.26
SMC4-218ENST00000486711 ERVK13-1Q9NX77 482 aa7.21□□□□□ -1.26
SMC4-218ENST00000486711 SUCOQ9UBS9 1254 aaKnown RBP7.21□□□□□ -1.26
SMC4-218ENST00000486711 A0A1W2PQ45 241 aaPredicted RBP7.2□□□□□ -1.26
SMC4-218ENST00000486711 A0A1W2PQY0 241 aa7.2□□□□□ -1.26
SMC4-218ENST00000486711 B8ZZF3 427 aa7.2□□□□□ -1.26
SMC4-218ENST00000486711 MPOP05164 745 aa7.2□□□□□ -1.26
SMC4-218ENST00000486711 PI3P19957 117 aa7.2□□□□□ -1.26
SMC4-218ENST00000486711 HOXA5P20719 270 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms