RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 FMNL1O95466 1100 aaPredicted RBP19.17■□□□□ 0.66
THBS3-207ENST00000486260 SLC10A3P09131 477 aa19.17■□□□□ 0.66
THBS3-207ENST00000486260 SMARCA1P28370 1054 aa19.17■□□□□ 0.66
THBS3-207ENST00000486260 SYDE2Q5VT97 1194 aa19.17■□□□□ 0.66
THBS3-207ENST00000486260 FASTKD5Q7L8L6 764 aaKnown RBP19.17■□□□□ 0.66
THBS3-207ENST00000486260 ADGRF4Q8IZF3 695 aa19.17■□□□□ 0.66
THBS3-207ENST00000486260 CHURC1Q8WUH1 139 aa19.17■□□□□ 0.66
THBS3-207ENST00000486260 V9GY48 417 aaPredicted RBP19.17■□□□□ 0.66
THBS3-207ENST00000486260 FAM155AB1AL88 458 aaPredicted RBP19.16■□□□□ 0.66
THBS3-207ENST00000486260 PLA2G6O60733 806 aa19.16■□□□□ 0.66
THBS3-207ENST00000486260 CETPP11597 493 aa19.16■□□□□ 0.66
THBS3-207ENST00000486260 FDPSP14324 419 aaKnown RBP19.16■□□□□ 0.66
THBS3-207ENST00000486260 GJB2P29033 226 aa19.16■□□□□ 0.66
THBS3-207ENST00000486260 CATSPERGQ6ZRH7 1159 aa19.16■□□□□ 0.66
THBS3-207ENST00000486260 FAM160B2Q86V87 743 aa19.16■□□□□ 0.66
THBS3-207ENST00000486260 CCDC102AQ96A19 550 aa19.16■□□□□ 0.66
THBS3-207ENST00000486260 KIFC2Q96AC6 838 aa19.16■□□□□ 0.66
THBS3-207ENST00000486260 JMJD4Q9H9V9 463 aa19.16■□□□□ 0.66
THBS3-207ENST00000486260 ORC3Q9UBD5 711 aaPredicted RBP19.16■□□□□ 0.66
THBS3-207ENST00000486260 PRR12Q9ULL5 1215 aa19.16■□□□□ 0.66
THBS3-207ENST00000486260 CCL15-CCL14A0A0B4J2E2 113 aa19.16■□□□□ 0.66
THBS3-207ENST00000486260 USP17L15C9J2P7 530 aa19.16■□□□□ 0.66
THBS3-207ENST00000486260 USP17L13C9JLJ4 530 aa19.16■□□□□ 0.66
THBS3-207ENST00000486260 USP17L11C9JVI0 530 aa19.16■□□□□ 0.66
THBS3-207ENST00000486260 USP17L18D6R9N7 530 aa19.16■□□□□ 0.66
THBS3-207ENST00000486260 USP17L22D6RA61 530 aa19.16■□□□□ 0.66
THBS3-207ENST00000486260 USP17L17D6RBQ6 530 aa19.16■□□□□ 0.66
THBS3-207ENST00000486260 USP17L19D6RCP7 530 aa19.16■□□□□ 0.66
THBS3-207ENST00000486260 USP17L20D6RJB6 530 aa19.16■□□□□ 0.66
THBS3-207ENST00000486260 PRPF3O43395 683 aaKnown RBP19.16■□□□□ 0.66
THBS3-207ENST00000486260 FLOT1O75955 427 aa19.16■□□□□ 0.66
THBS3-207ENST00000486260 HMGN5P82970 282 aaKnown RBP19.16■□□□□ 0.66
THBS3-207ENST00000486260 USP17L24Q0WX57 530 aa19.16■□□□□ 0.66
THBS3-207ENST00000486260 CCL15Q16663 113 aa19.16■□□□□ 0.66
THBS3-207ENST00000486260 GPAT2Q6NUI2 795 aa19.16■□□□□ 0.66
THBS3-207ENST00000486260 PAXIP1Q6ZW49 1069 aaPredicted RBP19.16■□□□□ 0.66
THBS3-207ENST00000486260 TRIM22Q8IYM9 498 aa19.16■□□□□ 0.66
THBS3-207ENST00000486260 BRI3BPQ8WY22 251 aa19.16■□□□□ 0.66
THBS3-207ENST00000486260 RNF26Q9BY78 433 aaPredicted RBP19.16■□□□□ 0.66
THBS3-207ENST00000486260 AGTPBP1Q9UPW5 1226 aa19.16■□□□□ 0.66
THBS3-207ENST00000486260 SNAP25P60880 206 aa19.15■□□□□ 0.66
THBS3-207ENST00000486260 AKAP17AQ02040 695 aaKnown RBP19.15■□□□□ 0.66
THBS3-207ENST00000486260 CYP4F22Q6NT55 531 aa19.15■□□□□ 0.66
THBS3-207ENST00000486260 HOMER1Q86YM7 354 aa19.15■□□□□ 0.66
THBS3-207ENST00000486260 PIGSQ96S52 555 aa19.15■□□□□ 0.66
THBS3-207ENST00000486260 SLF1Q9BQI6 1058 aa19.15■□□□□ 0.66
THBS3-207ENST00000486260 GRM1Q13255 1194 aa19.14■□□□□ 0.66
THBS3-207ENST00000486260 DEFB115Q30KQ5 88 aa19.14■□□□□ 0.66
THBS3-207ENST00000486260 PRPF38AQ8NAV1 312 aaKnown RBP19.14■□□□□ 0.66
THBS3-207ENST00000486260 RRP36Q96EU6 259 aaKnown RBP19.14■□□□□ 0.66
THBS3-207ENST00000486260 STK36Q9NRP7 1315 aa19.14■□□□□ 0.65
THBS3-207ENST00000486260 RASSF10A6NK89 507 aa19.14■□□□□ 0.65
THBS3-207ENST00000486260 HOXA7P31268 230 aaPredicted RBP19.14■□□□□ 0.65
THBS3-207ENST00000486260 PKN1Q16512 942 aa19.14■□□□□ 0.65
THBS3-207ENST00000486260 FAM184AQ8NB25 1140 aa19.14■□□□□ 0.65
THBS3-207ENST00000486260 MTMR8Q96EF0 704 aa19.14■□□□□ 0.65
THBS3-207ENST00000486260 PPP1R9AQ9ULJ8 1098 aa19.14■□□□□ 0.65
THBS3-207ENST00000486260 DEXIO95424 95 aa19.13■□□□□ 0.65
THBS3-207ENST00000486260 COG2Q14746 738 aa19.13■□□□□ 0.65
THBS3-207ENST00000486260 AIFM3Q96NN9 605 aa19.13■□□□□ 0.65
THBS3-207ENST00000486260 PTPN18Q99952 460 aa19.13■□□□□ 0.65
THBS3-207ENST00000486260 MANSC4A6NHS7 340 aaPredicted RBP19.12■□□□□ 0.65
THBS3-207ENST00000486260 BTBD19C9JJ37 291 aa19.12■□□□□ 0.65
THBS3-207ENST00000486260 DSG3P32926 999 aa19.12■□□□□ 0.65
THBS3-207ENST00000486260 HTRA3P83110 453 aa19.12■□□□□ 0.65
THBS3-207ENST00000486260 CDC37Q16543 378 aaPredicted RBP19.12■□□□□ 0.65
THBS3-207ENST00000486260 SEC63Q9UGP8 760 aaKnown RBP19.12■□□□□ 0.65
THBS3-207ENST00000486260 MYH6P13533 1939 aa19.12■□□□□ 0.65
THBS3-207ENST00000486260 RLFQ13129 1914 aa19.12■□□□□ 0.65
THBS3-207ENST00000486260 PARP14Q460N5 1801 aa19.11■□□□□ 0.65
THBS3-207ENST00000486260 TESPA1A2RU30 521 aaPredicted RBP19.11■□□□□ 0.65
THBS3-207ENST00000486260 FOSBP53539 338 aa19.11■□□□□ 0.65
THBS3-207ENST00000486260 IRX3P78415 501 aaPredicted RBP19.11■□□□□ 0.65
THBS3-207ENST00000486260 PABPC4Q13310 644 aaKnown RBP eCLIP19.11■□□□□ 0.65
THBS3-207ENST00000486260 ATG4CQ96DT6 458 aa19.11■□□□□ 0.65
THBS3-207ENST00000486260 ZIC5Q96T25 663 aa19.11■□□□□ 0.65
THBS3-207ENST00000486260 ASCC2Q9H1I8 757 aaPredicted RBP19.11■□□□□ 0.65
THBS3-207ENST00000486260 RBM27Q9P2N5 1060 aaKnown RBP19.11■□□□□ 0.65
THBS3-207ENST00000486260 PNMA6FA0A0J9YX94 578 aa19.11■□□□□ 0.65
THBS3-207ENST00000486260 ZBTB5O15062 677 aa19.11■□□□□ 0.65
THBS3-207ENST00000486260 SCG2P13521 617 aa19.11■□□□□ 0.65
THBS3-207ENST00000486260 PFKFB3Q16875 520 aaPredicted RBP19.11■□□□□ 0.65
THBS3-207ENST00000486260 QRICH1Q2TAL8 776 aa19.11■□□□□ 0.65
THBS3-207ENST00000486260 ANKRD23Q86SG2 305 aa19.11■□□□□ 0.65
THBS3-207ENST00000486260 FAM43AQ8N2R8 423 aa19.11■□□□□ 0.65
THBS3-207ENST00000486260 CAPNS2Q96L46 248 aa19.11■□□□□ 0.65
THBS3-207ENST00000486260 P2RX7Q99572 595 aaKnown RBP19.11■□□□□ 0.65
THBS3-207ENST00000486260 ALG1Q9BT22 464 aa19.11■□□□□ 0.65
THBS3-207ENST00000486260 RANBP17Q9H2T7 1088 aaKnown RBP19.11■□□□□ 0.65
THBS3-207ENST00000486260 CWC22Q9HCG8 908 aaKnown RBP19.11■□□□□ 0.65
THBS3-207ENST00000486260 HOXC10Q9NYD6 342 aa19.11■□□□□ 0.65
THBS3-207ENST00000486260 SPDYE16A6NNV3 312 aaPredicted RBP19.1■□□□□ 0.65
THBS3-207ENST00000486260 PDHXO00330 501 aa19.1■□□□□ 0.65
THBS3-207ENST00000486260 PPP1R11O60927 126 aaPredicted RBP19.1■□□□□ 0.65
THBS3-207ENST00000486260 OSBPP22059 807 aa19.1■□□□□ 0.65
THBS3-207ENST00000486260 CCDC174Q6PII3 467 aa19.1■□□□□ 0.65
THBS3-207ENST00000486260 WASF1Q92558 559 aa19.1■□□□□ 0.65
THBS3-207ENST00000486260 GPKOWQ92917 476 aaPredicted RBP eCLIP19.1■□□□□ 0.65
THBS3-207ENST00000486260 GJB4Q9NTQ9 266 aa19.1■□□□□ 0.65
THBS3-207ENST00000486260 VWA5AO00534 786 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms