RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 CCDC96Q2M329 555 aa20.85■□□□□ 0.93
COL6A1-204ENST00000486023 RASGRP2Q7LDG7 609 aa20.85■□□□□ 0.93
COL6A1-204ENST00000486023 NECAB2Q7Z6G3 386 aa20.85■□□□□ 0.93
COL6A1-204ENST00000486023 TBC1D10CQ8IV04 446 aa20.85■□□□□ 0.93
COL6A1-204ENST00000486023 ZKSCAN3Q9BRR0 538 aa20.85■□□□□ 0.93
COL6A1-204ENST00000486023 RIPK3Q9Y572 518 aa20.85■□□□□ 0.93
COL6A1-204ENST00000486023 SNAP25P60880 206 aa20.84■□□□□ 0.93
COL6A1-204ENST00000486023 PRAMEF19Q5SWL8 479 aa20.84■□□□□ 0.93
COL6A1-204ENST00000486023 UBE2Q1Q7Z7E8 422 aa20.84■□□□□ 0.93
COL6A1-204ENST00000486023 TEX13BQ9BXU2 312 aa20.84■□□□□ 0.93
COL6A1-204ENST00000486023 HOMER2Q9NSB8 354 aa20.84■□□□□ 0.93
COL6A1-204ENST00000486023 SYNPO2Q9UMS6 1093 aa20.84■□□□□ 0.93
COL6A1-204ENST00000486023 H0YGN5 161 aa20.83■□□□□ 0.93
COL6A1-204ENST00000486023 MYCNP04198 464 aaPredicted RBP20.83■□□□□ 0.93
COL6A1-204ENST00000486023 FGRP09769 529 aa20.83■□□□□ 0.93
COL6A1-204ENST00000486023 STAT2P52630 851 aa20.83■□□□□ 0.93
COL6A1-204ENST00000486023 ANO1Q5XXA6 986 aa20.83■□□□□ 0.93
COL6A1-204ENST00000486023 ABRAQ8N0Z2 381 aa20.83■□□□□ 0.93
COL6A1-204ENST00000486023 CHURC1Q8WUH1 139 aa20.83■□□□□ 0.93
COL6A1-204ENST00000486023 STAG1Q8WVM7 1258 aa20.83■□□□□ 0.93
COL6A1-204ENST00000486023 DDX11Q96FC9 970 aa20.83■□□□□ 0.93
COL6A1-204ENST00000486023 NBPF3Q9H094 633 aa20.83■□□□□ 0.93
COL6A1-204ENST00000486023 RNF41Q9H4P4 317 aaPredicted RBP20.83■□□□□ 0.93
COL6A1-204ENST00000486023 IMMTQ16891 758 aaKnown RBP20.82■□□□□ 0.92
COL6A1-204ENST00000486023 RCSD1Q6JBY9 416 aa20.82■□□□□ 0.92
COL6A1-204ENST00000486023 CCDC174Q6PII3 467 aa20.82■□□□□ 0.92
COL6A1-204ENST00000486023 TRPV1Q8NER1 839 aa20.82■□□□□ 0.92
COL6A1-204ENST00000486023 GMCL1Q96IK5 515 aa20.82■□□□□ 0.92
COL6A1-204ENST00000486023 MAML3Q96JK9 1138 aa20.82■□□□□ 0.92
COL6A1-204ENST00000486023 TMEM47Q9BQJ4 181 aa20.82■□□□□ 0.92
COL6A1-204ENST00000486023 IL25Q9H293 177 aa20.82■□□□□ 0.92
COL6A1-204ENST00000486023 SLC38A10Q9HBR0 1119 aa20.82■□□□□ 0.92
COL6A1-204ENST00000486023 OGDHLQ9ULD0 1010 aa20.82■□□□□ 0.92
COL6A1-204ENST00000486023 GREB1LQ9C091 1923 aaPredicted RBP20.82■□□□□ 0.92
COL6A1-204ENST00000486023 ZMYM6O95789 1325 aa20.81■□□□□ 0.92
COL6A1-204ENST00000486023 NEDD4P46934 1319 aa20.81■□□□□ 0.92
COL6A1-204ENST00000486023 FRMPD2Q68DX3 1309 aaPredicted RBP20.81■□□□□ 0.92
COL6A1-204ENST00000486023 RLFQ13129 1914 aa20.81■□□□□ 0.92
COL6A1-204ENST00000486023 EVI5O60447 810 aa20.81■□□□□ 0.92
COL6A1-204ENST00000486023 TOP1P11387 765 aaKnown RBP20.81■□□□□ 0.92
COL6A1-204ENST00000486023 COPB2P35606 906 aa20.81■□□□□ 0.92
COL6A1-204ENST00000486023 OLFML2BQ68BL8 750 aa20.81■□□□□ 0.92
COL6A1-204ENST00000486023 LHX8Q68G74 356 aa20.81■□□□□ 0.92
COL6A1-204ENST00000486023 FAM160B2Q86V87 743 aa20.81■□□□□ 0.92
COL6A1-204ENST00000486023 ANKLE1Q8NAG6 615 aa20.81■□□□□ 0.92
COL6A1-204ENST00000486023 ESR2Q92731 530 aa20.81■□□□□ 0.92
COL6A1-204ENST00000486023 C11orf49Q9H6J7 331 aa20.81■□□□□ 0.92
COL6A1-204ENST00000486023 GPCPD1Q9NPB8 672 aa20.81■□□□□ 0.92
COL6A1-204ENST00000486023 DDX20Q9UHI6 824 aaKnown RBP20.81■□□□□ 0.92
COL6A1-204ENST00000486023 CAPN2P17655 700 aa20.8■□□□□ 0.92
COL6A1-204ENST00000486023 SLC16A2P36021 539 aa20.8■□□□□ 0.92
COL6A1-204ENST00000486023 ANKRD35Q8N283 1001 aa20.8■□□□□ 0.92
COL6A1-204ENST00000486023 AGBL1Q96MI9 1066 aa20.8■□□□□ 0.92
COL6A1-204ENST00000486023 DSCC1Q9BVC3 393 aa20.8■□□□□ 0.92
COL6A1-204ENST00000486023 CTNNA3Q9UI47 895 aa20.8■□□□□ 0.92
COL6A1-204ENST00000486023 B4E1Z4 1266 aa20.79■□□□□ 0.92
COL6A1-204ENST00000486023 KDM4AO75164 1064 aa20.79■□□□□ 0.92
COL6A1-204ENST00000486023 TTBK2Q6IQ55 1244 aa20.79■□□□□ 0.92
COL6A1-204ENST00000486023 RUFY2Q8WXA3 655 aa20.79■□□□□ 0.92
COL6A1-204ENST00000486023 NR2E3Q9Y5X4 410 aa20.79■□□□□ 0.92
COL6A1-204ENST00000486023 PCP11498 1178 aaKnown RBP20.78■□□□□ 0.92
COL6A1-204ENST00000486023 ALAS1P13196 640 aa20.78■□□□□ 0.92
COL6A1-204ENST00000486023 CYBAP13498 195 aa20.78■□□□□ 0.92
COL6A1-204ENST00000486023 CHMLP26374 656 aa20.78■□□□□ 0.92
COL6A1-204ENST00000486023 MNX1P50219 401 aaPredicted RBP20.78■□□□□ 0.92
COL6A1-204ENST00000486023 ZNF792Q3KQV3 632 aa20.78■□□□□ 0.92
COL6A1-204ENST00000486023 SKAP1Q86WV1 359 aa20.78■□□□□ 0.92
COL6A1-204ENST00000486023 DCAF4Q8WV16 495 aa20.78■□□□□ 0.92
COL6A1-204ENST00000486023 TCP11L1Q9NUJ3 509 aa20.78■□□□□ 0.92
COL6A1-204ENST00000486023 PRR12Q9ULL5 1215 aa20.78■□□□□ 0.92
COL6A1-204ENST00000486023 A0A0G2JMZ2 1700 aa20.78■□□□□ 0.92
COL6A1-204ENST00000486023 MYH4Q9Y623 1939 aa20.77■□□□□ 0.92
COL6A1-204ENST00000486023 ATP2A1O14983 1001 aa20.77■□□□□ 0.92
COL6A1-204ENST00000486023 TINF2Q9BSI4 451 aa20.77■□□□□ 0.92
COL6A1-204ENST00000486023 FDX1P10109 184 aa20.76■□□□□ 0.91
COL6A1-204ENST00000486023 TAL1P17542 331 aaPredicted RBP20.76■□□□□ 0.91
COL6A1-204ENST00000486023 OAZ1P54368 228 aa20.76■□□□□ 0.91
COL6A1-204ENST00000486023 IQCA1Q86XH1 822 aa20.76■□□□□ 0.91
COL6A1-204ENST00000486023 C7orf61Q8IZ16 206 aa20.76■□□□□ 0.91
COL6A1-204ENST00000486023 CHST13Q8NET6 341 aa20.76■□□□□ 0.91
COL6A1-204ENST00000486023 TTC14Q96N46 770 aa20.76■□□□□ 0.91
COL6A1-204ENST00000486023 TRERF1Q96PN7 1200 aa20.76■□□□□ 0.91
COL6A1-204ENST00000486023 MSCO60682 206 aa20.75■□□□□ 0.91
COL6A1-204ENST00000486023 NOVP48745 357 aa20.75■□□□□ 0.91
COL6A1-204ENST00000486023 PTH1RQ03431 593 aa20.75■□□□□ 0.91
COL6A1-204ENST00000486023 GJC2Q5T442 439 aaPredicted RBP20.75■□□□□ 0.91
COL6A1-204ENST00000486023 SENP6Q9GZR1 1112 aaPredicted RBP20.75■□□□□ 0.91
COL6A1-204ENST00000486023 RNF146Q9NTX7 359 aa20.75■□□□□ 0.91
COL6A1-204ENST00000486023 ZSWIM5Q9P217 1185 aa20.75■□□□□ 0.91
COL6A1-204ENST00000486023 FBXO40Q9UH90 709 aa20.75■□□□□ 0.91
COL6A1-204ENST00000486023 COL11A1P12107 1806 aaPredicted RBP20.74■□□□□ 0.91
COL6A1-204ENST00000486023 GOLGA8HP0CJ92 632 aa20.74■□□□□ 0.91
COL6A1-204ENST00000486023 SYDE2Q5VT97 1194 aa20.74■□□□□ 0.91
COL6A1-204ENST00000486023 CHRDL2Q6WN34 429 aa20.74■□□□□ 0.91
COL6A1-204ENST00000486023 ZSCAN10Q96SZ4 725 aaPredicted RBP20.74■□□□□ 0.91
COL6A1-204ENST00000486023 KRT23Q9C075 422 aa20.74■□□□□ 0.91
COL6A1-204ENST00000486023 ACAD9Q9H845 621 aa20.74■□□□□ 0.91
COL6A1-204ENST00000486023 KAT14Q9H8E8 782 aa20.74■□□□□ 0.91
COL6A1-204ENST00000486023 CCPG1Q9ULG6 757 aa20.74■□□□□ 0.91
COL6A1-204ENST00000486023 COLQQ9Y215 455 aaPredicted RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms