RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 TNS4Q8IZW8 715 aa13.86□□□□□ -0.19
HPS4-214ENST00000485842 IGDCC4Q8TDY8 1250 aa13.86□□□□□ -0.19
HPS4-214ENST00000485842 COA7Q96BR5 231 aa13.86□□□□□ -0.19
HPS4-214ENST00000485842 TMEM87BQ96K49 555 aa13.86□□□□□ -0.19
HPS4-214ENST00000485842 MOV10L1Q9BXT6 1211 aaKnown RBP13.86□□□□□ -0.19
HPS4-214ENST00000485842 SPATC1LQ9H0A9 340 aa13.86□□□□□ -0.19
HPS4-214ENST00000485842 LY9Q9HBG7 655 aa13.86□□□□□ -0.19
HPS4-214ENST00000485842 CCDC69A6NI79 296 aa13.85□□□□□ -0.19
HPS4-214ENST00000485842 EIF5BO60841 1220 aaKnown RBP13.85□□□□□ -0.19
HPS4-214ENST00000485842 SEC24BO95487 1268 aa13.85□□□□□ -0.19
HPS4-214ENST00000485842 MAPK4P31152 587 aa13.85□□□□□ -0.19
HPS4-214ENST00000485842 SNAP25P60880 206 aa13.85□□□□□ -0.19
HPS4-214ENST00000485842 TMEM132BQ14DG7 1078 aa13.85□□□□□ -0.19
HPS4-214ENST00000485842 GPATCH4Q5T3I0 446 aaKnown RBP13.85□□□□□ -0.19
HPS4-214ENST00000485842 SYDE2Q5VT97 1194 aa13.85□□□□□ -0.19
HPS4-214ENST00000485842 BLOC1S2Q6QNY1 142 aa13.85□□□□□ -0.19
HPS4-214ENST00000485842 CPXCR1Q8N123 301 aa13.85□□□□□ -0.19
HPS4-214ENST00000485842 REPS2Q8NFH8 660 aa13.85□□□□□ -0.19
HPS4-214ENST00000485842 CPVLQ9H3G5 476 aa13.85□□□□□ -0.19
HPS4-214ENST00000485842 SRRDQ9UH36 339 aa13.85□□□□□ -0.19
HPS4-214ENST00000485842 PRR12Q9ULL5 1215 aa13.85□□□□□ -0.19
HPS4-214ENST00000485842 ADAMTS5Q9UNA0 930 aa13.85□□□□□ -0.19
HPS4-214ENST00000485842 PLXNB2O15031 1838 aa13.85□□□□□ -0.19
HPS4-214ENST00000485842 DOCK3Q8IZD9 2030 aa13.85□□□□□ -0.19
HPS4-214ENST00000485842 PLA2G6O60733 806 aa13.84□□□□□ -0.19
HPS4-214ENST00000485842 GNRH1P01148 92 aa13.84□□□□□ -0.19
HPS4-214ENST00000485842 HMGB1P09429 215 aaKnown RBP13.84□□□□□ -0.19
HPS4-214ENST00000485842 PARP1P09874 1014 aaKnown RBP13.84□□□□□ -0.19
HPS4-214ENST00000485842 ERCC3P19447 782 aa13.84□□□□□ -0.19
HPS4-214ENST00000485842 CASTP20810 708 aaKnown RBP13.84□□□□□ -0.19
HPS4-214ENST00000485842 PSMA5P28066 241 aa13.84□□□□□ -0.19
HPS4-214ENST00000485842 HOXD10P28358 340 aa13.84□□□□□ -0.19
HPS4-214ENST00000485842 FGD1P98174 961 aa13.84□□□□□ -0.19
HPS4-214ENST00000485842 PRKCZQ05513 592 aa13.84□□□□□ -0.19
HPS4-214ENST00000485842 ASPRV1Q53RT3 343 aa13.84□□□□□ -0.19
HPS4-214ENST00000485842 SNRNP48Q6IEG0 339 aaKnown RBP13.84□□□□□ -0.19
HPS4-214ENST00000485842 FBXO46Q6PJ61 603 aaPredicted RBP13.84□□□□□ -0.19
HPS4-214ENST00000485842 DHX32Q7L7V1 743 aaKnown RBP13.84□□□□□ -0.19
HPS4-214ENST00000485842 GPR142Q7Z601 462 aa13.84□□□□□ -0.19
HPS4-214ENST00000485842 CATIPQ7Z7H3 387 aa13.84□□□□□ -0.19
HPS4-214ENST00000485842 NCAPG2Q86XI2 1143 aa13.84□□□□□ -0.19
HPS4-214ENST00000485842 NUP133Q8WUM0 1156 aa13.84□□□□□ -0.19
HPS4-214ENST00000485842 MTA3Q9BTC8 594 aa13.84□□□□□ -0.19
HPS4-214ENST00000485842 MYL10Q9BUA6 226 aa13.84□□□□□ -0.19
HPS4-214ENST00000485842 UBA5Q9GZZ9 404 aa13.84□□□□□ -0.19
HPS4-214ENST00000485842 SLC38A10Q9HBR0 1119 aa13.84□□□□□ -0.19
HPS4-214ENST00000485842 RAVER2Q9HCJ3 691 aaKnown RBP13.84□□□□□ -0.19
HPS4-214ENST00000485842 ZNF214Q9UL59 606 aaPredicted RBP13.84□□□□□ -0.19
HPS4-214ENST00000485842 GABRQQ9UN88 632 aa13.84□□□□□ -0.19
HPS4-214ENST00000485842 PTPN22Q9Y2R2 807 aa13.84□□□□□ -0.19
HPS4-214ENST00000485842 PTCH2Q9Y6C5 1203 aa13.84□□□□□ -0.19
HPS4-214ENST00000485842 WDR19Q8NEZ3 1342 aa13.84□□□□□ -0.19
HPS4-214ENST00000485842 DHX16O60231 1041 aaKnown RBP13.83□□□□□ -0.2
HPS4-214ENST00000485842 STAT3P40763 770 aa13.83□□□□□ -0.2
HPS4-214ENST00000485842 EXOSC10Q01780 885 aaKnown RBP13.83□□□□□ -0.2
HPS4-214ENST00000485842 PKN2Q16513 984 aaKnown RBP13.83□□□□□ -0.2
HPS4-214ENST00000485842 CCDC174Q6PII3 467 aa13.83□□□□□ -0.2
HPS4-214ENST00000485842 BTNL9Q6UXG8 535 aa13.83□□□□□ -0.2
HPS4-214ENST00000485842 PLEKHH3Q7Z736 793 aa13.83□□□□□ -0.2
HPS4-214ENST00000485842 RAB11FIP4Q86YS3 637 aa13.83□□□□□ -0.2
HPS4-214ENST00000485842 RIOX2Q8IUF8 465 aa13.83□□□□□ -0.2
HPS4-214ENST00000485842 ZNF654Q8IZM8 581 aa13.83□□□□□ -0.2
HPS4-214ENST00000485842 RAET1EQ8TD07 263 aa13.83□□□□□ -0.2
HPS4-214ENST00000485842 TEX13BQ9BXU2 312 aa13.83□□□□□ -0.2
HPS4-214ENST00000485842 IVNS1ABPQ9Y6Y0 642 aa13.83□□□□□ -0.2
HPS4-214ENST00000485842 DDAH1O94760 285 aa13.82□□□□□ -0.2
HPS4-214ENST00000485842 FDX1P10109 184 aa13.82□□□□□ -0.2
HPS4-214ENST00000485842 RXRAP19793 462 aa13.82□□□□□ -0.2
HPS4-214ENST00000485842 RPS6KB1P23443 525 aa13.82□□□□□ -0.2
HPS4-214ENST00000485842 LIFRP42702 1097 aa13.82□□□□□ -0.2
HPS4-214ENST00000485842 FLT3LGP49771 235 aa13.82□□□□□ -0.2
HPS4-214ENST00000485842 PRMT2P55345 433 aa13.82□□□□□ -0.2
HPS4-214ENST00000485842 GRM4Q14833 912 aa13.82□□□□□ -0.2
HPS4-214ENST00000485842 TMTC2Q8N394 836 aa13.82□□□□□ -0.2
HPS4-214ENST00000485842 STAG2Q8N3U4 1231 aa13.82□□□□□ -0.2
HPS4-214ENST00000485842 SHCBP1Q8NEM2 672 aa13.82□□□□□ -0.2
HPS4-214ENST00000485842 KLRF2D3W0D1 207 aa13.81□□□□□ -0.2
HPS4-214ENST00000485842 SLC25A27O95847 323 aa13.81□□□□□ -0.2
HPS4-214ENST00000485842 TAL1P17542 331 aaPredicted RBP13.81□□□□□ -0.2
HPS4-214ENST00000485842 COPB2P35606 906 aa13.81□□□□□ -0.2
HPS4-214ENST00000485842 TROAPQ12815 778 aa13.81□□□□□ -0.2
HPS4-214ENST00000485842 Q6ZUG5 572 aa13.81□□□□□ -0.2
HPS4-214ENST00000485842 MICU3Q86XE3 530 aa13.81□□□□□ -0.2
HPS4-214ENST00000485842 CCDC144CPQ8IYA2 1237 aa13.81□□□□□ -0.2
HPS4-214ENST00000485842 CTCFLQ8NI51 663 aaPredicted RBP13.81□□□□□ -0.2
HPS4-214ENST00000485842 AGBL1Q96MI9 1066 aa13.81□□□□□ -0.2
HPS4-214ENST00000485842 NUDT12Q9BQG2 462 aa13.81□□□□□ -0.2
HPS4-214ENST00000485842 UPF3BQ9BZI7 483 aaKnown RBP13.81□□□□□ -0.2
HPS4-214ENST00000485842 RANBP17Q9H2T7 1088 aaKnown RBP13.81□□□□□ -0.2
HPS4-214ENST00000485842 MROH8Q9H579 483 aa13.81□□□□□ -0.2
HPS4-214ENST00000485842 VAT1LQ9HCJ6 419 aa13.81□□□□□ -0.2
HPS4-214ENST00000485842 HOMER2Q9NSB8 354 aa13.81□□□□□ -0.2
HPS4-214ENST00000485842 MAD2L2Q9UI95 211 aa13.81□□□□□ -0.2
HPS4-214ENST00000485842 NAP1L2Q9ULW6 460 aaPredicted RBP13.81□□□□□ -0.2
HPS4-214ENST00000485842 HPS5Q9UPZ3 1129 aa13.81□□□□□ -0.2
HPS4-214ENST00000485842 SLC12A7Q9Y666 1083 aa13.81□□□□□ -0.2
HPS4-214ENST00000485842 MYH6P13533 1939 aa13.8□□□□□ -0.2
HPS4-214ENST00000485842 KLF18A0A0U1RQI7 1052 aa13.8□□□□□ -0.2
HPS4-214ENST00000485842 ATP2A1O14983 1001 aa13.8□□□□□ -0.2
HPS4-214ENST00000485842 ALAS1P13196 640 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms