RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 STAT2P52630 851 aa18.41■□□□□ 0.54
APOE-205ENST00000485628 CYP4F22Q6NT55 531 aa18.41■□□□□ 0.54
APOE-205ENST00000485628 ADGRF4Q8IZF3 695 aa18.41■□□□□ 0.54
APOE-205ENST00000485628 CHURC1Q8WUH1 139 aa18.41■□□□□ 0.54
APOE-205ENST00000485628 CHMP4CQ96CF2 233 aa18.41■□□□□ 0.54
APOE-205ENST00000485628 UBA5Q9GZZ9 404 aa18.41■□□□□ 0.54
APOE-205ENST00000485628 CPVLQ9H3G5 476 aa18.41■□□□□ 0.54
APOE-205ENST00000485628 JMJD4Q9H9V9 463 aa18.41■□□□□ 0.54
APOE-205ENST00000485628 ZCCHC17Q9NP64 241 aaKnown RBP18.41■□□□□ 0.54
APOE-205ENST00000485628 GPCPD1Q9NPB8 672 aa18.41■□□□□ 0.54
APOE-205ENST00000485628 FBXO28Q9NVF7 368 aa18.41■□□□□ 0.54
APOE-205ENST00000485628 PPP1R9AQ9ULJ8 1098 aa18.41■□□□□ 0.54
APOE-205ENST00000485628 MTMR7Q9Y216 660 aa18.41■□□□□ 0.54
APOE-205ENST00000485628 CCL15-CCL14A0A0B4J2E2 113 aa18.4■□□□□ 0.54
APOE-205ENST00000485628 PRPF3O43395 683 aaKnown RBP18.4■□□□□ 0.54
APOE-205ENST00000485628 DSG3P32926 999 aa18.4■□□□□ 0.54
APOE-205ENST00000485628 SLC16A2P36021 539 aa18.4■□□□□ 0.54
APOE-205ENST00000485628 COG2Q14746 738 aa18.4■□□□□ 0.54
APOE-205ENST00000485628 PKN1Q16512 942 aa18.4■□□□□ 0.54
APOE-205ENST00000485628 CCL15Q16663 113 aa18.4■□□□□ 0.54
APOE-205ENST00000485628 CCDC96Q2M329 555 aa18.4■□□□□ 0.54
APOE-205ENST00000485628 CMTR1Q8N1G2 835 aaKnown RBP18.4■□□□□ 0.54
APOE-205ENST00000485628 PRPF38AQ8NAV1 312 aaKnown RBP18.4■□□□□ 0.54
APOE-205ENST00000485628 REPS2Q8NFH8 660 aa18.4■□□□□ 0.54
APOE-205ENST00000485628 CAPNS2Q96L46 248 aa18.4■□□□□ 0.54
APOE-205ENST00000485628 RNF26Q9BY78 433 aaPredicted RBP18.4■□□□□ 0.54
APOE-205ENST00000485628 PRR12Q9ULL5 1215 aa18.4■□□□□ 0.54
APOE-205ENST00000485628 NAP1L2Q9ULW6 460 aaPredicted RBP18.4■□□□□ 0.54
APOE-205ENST00000485628 FMNL1O95466 1100 aaPredicted RBP18.39■□□□□ 0.53
APOE-205ENST00000485628 HSPA6P17066 643 aa18.39■□□□□ 0.53
APOE-205ENST00000485628 MKRN3Q13064 507 aaKnown RBP18.39■□□□□ 0.53
APOE-205ENST00000485628 NOGQ13253 232 aa18.39■□□□□ 0.53
APOE-205ENST00000485628 SYDE2Q5VT97 1194 aa18.39■□□□□ 0.53
APOE-205ENST00000485628 GADL1Q6ZQY3 521 aa18.39■□□□□ 0.53
APOE-205ENST00000485628 FAM43AQ8N2R8 423 aa18.39■□□□□ 0.53
APOE-205ENST00000485628 SLF1Q9BQI6 1058 aa18.39■□□□□ 0.53
APOE-205ENST00000485628 RANBP17Q9H2T7 1088 aaKnown RBP18.39■□□□□ 0.53
APOE-205ENST00000485628 HOXC10Q9NYD6 342 aa18.39■□□□□ 0.53
APOE-205ENST00000485628 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.39■□□□□ 0.53
APOE-205ENST00000485628 STK36Q9NRP7 1315 aa18.39■□□□□ 0.53
APOE-205ENST00000485628 MYH6P13533 1939 aa18.39■□□□□ 0.53
APOE-205ENST00000485628 SMCHD1A6NHR9 2005 aa18.39■□□□□ 0.53
APOE-205ENST00000485628 SPDYE16A6NNV3 312 aaPredicted RBP18.38■□□□□ 0.53
APOE-205ENST00000485628 IGF2BP3O00425 579 aaKnown RBP eCLIP18.38■□□□□ 0.53
APOE-205ENST00000485628 RAD21O60216 631 aa18.38■□□□□ 0.53
APOE-205ENST00000485628 FDX1P10109 184 aa18.38■□□□□ 0.53
APOE-205ENST00000485628 P2RX7Q99572 595 aaKnown RBP18.38■□□□□ 0.53
APOE-205ENST00000485628 ASCC2Q9H1I8 757 aaPredicted RBP18.38■□□□□ 0.53
APOE-205ENST00000485628 SLC38A10Q9HBR0 1119 aa18.38■□□□□ 0.53
APOE-205ENST00000485628 COL11A1P12107 1806 aaPredicted RBP18.37■□□□□ 0.53
APOE-205ENST00000485628 VWA5AO00534 786 aa18.37■□□□□ 0.53
APOE-205ENST00000485628 ATP2A1O14983 1001 aa18.37■□□□□ 0.53
APOE-205ENST00000485628 JAK2O60674 1132 aa18.37■□□□□ 0.53
APOE-205ENST00000485628 FLOT1O75955 427 aa18.37■□□□□ 0.53
APOE-205ENST00000485628 MAP2K2P36507 400 aa18.37■□□□□ 0.53
APOE-205ENST00000485628 ANP32AP39687 249 aaKnown RBP18.37■□□□□ 0.53
APOE-205ENST00000485628 HTRA3P83110 453 aa18.37■□□□□ 0.53
APOE-205ENST00000485628 KIF23Q02241 960 aaPredicted RBP18.37■□□□□ 0.53
APOE-205ENST00000485628 BECN1Q14457 450 aa18.37■□□□□ 0.53
APOE-205ENST00000485628 IFNL1Q8IU54 200 aa18.37■□□□□ 0.53
APOE-205ENST00000485628 REM2Q8IYK8 340 aaPredicted RBP18.37■□□□□ 0.53
APOE-205ENST00000485628 PHKBQ93100 1093 aa18.37■□□□□ 0.53
APOE-205ENST00000485628 TANGO6Q9C0B7 1094 aa18.37■□□□□ 0.53
APOE-205ENST00000485628 V9GY48 417 aaPredicted RBP18.37■□□□□ 0.53
APOE-205ENST00000485628 ZNF536O15090 1300 aa18.37■□□□□ 0.53
APOE-205ENST00000485628 ADGRA2Q96PE1 1338 aa18.37■□□□□ 0.53
APOE-205ENST00000485628 WDR33Q9C0J8 1336 aaKnown RBP18.37■□□□□ 0.53
APOE-205ENST00000485628 PTPDC1A2A3K4 754 aa18.36■□□□□ 0.53
APOE-205ENST00000485628 PDHXO00330 501 aa18.36■□□□□ 0.53
APOE-205ENST00000485628 CPLX1O14810 134 aa18.36■□□□□ 0.53
APOE-205ENST00000485628 PPP1R11O60927 126 aaPredicted RBP18.36■□□□□ 0.53
APOE-205ENST00000485628 CDKL5O76039 1030 aa18.36■□□□□ 0.53
APOE-205ENST00000485628 VEGFBP49765 207 aa18.36■□□□□ 0.53
APOE-205ENST00000485628 PABPC4Q13310 644 aaKnown RBP eCLIP18.36■□□□□ 0.53
APOE-205ENST00000485628 CPLX2Q6PUV4 134 aaKnown RBP18.36■□□□□ 0.53
APOE-205ENST00000485628 SHISA4Q96DD7 197 aa18.36■□□□□ 0.53
APOE-205ENST00000485628 PNMA6FA0A0J9YX94 578 aa18.35■□□□□ 0.53
APOE-205ENST00000485628 ZBTB5O15062 677 aa18.35■□□□□ 0.53
APOE-205ENST00000485628 DTNBO60941 627 aa18.35■□□□□ 0.53
APOE-205ENST00000485628 AOC2O75106 756 aa18.35■□□□□ 0.53
APOE-205ENST00000485628 CNMDO75829 334 aa18.35■□□□□ 0.53
APOE-205ENST00000485628 HERVK_113P62684 666 aa18.35■□□□□ 0.53
APOE-205ENST00000485628 HMGN5P82970 282 aaKnown RBP18.35■□□□□ 0.53
APOE-205ENST00000485628 SSRP1Q08945 709 aaKnown RBP18.35■□□□□ 0.53
APOE-205ENST00000485628 SREBF2Q12772 1141 aa18.35■□□□□ 0.53
APOE-205ENST00000485628 PFKFB3Q16875 520 aaPredicted RBP18.35■□□□□ 0.53
APOE-205ENST00000485628 CCDC82Q8N4S0 544 aa18.35■□□□□ 0.53
APOE-205ENST00000485628 RGS22Q8NE09 1264 aa18.35■□□□□ 0.53
APOE-205ENST00000485628 ATG4CQ96DT6 458 aa18.35■□□□□ 0.53
APOE-205ENST00000485628 PIGSQ96S52 555 aa18.35■□□□□ 0.53
APOE-205ENST00000485628 RBM27Q9P2N5 1060 aaKnown RBP18.35■□□□□ 0.53
APOE-205ENST00000485628 ZNF214Q9UL59 606 aaPredicted RBP18.35■□□□□ 0.53
APOE-205ENST00000485628 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.35■□□□□ 0.53
APOE-205ENST00000485628 DEXIO95424 95 aa18.34■□□□□ 0.53
APOE-205ENST00000485628 OSBPP22059 807 aa18.34■□□□□ 0.53
APOE-205ENST00000485628 DDIT3P35638 169 aa18.34■□□□□ 0.53
APOE-205ENST00000485628 OAZ1P54368 228 aa18.34■□□□□ 0.53
APOE-205ENST00000485628 QRICH1Q2TAL8 776 aa18.34■□□□□ 0.53
APOE-205ENST00000485628 MB21D1Q8N884 522 aa18.34■□□□□ 0.53
APOE-205ENST00000485628 KIFC2Q96AC6 838 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms