RNA–Protein interactions for RNA: ENST00000485365.1

SFPQ-208, Transcript of splicing factor proline and glutamine rich, human

TSL 2

Gene SFPQ, Length 693 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFPQ-208	ENST00000485365	ZNF281	Q9Y2X9	895 aa		7.26	□□□□□ -1.25
SFPQ-208	ENST00000485365	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	7.26	□□□□□ -1.25
SFPQ-208	ENST00000485365	SCAPER	Q9BY12	1400 aa		7.26	□□□□□ -1.25
SFPQ-208	ENST00000485365	CFAP43	Q8NDM7	1665 aa		7.25	□□□□□ -1.25
SFPQ-208	ENST00000485365	PCF11	O94913	1555 aa	Known RBP	7.25	□□□□□ -1.25
SFPQ-208	ENST00000485365	CCDC18	Q5T9S5	1454 aa		7.25	□□□□□ -1.25
SFPQ-208	ENST00000485365	PHLDB1	Q86UU1	1377 aa		7.25	□□□□□ -1.25
SFPQ-208	ENST00000485365	RBM47	A0AV96	593 aa	Known RBP	7.25	□□□□□ -1.25
SFPQ-208	ENST00000485365	SLC22A31	A6NKX4	558 aa		7.25	□□□□□ -1.25
SFPQ-208	ENST00000485365	UPK3BL1	B0FP48	263 aa		7.25	□□□□□ -1.25
SFPQ-208	ENST00000485365	UPK3BL2	E5RIL1	263 aa		7.25	□□□□□ -1.25
SFPQ-208	ENST00000485365	HRK	O00198	91 aa		7.25	□□□□□ -1.25
SFPQ-208	ENST00000485365	CELA3B	P08861	270 aa		7.25	□□□□□ -1.25
SFPQ-208	ENST00000485365	LIG3	P49916	1009 aa		7.25	□□□□□ -1.25
SFPQ-208	ENST00000485365	AFF3	P51826	1226 aa	Known RBP	7.25	□□□□□ -1.25
SFPQ-208	ENST00000485365	SRSF3	P84103	164 aa	Known RBP	7.25	□□□□□ -1.25
SFPQ-208	ENST00000485365	RPL6	Q02878	288 aa	Known RBP	7.25	□□□□□ -1.25
SFPQ-208	ENST00000485365	FEZF2	Q8TBJ5	459 aa		7.25	□□□□□ -1.25
SFPQ-208	ENST00000485365	MIR1-1HG	Q9H1L0	117 aa		7.25	□□□□□ -1.25
SFPQ-208	ENST00000485365	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	7.25	□□□□□ -1.25
SFPQ-208	ENST00000485365	CORIN	Q9Y5Q5	1042 aa		7.25	□□□□□ -1.25
SFPQ-208	ENST00000485365	PLCH2	O75038	1416 aa		7.25	□□□□□ -1.25
SFPQ-208	ENST00000485365	PPRC1	Q5VV67	1664 aa	Known RBP	7.25	□□□□□ -1.25
SFPQ-208	ENST00000485365	DENND4B	O75064	1496 aa	Predicted RBP	7.24	□□□□□ -1.25
SFPQ-208	ENST00000485365	FYCO1	Q9BQS8	1478 aa		7.24	□□□□□ -1.25
SFPQ-208	ENST00000485365	CCNB3	Q8WWL7	1395 aa		7.24	□□□□□ -1.25
SFPQ-208	ENST00000485365	ARHGAP5	Q13017	1502 aa		7.24	□□□□□ -1.25
SFPQ-208	ENST00000485365	MAP3K11	Q16584	847 aa		7.24	□□□□□ -1.25
SFPQ-208	ENST00000485365	TSNAXIP1	Q2TAA8	658 aa		7.24	□□□□□ -1.25
SFPQ-208	ENST00000485365	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	7.24	□□□□□ -1.25
SFPQ-208	ENST00000485365	FAM13C	Q8NE31	585 aa		7.24	□□□□□ -1.25
SFPQ-208	ENST00000485365	NEO1	Q92859	1461 aa		7.24	□□□□□ -1.25
SFPQ-208	ENST00000485365	ABCA9	Q8IUA7	1624 aa		7.23	□□□□□ -1.25
SFPQ-208	ENST00000485365	TFE3	P19532	575 aa	Predicted RBP	7.23	□□□□□ -1.25
SFPQ-208	ENST00000485365	ASB16	Q96NS5	453 aa		7.23	□□□□□ -1.25
SFPQ-208	ENST00000485365	CNTD2	Q9H8S5	307 aa		7.23	□□□□□ -1.25
SFPQ-208	ENST00000485365	ADGRL1	O94910	1474 aa		7.23	□□□□□ -1.25
SFPQ-208	ENST00000485365	TTC37	Q6PGP7	1564 aa		7.22	□□□□□ -1.25
SFPQ-208	ENST00000485365	USP2	O75604	605 aa	Predicted RBP	7.22	□□□□□ -1.25
SFPQ-208	ENST00000485365	ADRB1	P08588	477 aa		7.22	□□□□□ -1.25
SFPQ-208	ENST00000485365	FRMD6	Q96NE9	622 aa		7.22	□□□□□ -1.25
SFPQ-208	ENST00000485365	SIRT5	Q9NXA8	310 aa		7.22	□□□□□ -1.25
SFPQ-208	ENST00000485365	ZNF644	Q9H582	1327 aa	Predicted RBP	7.22	□□□□□ -1.25
SFPQ-208	ENST00000485365	VPS8	Q8N3P4	1428 aa		7.21	□□□□□ -1.25
SFPQ-208	ENST00000485365	KIF14	Q15058	1648 aa		7.21	□□□□□ -1.26
SFPQ-208	ENST00000485365	IRS4	O14654	1257 aa	Predicted RBP	7.21	□□□□□ -1.26
SFPQ-208	ENST00000485365	N4BP3	O15049	544 aa		7.21	□□□□□ -1.26
SFPQ-208	ENST00000485365	PLCG1	P19174	1290 aa		7.21	□□□□□ -1.26
SFPQ-208	ENST00000485365	EIF4B	P23588	611 aa	Known RBP	7.21	□□□□□ -1.26
SFPQ-208	ENST00000485365	VIPR1	P32241	457 aa		7.21	□□□□□ -1.26
SFPQ-208	ENST00000485365	YARS	P54577	528 aa	Known RBP	7.21	□□□□□ -1.26
SFPQ-208	ENST00000485365	VMAC	Q2NL98	169 aa		7.21	□□□□□ -1.26
SFPQ-208	ENST00000485365	ZDHHC14	Q8IZN3	488 aa		7.21	□□□□□ -1.26
SFPQ-208	ENST00000485365	SYT8	Q8NBV8	401 aa		7.21	□□□□□ -1.26
SFPQ-208	ENST00000485365	KREMEN1	Q96MU8	473 aa		7.21	□□□□□ -1.26
SFPQ-208	ENST00000485365	ASPN	Q9BXN1	380 aa		7.21	□□□□□ -1.26
SFPQ-208	ENST00000485365	ARAP3	Q8WWN8	1544 aa		7.21	□□□□□ -1.26
SFPQ-208	ENST00000485365	P4HB	P07237	508 aa	Known RBP	7.2	□□□□□ -1.26
SFPQ-208	ENST00000485365	PDE4C	Q08493	712 aa		7.2	□□□□□ -1.26
SFPQ-208	ENST00000485365	TMEM201	Q5SNT2	666 aa		7.2	□□□□□ -1.26
SFPQ-208	ENST00000485365	ERICH6B	Q5W0A0	696 aa		7.2	□□□□□ -1.26
SFPQ-208	ENST00000485365	SP8	Q8IXZ3	490 aa		7.2	□□□□□ -1.26
SFPQ-208	ENST00000485365	SLFN12	Q8IYM2	578 aa		7.2	□□□□□ -1.26
SFPQ-208	ENST00000485365	CRTAC1	Q9NQ79	661 aa		7.2	□□□□□ -1.26
SFPQ-208	ENST00000485365	SPAG9	O60271	1321 aa	Known RBP	7.2	□□□□□ -1.26
SFPQ-208	ENST00000485365	NRDC	O43847	1150 aa		7.19	□□□□□ -1.26
SFPQ-208	ENST00000485365	LDHB	P07195	334 aa	Known RBP	7.19	□□□□□ -1.26
SFPQ-208	ENST00000485365	CDR1	P51861	262 aa		7.19	□□□□□ -1.26
SFPQ-208	ENST00000485365	YBX1	P67809	324 aa	Known RBP	7.19	□□□□□ -1.26
SFPQ-208	ENST00000485365	TMEFF1	Q8IYR6	380 aa		7.19	□□□□□ -1.26
SFPQ-208	ENST00000485365	JARID2	Q92833	1246 aa	Predicted RBP	7.19	□□□□□ -1.26
SFPQ-208	ENST00000485365	BORCS6	Q96GS4	357 aa		7.19	□□□□□ -1.26
SFPQ-208	ENST00000485365	ADAM7	Q9H2U9	754 aa		7.19	□□□□□ -1.26
SFPQ-208	ENST00000485365	YEATS2	Q9ULM3	1422 aa		7.18	□□□□□ -1.26
SFPQ-208	ENST00000485365	TSPY4	P0CV99	314 aa		7.18	□□□□□ -1.26
SFPQ-208	ENST00000485365	TSPY10	P0CW01	314 aa		7.18	□□□□□ -1.26
SFPQ-208	ENST00000485365	SDHB	P21912	280 aa		7.18	□□□□□ -1.26
SFPQ-208	ENST00000485365	RPL10	P27635	214 aa	Known RBP	7.18	□□□□□ -1.26
SFPQ-208	ENST00000485365	GNA15	P30679	374 aa		7.18	□□□□□ -1.26
SFPQ-208	ENST00000485365	TNNI2	P48788	182 aa		7.18	□□□□□ -1.26
SFPQ-208	ENST00000485365	CLEC16A	Q2KHT3	1053 aa		7.18	□□□□□ -1.26
SFPQ-208	ENST00000485365	RNF111	Q6ZNA4	994 aa		7.18	□□□□□ -1.26
SFPQ-208	ENST00000485365	MAP6	Q96JE9	813 aa		7.18	□□□□□ -1.26
SFPQ-208	ENST00000485365	TEPSIN	Q96N21	525 aa		7.18	□□□□□ -1.26
SFPQ-208	ENST00000485365	TLR6	Q9Y2C9	796 aa		7.18	□□□□□ -1.26
SFPQ-208	ENST00000485365	LRRIQ1	Q96JM4	1722 aa		7.18	□□□□□ -1.26
SFPQ-208	ENST00000485365	TRAPPC8	Q9Y2L5	1435 aa		7.18	□□□□□ -1.26
SFPQ-208	ENST00000485365	GPATCH8	Q9UKJ3	1502 aa	Known RBP	7.17	□□□□□ -1.26
SFPQ-208	ENST00000485365	KIR2DL1	P43626	348 aa	Predicted RBP	7.17	□□□□□ -1.26
SFPQ-208	ENST00000485365	KIR2DL2	P43627	348 aa	Predicted RBP	7.17	□□□□□ -1.26
SFPQ-208	ENST00000485365	FAM50A	Q14320	339 aa	Known RBP	7.17	□□□□□ -1.26
SFPQ-208	ENST00000485365	GGT6	Q6P531	493 aa		7.17	□□□□□ -1.26
SFPQ-208	ENST00000485365	CNKSR3	Q6P9H4	555 aa		7.17	□□□□□ -1.26
SFPQ-208	ENST00000485365	WAPL	Q7Z5K2	1190 aa		7.17	□□□□□ -1.26
SFPQ-208	ENST00000485365	FAM129C	Q86XR2	697 aa		7.17	□□□□□ -1.26
SFPQ-208	ENST00000485365	MZB1	Q8WU39	189 aa		7.17	□□□□□ -1.26
SFPQ-208	ENST00000485365	LUC7L	Q9NQ29	371 aa	Known RBP	7.17	□□□□□ -1.26
SFPQ-208	ENST00000485365	ZMYM5	Q9UJ78	669 aa		7.17	□□□□□ -1.26
SFPQ-208	ENST00000485365	CFAP74	Q9C0B2	1584 aa		7.16	□□□□□ -1.26
SFPQ-208	ENST00000485365	CEBPA	P49715	358 aa	Predicted RBP	7.16	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms