RNA–Protein interactions for RNA: ENST00000484752.5

RFTN1-210, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-210ENST00000484752 V9GY48 417 aaPredicted RBP13.39□□□□□ -0.27
RFTN1-210ENST00000484752 OTOFQ9HC10 1997 aa13.38□□□□□ -0.27
RFTN1-210ENST00000484752 TMEM88BA6NKF7 163 aa13.38□□□□□ -0.27
RFTN1-210ENST00000484752 USP17L15C9J2P7 530 aa13.38□□□□□ -0.27
RFTN1-210ENST00000484752 USP17L13C9JLJ4 530 aa13.38□□□□□ -0.27
RFTN1-210ENST00000484752 USP17L11C9JVI0 530 aa13.38□□□□□ -0.27
RFTN1-210ENST00000484752 USP17L18D6R9N7 530 aa13.38□□□□□ -0.27
RFTN1-210ENST00000484752 USP17L22D6RA61 530 aa13.38□□□□□ -0.27
RFTN1-210ENST00000484752 USP17L17D6RBQ6 530 aa13.38□□□□□ -0.27
RFTN1-210ENST00000484752 USP17L19D6RCP7 530 aa13.38□□□□□ -0.27
RFTN1-210ENST00000484752 USP17L20D6RJB6 530 aa13.38□□□□□ -0.27
RFTN1-210ENST00000484752 IRF6O14896 467 aa13.38□□□□□ -0.27
RFTN1-210ENST00000484752 ZBTB5O15062 677 aa13.38□□□□□ -0.27
RFTN1-210ENST00000484752 STX6O43752 255 aa13.38□□□□□ -0.27
RFTN1-210ENST00000484752 FLOT1O75955 427 aa13.38□□□□□ -0.27
RFTN1-210ENST00000484752 CETPP11597 493 aa13.38□□□□□ -0.27
RFTN1-210ENST00000484752 SCG2P13521 617 aa13.38□□□□□ -0.27
RFTN1-210ENST00000484752 FMR1Q06787 632 aaKnown RBP eCLIP13.38□□□□□ -0.27
RFTN1-210ENST00000484752 USP17L24Q0WX57 530 aa13.38□□□□□ -0.27
RFTN1-210ENST00000484752 GNL2Q13823 731 aaKnown RBP13.38□□□□□ -0.27
RFTN1-210ENST00000484752 PFKFB3Q16875 520 aaPredicted RBP13.38□□□□□ -0.27
RFTN1-210ENST00000484752 BTNL9Q6UXG8 535 aa13.38□□□□□ -0.27
RFTN1-210ENST00000484752 HOMER1Q86YM7 354 aa13.38□□□□□ -0.27
RFTN1-210ENST00000484752 ADGRF4Q8IZF3 695 aa13.38□□□□□ -0.27
RFTN1-210ENST00000484752 CMTR1Q8N1G2 835 aaKnown RBP13.38□□□□□ -0.27
RFTN1-210ENST00000484752 PRPF38AQ8NAV1 312 aaKnown RBP13.38□□□□□ -0.27
RFTN1-210ENST00000484752 NUP88Q99567 741 aaPredicted RBP13.38□□□□□ -0.27
RFTN1-210ENST00000484752 SLF1Q9BQI6 1058 aa13.38□□□□□ -0.27
RFTN1-210ENST00000484752 UBA5Q9GZZ9 404 aa13.38□□□□□ -0.27
RFTN1-210ENST00000484752 RPAP3Q9H6T3 665 aaPredicted RBP13.38□□□□□ -0.27
RFTN1-210ENST00000484752 VAT1LQ9HCJ6 419 aa13.38□□□□□ -0.27
RFTN1-210ENST00000484752 EMILIN3Q9NT22 766 aa13.38□□□□□ -0.27
RFTN1-210ENST00000484752 ABT1Q9ULW3 272 aaKnown RBP13.38□□□□□ -0.27
RFTN1-210ENST00000484752 ATP6V1DQ9Y5K8 247 aa13.38□□□□□ -0.27
RFTN1-210ENST00000484752 A0A0G2JLL6 359 aaPredicted RBP13.37□□□□□ -0.27
RFTN1-210ENST00000484752 PNMA6FA0A0J9YX94 578 aa13.37□□□□□ -0.27
RFTN1-210ENST00000484752 VPS37CA5D8V6 355 aaPredicted RBP13.37□□□□□ -0.27
RFTN1-210ENST00000484752 FUT2Q10981 343 aa13.37□□□□□ -0.27
RFTN1-210ENST00000484752 CST9Q5W186 159 aa13.37□□□□□ -0.27
RFTN1-210ENST00000484752 GADL1Q6ZQY3 521 aa13.37□□□□□ -0.27
RFTN1-210ENST00000484752 PRRT2Q7Z6L0 340 aaPredicted RBP13.37□□□□□ -0.27
RFTN1-210ENST00000484752 KIFC2Q96AC6 838 aa13.37□□□□□ -0.27
RFTN1-210ENST00000484752 WNK4Q96J92 1243 aa13.37□□□□□ -0.27
RFTN1-210ENST00000484752 SH3GLB2Q9NR46 395 aa13.37□□□□□ -0.27
RFTN1-210ENST00000484752 MYPNQ86TC9 1320 aa13.37□□□□□ -0.27
RFTN1-210ENST00000484752 ZBED4O75132 1171 aa13.36□□□□□ -0.27
RFTN1-210ENST00000484752 PPFIA3O75145 1194 aa13.36□□□□□ -0.27
RFTN1-210ENST00000484752 FDPSP14324 419 aaKnown RBP13.36□□□□□ -0.27
RFTN1-210ENST00000484752 SYT1P21579 422 aa13.36□□□□□ -0.27
RFTN1-210ENST00000484752 OSBPP22059 807 aa13.36□□□□□ -0.27
RFTN1-210ENST00000484752 CALML3P27482 149 aa13.36□□□□□ -0.27
RFTN1-210ENST00000484752 SLC16A2P36021 539 aa13.36□□□□□ -0.27
RFTN1-210ENST00000484752 ZNF157P51786 506 aaPredicted RBP13.36□□□□□ -0.27
RFTN1-210ENST00000484752 IRX3P78415 501 aaPredicted RBP13.36□□□□□ -0.27
RFTN1-210ENST00000484752 CDC37Q16543 378 aaPredicted RBP13.36□□□□□ -0.27
RFTN1-210ENST00000484752 TTBK2Q6IQ55 1244 aa13.36□□□□□ -0.27
RFTN1-210ENST00000484752 RGMBQ6NW40 437 aa13.36□□□□□ -0.27
RFTN1-210ENST00000484752 PPP1R18Q6NYC8 613 aa13.36□□□□□ -0.27
RFTN1-210ENST00000484752 RASGRP2Q7LDG7 609 aa13.36□□□□□ -0.27
RFTN1-210ENST00000484752 HEATR3Q7Z4Q2 680 aa13.36□□□□□ -0.27
RFTN1-210ENST00000484752 SAPCD2Q86UD0 394 aa13.36□□□□□ -0.27
RFTN1-210ENST00000484752 PIBF1Q8WXW3 757 aa13.36□□□□□ -0.27
RFTN1-210ENST00000484752 CCDC102AQ96A19 550 aa13.36□□□□□ -0.27
RFTN1-210ENST00000484752 PIGSQ96S52 555 aa13.36□□□□□ -0.27
RFTN1-210ENST00000484752 GLT8D2Q9H1C3 349 aa13.36□□□□□ -0.27
RFTN1-210ENST00000484752 JMJD4Q9H9V9 463 aa13.36□□□□□ -0.27
RFTN1-210ENST00000484752 HOXC10Q9NYD6 342 aa13.36□□□□□ -0.27
RFTN1-210ENST00000484752 PNMA3Q9UL41 463 aa13.36□□□□□ -0.27
RFTN1-210ENST00000484752 PRR12Q9ULL5 1215 aa13.36□□□□□ -0.27
RFTN1-210ENST00000484752 TLL2Q9Y6L7 1015 aa13.36□□□□□ -0.27
RFTN1-210ENST00000484752 TRPM7Q96QT4 1865 aa13.36□□□□□ -0.27
RFTN1-210ENST00000484752 CYTH3O43739 400 aa13.35□□□□□ -0.27
RFTN1-210ENST00000484752 GNA11P29992 359 aa13.35□□□□□ -0.27
RFTN1-210ENST00000484752 COG2Q14746 738 aa13.35□□□□□ -0.27
RFTN1-210ENST00000484752 SPRYD7Q5W111 196 aa13.35□□□□□ -0.27
RFTN1-210ENST00000484752 GALNT17Q6IS24 598 aa13.35□□□□□ -0.27
RFTN1-210ENST00000484752 SAMD1Q6SPF0 538 aaPredicted RBP13.35□□□□□ -0.27
RFTN1-210ENST00000484752 FBXO18Q8NFZ0 1043 aa13.35□□□□□ -0.27
RFTN1-210ENST00000484752 BICD2Q8TD16 824 aa13.35□□□□□ -0.27
RFTN1-210ENST00000484752 GTF3C2Q8WUA4 911 aaPredicted RBP13.35□□□□□ -0.27
RFTN1-210ENST00000484752 CNKSR2Q8WXI2 1034 aa13.35□□□□□ -0.27
RFTN1-210ENST00000484752 HHIPL1Q96JK4 782 aa13.35□□□□□ -0.27
RFTN1-210ENST00000484752 AMNQ9BXJ7 453 aa13.35□□□□□ -0.27
RFTN1-210ENST00000484752 PPP1R9AQ9ULJ8 1098 aa13.35□□□□□ -0.27
RFTN1-210ENST00000484752 AGTPBP1Q9UPW5 1226 aa13.35□□□□□ -0.27
RFTN1-210ENST00000484752 HOXA7P31268 230 aaPredicted RBP13.34□□□□□ -0.27
RFTN1-210ENST00000484752 DDIT3P35638 169 aa13.34□□□□□ -0.27
RFTN1-210ENST00000484752 NAPAP54920 295 aa13.34□□□□□ -0.27
RFTN1-210ENST00000484752 NLRP5P59047 1200 aa13.34□□□□□ -0.27
RFTN1-210ENST00000484752 KIAA1755Q5JYT7 1200 aa13.34□□□□□ -0.27
RFTN1-210ENST00000484752 KRT40Q6A162 431 aa13.34□□□□□ -0.27
RFTN1-210ENST00000484752 CATSPERGQ6ZRH7 1159 aa13.34□□□□□ -0.27
RFTN1-210ENST00000484752 FBXO11Q86XK2 927 aa13.34□□□□□ -0.27
RFTN1-210ENST00000484752 TEX2Q8IWB9 1127 aa13.34□□□□□ -0.27
RFTN1-210ENST00000484752 MB21D1Q8N884 522 aa13.34□□□□□ -0.27
RFTN1-210ENST00000484752 ZSCAN16Q9H4T2 348 aaPredicted RBP13.34□□□□□ -0.27
RFTN1-210ENST00000484752 C6orf50Q9HD87 102 aa13.34□□□□□ -0.27
RFTN1-210ENST00000484752 BARHL2Q9NY43 387 aa13.34□□□□□ -0.27
RFTN1-210ENST00000484752 SLC45A1Q9Y2W3 748 aa13.34□□□□□ -0.27
RFTN1-210ENST00000484752 CCL15-CCL14A0A0B4J2E2 113 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms