RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 RAB11FIP4Q86YS3 637 aa16.17■□□□□ 0.18
SMAD9-204ENST00000483941 CDAN1Q8IWY9 1227 aa16.17■□□□□ 0.18
SMAD9-204ENST00000483941 LRRC47Q8N1G4 583 aaKnown RBP16.17■□□□□ 0.18
SMAD9-204ENST00000483941 GMCL1Q96IK5 515 aa16.17■□□□□ 0.18
SMAD9-204ENST00000483941 ZNF333Q96JL9 665 aa16.17■□□□□ 0.18
SMAD9-204ENST00000483941 SLC26A6Q9BXS9 759 aa16.17■□□□□ 0.18
SMAD9-204ENST00000483941 TMX2Q9Y320 296 aa16.17■□□□□ 0.18
SMAD9-204ENST00000483941 CSADQ9Y600 493 aa16.17■□□□□ 0.18
SMAD9-204ENST00000483941 SIPA1L1O43166 1804 aa16.17■□□□□ 0.18
SMAD9-204ENST00000483941 KLRF2D3W0D1 207 aa16.16■□□□□ 0.18
SMAD9-204ENST00000483941 F5H6K3 240 aa16.16■□□□□ 0.18
SMAD9-204ENST00000483941 KLRC3Q07444 240 aa16.16■□□□□ 0.18
SMAD9-204ENST00000483941 LPAR1Q92633 364 aa16.16■□□□□ 0.18
SMAD9-204ENST00000483941 C8orf76Q96K31 380 aa16.16■□□□□ 0.18
SMAD9-204ENST00000483941 SPZ1Q9BXG8 430 aa16.16■□□□□ 0.18
SMAD9-204ENST00000483941 MAD2L2Q9UI95 211 aa16.16■□□□□ 0.18
SMAD9-204ENST00000483941 ZSWIM8A7E2V4 1837 aa16.15■□□□□ 0.18
SMAD9-204ENST00000483941 BRD1O95696 1058 aa16.15■□□□□ 0.18
SMAD9-204ENST00000483941 GJA5P36382 358 aa16.15■□□□□ 0.18
SMAD9-204ENST00000483941 CAP1Q01518 475 aa16.15■□□□□ 0.18
SMAD9-204ENST00000483941 ZNF543Q08ER8 600 aa16.15■□□□□ 0.18
SMAD9-204ENST00000483941 TRAF1Q13077 416 aa16.15■□□□□ 0.18
SMAD9-204ENST00000483941 RRP1BQ14684 758 aaKnown RBP16.15■□□□□ 0.18
SMAD9-204ENST00000483941 SAFBQ15424 915 aaKnown RBP eCLIP16.15■□□□□ 0.18
SMAD9-204ENST00000483941 CCDC96Q2M329 555 aa16.15■□□□□ 0.18
SMAD9-204ENST00000483941 SLC9C1Q4G0N8 1177 aa16.15■□□□□ 0.18
SMAD9-204ENST00000483941 GBP4Q96PP9 640 aa16.15■□□□□ 0.18
SMAD9-204ENST00000483941 FEZ1Q99689 392 aa16.15■□□□□ 0.18
SMAD9-204ENST00000483941 ALG1Q9BT22 464 aa16.15■□□□□ 0.18
SMAD9-204ENST00000483941 WDR18Q9BV38 432 aa16.15■□□□□ 0.18
SMAD9-204ENST00000483941 SEC63Q9UGP8 760 aaKnown RBP16.15■□□□□ 0.18
SMAD9-204ENST00000483941 GREB1LQ9C091 1923 aaPredicted RBP16.14■□□□□ 0.17
SMAD9-204ENST00000483941 C19orf81C9J6K1 198 aa16.14■□□□□ 0.17
SMAD9-204ENST00000483941 hCG_1984214I3L0E3 225 aa16.14■□□□□ 0.17
SMAD9-204ENST00000483941 RAD21O60216 631 aa16.14■□□□□ 0.17
SMAD9-204ENST00000483941 USP2O75604 605 aaPredicted RBP16.14■□□□□ 0.17
SMAD9-204ENST00000483941 SLURP2P0DP57 97 aa16.14■□□□□ 0.17
SMAD9-204ENST00000483941 ZSCAN22P10073 491 aaPredicted RBP16.14■□□□□ 0.17
SMAD9-204ENST00000483941 NBPF11Q86T75 865 aa16.14■□□□□ 0.17
SMAD9-204ENST00000483941 SIAH1Q8IUQ4 282 aa16.14■□□□□ 0.17
SMAD9-204ENST00000483941 ANKRD13AQ8IZ07 590 aa16.14■□□□□ 0.17
SMAD9-204ENST00000483941 ZNF713Q8N859 430 aaPredicted RBP16.14■□□□□ 0.17
SMAD9-204ENST00000483941 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.14■□□□□ 0.17
SMAD9-204ENST00000483941 CCDC12Q8WUD4 166 aaPredicted RBP16.14■□□□□ 0.17
SMAD9-204ENST00000483941 PHKBQ93100 1093 aa16.14■□□□□ 0.17
SMAD9-204ENST00000483941 RRP36Q96EU6 259 aaKnown RBP16.14■□□□□ 0.17
SMAD9-204ENST00000483941 ZSCAN16Q9H4T2 348 aaPredicted RBP16.14■□□□□ 0.17
SMAD9-204ENST00000483941 VCPKMTQ9H867 229 aa16.14■□□□□ 0.17
SMAD9-204ENST00000483941 MTMR7Q9Y216 660 aa16.14■□□□□ 0.17
SMAD9-204ENST00000483941 V9GY48 417 aaPredicted RBP16.14■□□□□ 0.17
SMAD9-204ENST00000483941 COL6A3P12111 3177 aa16.14■□□□□ 0.17
SMAD9-204ENST00000483941 VPS37CA5D8V6 355 aaPredicted RBP16.13■□□□□ 0.17
SMAD9-204ENST00000483941 USP17L10C9JJH3 530 aa16.13■□□□□ 0.17
SMAD9-204ENST00000483941 BMP3P12645 472 aa16.13■□□□□ 0.17
SMAD9-204ENST00000483941 FDPSP14324 419 aaKnown RBP16.13■□□□□ 0.17
SMAD9-204ENST00000483941 USP17L2Q6R6M4 530 aa16.13■□□□□ 0.17
SMAD9-204ENST00000483941 CCDC82Q8N4S0 544 aa16.13■□□□□ 0.17
SMAD9-204ENST00000483941 SRBD1Q8N5C6 995 aaKnown RBP16.13■□□□□ 0.17
SMAD9-204ENST00000483941 ZNF280CQ8ND82 737 aa16.13■□□□□ 0.17
SMAD9-204ENST00000483941 FBXO18Q8NFZ0 1043 aa16.13■□□□□ 0.17
SMAD9-204ENST00000483941 CHURC1Q8WUH1 139 aa16.13■□□□□ 0.17
SMAD9-204ENST00000483941 PTPN18Q99952 460 aa16.13■□□□□ 0.17
SMAD9-204ENST00000483941 KIAA1683Q9H0B3 1180 aa16.13■□□□□ 0.17
SMAD9-204ENST00000483941 SH3GLB2Q9NR46 395 aa16.13■□□□□ 0.17
SMAD9-204ENST00000483941 ISY1Q9ULR0 285 aaKnown RBP16.13■□□□□ 0.17
SMAD9-204ENST00000483941 PTCH2Q9Y6C5 1203 aa16.13■□□□□ 0.17
SMAD9-204ENST00000483941 TESPA1A2RU30 521 aaPredicted RBP16.12■□□□□ 0.17
SMAD9-204ENST00000483941 PLA2G6O60733 806 aa16.12■□□□□ 0.17
SMAD9-204ENST00000483941 PLEKHA8P1O95397 391 aa16.12■□□□□ 0.17
SMAD9-204ENST00000483941 NDUFB10O96000 172 aa16.12■□□□□ 0.17
SMAD9-204ENST00000483941 PTPRAP18433 802 aa16.12■□□□□ 0.17
SMAD9-204ENST00000483941 INPP5BP32019 993 aa16.12■□□□□ 0.17
SMAD9-204ENST00000483941 JAG1P78504 1218 aa16.12■□□□□ 0.17
SMAD9-204ENST00000483941 FUT2Q10981 343 aa16.12■□□□□ 0.17
SMAD9-204ENST00000483941 PFKFB3Q16875 520 aaPredicted RBP16.12■□□□□ 0.17
SMAD9-204ENST00000483941 FAM160B2Q86V87 743 aa16.12■□□□□ 0.17
SMAD9-204ENST00000483941 RIOX1Q9H6W3 641 aa16.12■□□□□ 0.17
SMAD9-204ENST00000483941 BRMS1Q9HCU9 246 aa16.12■□□□□ 0.17
SMAD9-204ENST00000483941 MTMR6Q9Y217 621 aa16.12■□□□□ 0.17
SMAD9-204ENST00000483941 A0A0C4DFX4 3053 aa16.12■□□□□ 0.17
SMAD9-204ENST00000483941 H0YGN5 161 aa16.11■□□□□ 0.17
SMAD9-204ENST00000483941 GOLGA6L22H0YM25 854 aa16.11■□□□□ 0.17
SMAD9-204ENST00000483941 SCG2P13521 617 aa16.11■□□□□ 0.17
SMAD9-204ENST00000483941 CALML3P27482 149 aa16.11■□□□□ 0.17
SMAD9-204ENST00000483941 ARHGEF6Q15052 776 aa16.11■□□□□ 0.17
SMAD9-204ENST00000483941 GALNT17Q6IS24 598 aa16.11■□□□□ 0.17
SMAD9-204ENST00000483941 CLEC10AQ8IUN9 316 aa16.11■□□□□ 0.17
SMAD9-204ENST00000483941 STAG2Q8N3U4 1231 aa16.11■□□□□ 0.17
SMAD9-204ENST00000483941 CCDC148Q8NFR7 591 aa16.11■□□□□ 0.17
SMAD9-204ENST00000483941 OPTNQ96CV9 577 aa16.11■□□□□ 0.17
SMAD9-204ENST00000483941 FEM1BQ9UK73 627 aa16.11■□□□□ 0.17
SMAD9-204ENST00000483941 PNMA2Q9UL42 364 aa16.11■□□□□ 0.17
SMAD9-204ENST00000483941 CNTNAP5Q8WYK1 1306 aa16.11■□□□□ 0.17
SMAD9-204ENST00000483941 A0A1W2PRG0 241 aa16.1■□□□□ 0.17
SMAD9-204ENST00000483941 WDR46O15213 610 aaKnown RBP16.1■□□□□ 0.17
SMAD9-204ENST00000483941 F13A1P00488 732 aa16.1■□□□□ 0.17
SMAD9-204ENST00000483941 GOLGA8HP0CJ92 632 aa16.1■□□□□ 0.17
SMAD9-204ENST00000483941 PTMSP20962 102 aa16.1■□□□□ 0.17
SMAD9-204ENST00000483941 STAT2P52630 851 aa16.1■□□□□ 0.17
SMAD9-204ENST00000483941 BACE1P56817 501 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms