RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 MFSD4AQ8N468 514 aa5.87□□□□□ -1.47
PTCD3-214ENST00000483925 MFSD2AQ8NA29 543 aa5.87□□□□□ -1.47
PTCD3-214ENST00000483925 OR6P1Q8NGX9 317 aa5.87□□□□□ -1.47
PTCD3-214ENST00000483925 RHOVQ96L33 236 aa5.87□□□□□ -1.47
PTCD3-214ENST00000483925 UBP1Q9NZI7 540 aa5.87□□□□□ -1.47
PTCD3-214ENST00000483925 COMMD10Q9Y6G5 202 aa5.87□□□□□ -1.47
PTCD3-214ENST00000483925 ROBO2Q9HCK4 1378 aa5.87□□□□□ -1.47
PTCD3-214ENST00000483925 CNTNAP4Q9C0A0 1308 aa5.86□□□□□ -1.47
PTCD3-214ENST00000483925 PRR33A8MZF0 331 aa5.86□□□□□ -1.47
PTCD3-214ENST00000483925 PMLP29590 882 aa5.86□□□□□ -1.47
PTCD3-214ENST00000483925 CAP2P40123 477 aa5.86□□□□□ -1.47
PTCD3-214ENST00000483925 LMNB2Q03252 620 aa5.86□□□□□ -1.47
PTCD3-214ENST00000483925 UBE4AQ14139 1066 aa5.86□□□□□ -1.47
PTCD3-214ENST00000483925 SLBPQ14493 270 aaKnown RBP eCLIP5.86□□□□□ -1.47
PTCD3-214ENST00000483925 SYDE1Q6ZW31 735 aaPredicted RBP5.86□□□□□ -1.47
PTCD3-214ENST00000483925 ANKLE2Q86XL3 938 aa5.86□□□□□ -1.47
PTCD3-214ENST00000483925 CELF2-AS1Q8N7Q2 184 aa5.86□□□□□ -1.47
PTCD3-214ENST00000483925 JMYQ8N9B5 988 aa5.86□□□□□ -1.47
PTCD3-214ENST00000483925 PHC3Q8NDX5 983 aa5.86□□□□□ -1.47
PTCD3-214ENST00000483925 ZSCAN18Q8TBC5 510 aaPredicted RBP5.86□□□□□ -1.47
PTCD3-214ENST00000483925 CHAC2Q8WUX2 184 aa5.86□□□□□ -1.47
PTCD3-214ENST00000483925 CCDC120Q96HB5 630 aa5.86□□□□□ -1.47
PTCD3-214ENST00000483925 MIPEPQ99797 713 aa5.86□□□□□ -1.47
PTCD3-214ENST00000483925 WNT10AQ9GZT5 417 aa5.86□□□□□ -1.47
PTCD3-214ENST00000483925 FBRSQ9HAH7 460 aa5.86□□□□□ -1.47
PTCD3-214ENST00000483925 ST7Q9NRC1 585 aa5.86□□□□□ -1.47
PTCD3-214ENST00000483925 F6X3S4 739 aa5.85□□□□□ -1.47
PTCD3-214ENST00000483925 H3BS24 57 aa5.85□□□□□ -1.47
PTCD3-214ENST00000483925 PF4P02776 101 aa5.85□□□□□ -1.47
PTCD3-214ENST00000483925 CELA3AP09093 270 aa5.85□□□□□ -1.47
PTCD3-214ENST00000483925 CFPP27918 469 aa5.85□□□□□ -1.47
PTCD3-214ENST00000483925 GIPRP48546 466 aa5.85□□□□□ -1.47
PTCD3-214ENST00000483925 EPHB1P54762 984 aa5.85□□□□□ -1.47
PTCD3-214ENST00000483925 ETF1P62495 437 aaKnown RBP5.85□□□□□ -1.47
PTCD3-214ENST00000483925 FAM160A1Q05DH4 1040 aa5.85□□□□□ -1.47
PTCD3-214ENST00000483925 PTPN11Q06124 597 aaPredicted RBP5.85□□□□□ -1.47
PTCD3-214ENST00000483925 TKFCQ3LXA3 575 aa5.85□□□□□ -1.47
PTCD3-214ENST00000483925 DALRD3Q5D0E6 543 aaKnown RBP5.85□□□□□ -1.47
PTCD3-214ENST00000483925 DIEXFQ68CQ4 756 aaKnown RBP5.85□□□□□ -1.47
PTCD3-214ENST00000483925 THAP5Q7Z6K1 395 aa5.85□□□□□ -1.47
PTCD3-214ENST00000483925 GOLM1Q8NBJ4 401 aa5.85□□□□□ -1.47
PTCD3-214ENST00000483925 PLPPR2Q96GM1 343 aa5.85□□□□□ -1.47
PTCD3-214ENST00000483925 C19orf73Q9NVV2 129 aa5.85□□□□□ -1.47
PTCD3-214ENST00000483925 THRAP3Q9Y2W1 955 aaKnown RBP5.85□□□□□ -1.47
PTCD3-214ENST00000483925 ST14Q9Y5Y6 855 aa5.85□□□□□ -1.47
PTCD3-214ENST00000483925 SNCAIPQ9Y6H5 919 aa5.85□□□□□ -1.47
PTCD3-214ENST00000483925 CAPN6Q9Y6Q1 641 aa5.85□□□□□ -1.47
PTCD3-214ENST00000483925 SH3BP5O60239 455 aa5.84□□□□□ -1.47
PTCD3-214ENST00000483925 ASMTLO95671 621 aa5.84□□□□□ -1.47
PTCD3-214ENST00000483925 GARTP22102 1010 aa5.84□□□□□ -1.47
PTCD3-214ENST00000483925 LIG3P49916 1009 aa5.84□□□□□ -1.47
PTCD3-214ENST00000483925 CAMK2GQ13555 558 aaPredicted RBP5.84□□□□□ -1.47
PTCD3-214ENST00000483925 HLTFQ14527 1009 aaKnown RBP eCLIP5.84□□□□□ -1.47
PTCD3-214ENST00000483925 MAP3K11Q16584 847 aa5.84□□□□□ -1.47
PTCD3-214ENST00000483925 NKG7Q16617 165 aa5.84□□□□□ -1.47
PTCD3-214ENST00000483925 C4orf46Q504U0 113 aa5.84□□□□□ -1.47
PTCD3-214ENST00000483925 BRDTQ58F21 947 aaPredicted RBP5.84□□□□□ -1.47
PTCD3-214ENST00000483925 LETMD1Q6P1Q0 360 aa5.84□□□□□ -1.47
PTCD3-214ENST00000483925 HID1Q8IV36 788 aa5.84□□□□□ -1.47
PTCD3-214ENST00000483925 WDR75Q8IWA0 830 aaKnown RBP5.84□□□□□ -1.47
PTCD3-214ENST00000483925 RIN3Q8TB24 985 aa5.84□□□□□ -1.47
PTCD3-214ENST00000483925 FERD3LQ96RJ6 166 aa5.84□□□□□ -1.47
PTCD3-214ENST00000483925 APBA2Q99767 749 aa5.84□□□□□ -1.47
PTCD3-214ENST00000483925 MCM8Q9UJA3 840 aa5.84□□□□□ -1.47
PTCD3-214ENST00000483925 KDM2BQ8NHM5 1336 aa5.83□□□□□ -1.48
PTCD3-214ENST00000483925 NFIBO00712 420 aa5.83□□□□□ -1.48
PTCD3-214ENST00000483925 CBX7O95931 251 aa5.83□□□□□ -1.48
PTCD3-214ENST00000483925 KRT18P05783 430 aaKnown RBP5.83□□□□□ -1.48
PTCD3-214ENST00000483925 IMPDH2P12268 514 aa5.83□□□□□ -1.48
PTCD3-214ENST00000483925 CYP7A1P22680 504 aa5.83□□□□□ -1.48
PTCD3-214ENST00000483925 SOX5P35711 763 aa5.83□□□□□ -1.48
PTCD3-214ENST00000483925 GNALP38405 381 aa5.83□□□□□ -1.48
PTCD3-214ENST00000483925 ZNF165P49910 485 aa5.83□□□□□ -1.48
PTCD3-214ENST00000483925 CT47A1Q5JQC4 288 aaPredicted RBP5.83□□□□□ -1.48
PTCD3-214ENST00000483925 CCDC81Q6ZN84 652 aa5.83□□□□□ -1.48
PTCD3-214ENST00000483925 FAM196AQ6ZSG2 479 aa5.83□□□□□ -1.48
PTCD3-214ENST00000483925 SIAH1Q8IUQ4 282 aa5.83□□□□□ -1.48
PTCD3-214ENST00000483925 LRRC56Q8IYG6 542 aaPredicted RBP5.83□□□□□ -1.48
PTCD3-214ENST00000483925 FBXO15Q8NCQ5 510 aaPredicted RBP5.83□□□□□ -1.48
PTCD3-214ENST00000483925 ST13P5Q8NFI4 369 aaPredicted RBP5.83□□□□□ -1.48
PTCD3-214ENST00000483925 UBE2FQ969M7 185 aa5.83□□□□□ -1.48
PTCD3-214ENST00000483925 ZNF669Q96BR6 464 aaPredicted RBP5.83□□□□□ -1.48
PTCD3-214ENST00000483925 MFSD3Q96ES6 412 aa5.83□□□□□ -1.48
PTCD3-214ENST00000483925 COX4I2Q96KJ9 171 aa5.83□□□□□ -1.48
PTCD3-214ENST00000483925 ALPK1Q96QP1 1244 aa5.83□□□□□ -1.48
PTCD3-214ENST00000483925 CAAP1Q9H8G2 361 aa5.83□□□□□ -1.48
PTCD3-214ENST00000483925 PPT2Q9UMR5 302 aa5.83□□□□□ -1.48
PTCD3-214ENST00000483925 KCNQ2O43526 872 aa5.82□□□□□ -1.48
PTCD3-214ENST00000483925 ALDH1L1O75891 902 aa5.82□□□□□ -1.48
PTCD3-214ENST00000483925 CST3P01034 146 aaPredicted RBP5.82□□□□□ -1.48
PTCD3-214ENST00000483925 KIR3DL1P43629 444 aa5.82□□□□□ -1.48
PTCD3-214ENST00000483925 CDKN1CP49918 316 aaPredicted RBP5.82□□□□□ -1.48
PTCD3-214ENST00000483925 EVA1CP58658 441 aa5.82□□□□□ -1.48
PTCD3-214ENST00000483925 SAFB2Q14151 953 aaKnown RBP eCLIP5.82□□□□□ -1.48
PTCD3-214ENST00000483925 NFE2Q16621 373 aaPredicted RBP5.82□□□□□ -1.48
PTCD3-214ENST00000483925 LONRF3Q496Y0 759 aa5.82□□□□□ -1.48
PTCD3-214ENST00000483925 MAP9Q49MG5 647 aa5.82□□□□□ -1.48
PTCD3-214ENST00000483925 SEZ6Q53EL9 994 aa5.82□□□□□ -1.48
PTCD3-214ENST00000483925 WIPI1Q5MNZ9 446 aaPredicted RBP5.82□□□□□ -1.48
PTCD3-214ENST00000483925 FBXW10Q5XX13 1052 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms