RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 PTGDRQ13258 359 aa10.12□□□□□ -0.79
CDC42SE1-204ENST00000483763 IL17AQ16552 155 aa10.12□□□□□ -0.79
CDC42SE1-204ENST00000483763 TATDN1Q6P1N9 297 aa10.12□□□□□ -0.79
CDC42SE1-204ENST00000483763 NIM1KQ8IY84 436 aa10.12□□□□□ -0.79
CDC42SE1-204ENST00000483763 TRIM44Q96DX7 344 aaPredicted RBP10.12□□□□□ -0.79
CDC42SE1-204ENST00000483763 EPSTI1Q96J88 318 aa10.12□□□□□ -0.79
CDC42SE1-204ENST00000483763 RIOX1Q9H6W3 641 aa10.12□□□□□ -0.79
CDC42SE1-204ENST00000483763 SH3GLB2Q9NR46 395 aa10.12□□□□□ -0.79
CDC42SE1-204ENST00000483763 PCDHA6Q9UN73 950 aa10.12□□□□□ -0.79
CDC42SE1-204ENST00000483763 SCAF8Q9UPN6 1271 aaKnown RBP10.12□□□□□ -0.79
CDC42SE1-204ENST00000483763 PCDHA8Q9Y5H6 950 aa10.12□□□□□ -0.79
CDC42SE1-204ENST00000483763 A0A087X0B3 334 aa10.11□□□□□ -0.79
CDC42SE1-204ENST00000483763 TCP10L2B9ZVM9 353 aa10.11□□□□□ -0.79
CDC42SE1-204ENST00000483763 GDF11O95390 407 aa10.11□□□□□ -0.79
CDC42SE1-204ENST00000483763 PNOCQ13519 176 aa10.11□□□□□ -0.79
CDC42SE1-204ENST00000483763 IQCB1Q15051 598 aa10.11□□□□□ -0.79
CDC42SE1-204ENST00000483763 DPCR1Q3MIW9 517 aa10.11□□□□□ -0.79
CDC42SE1-204ENST00000483763 CERKLQ49MI3 558 aaPredicted RBP10.11□□□□□ -0.79
CDC42SE1-204ENST00000483763 TTC38Q5R3I4 469 aa10.11□□□□□ -0.79
CDC42SE1-204ENST00000483763 ISM2Q6H9L7 571 aa10.11□□□□□ -0.79
CDC42SE1-204ENST00000483763 METTL16Q86W50 562 aaKnown RBP10.11□□□□□ -0.79
CDC42SE1-204ENST00000483763 LZTS2Q9BRK4 669 aa10.11□□□□□ -0.79
CDC42SE1-204ENST00000483763 TAOK3Q9H2K8 898 aa10.11□□□□□ -0.79
CDC42SE1-204ENST00000483763 BRMS1Q9HCU9 246 aa10.11□□□□□ -0.79
CDC42SE1-204ENST00000483763 GPCPD1Q9NPB8 672 aa10.11□□□□□ -0.79
CDC42SE1-204ENST00000483763 ZNRF3Q9ULT6 936 aa10.11□□□□□ -0.79
CDC42SE1-204ENST00000483763 POLR2DO15514 142 aaKnown RBP10.11□□□□□ -0.79
CDC42SE1-204ENST00000483763 EEF2P13639 858 aaKnown RBP10.11□□□□□ -0.79
CDC42SE1-204ENST00000483763 MCM7P33993 719 aa10.11□□□□□ -0.79
CDC42SE1-204ENST00000483763 SLC16A2P36021 539 aa10.11□□□□□ -0.79
CDC42SE1-204ENST00000483763 SEPT2Q15019 361 aa10.11□□□□□ -0.79
CDC42SE1-204ENST00000483763 KCTD1Q719H9 257 aa10.11□□□□□ -0.79
CDC42SE1-204ENST00000483763 PDILTQ8N807 584 aa10.11□□□□□ -0.79
CDC42SE1-204ENST00000483763 ZMYND12Q9H0C1 365 aa10.11□□□□□ -0.79
CDC42SE1-204ENST00000483763 PPP1R11O60927 126 aaPredicted RBP10.1□□□□□ -0.79
CDC42SE1-204ENST00000483763 EGFRP00533 1210 aa10.1□□□□□ -0.79
CDC42SE1-204ENST00000483763 CALML3P27482 149 aa10.1□□□□□ -0.79
CDC42SE1-204ENST00000483763 MDM2Q00987 491 aaPredicted RBP10.1□□□□□ -0.79
CDC42SE1-204ENST00000483763 ZNF543Q08ER8 600 aa10.1□□□□□ -0.79
CDC42SE1-204ENST00000483763 STX1AQ16623 288 aa10.1□□□□□ -0.79
CDC42SE1-204ENST00000483763 C4orf32Q8N8J7 132 aa10.1□□□□□ -0.79
CDC42SE1-204ENST00000483763 ZNF579Q8NAF0 562 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-204ENST00000483763 CCDC17Q96LX7 622 aa10.1□□□□□ -0.79
CDC42SE1-204ENST00000483763 TIGD1Q96MW7 591 aa10.1□□□□□ -0.79
CDC42SE1-204ENST00000483763 CSRNP1Q96S65 589 aa10.1□□□□□ -0.79
CDC42SE1-204ENST00000483763 NMRK2Q9NPI5 230 aa10.1□□□□□ -0.79
CDC42SE1-204ENST00000483763 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-204ENST00000483763 ATRNL1Q5VV63 1379 aa10.1□□□□□ -0.79
CDC42SE1-204ENST00000483763 SMARCA1P28370 1054 aa10.1□□□□□ -0.79
CDC42SE1-204ENST00000483763 ATP2C1P98194 919 aaPredicted RBP10.1□□□□□ -0.79
CDC42SE1-204ENST00000483763 KRBA2Q6ZNG9 492 aa10.1□□□□□ -0.79
CDC42SE1-204ENST00000483763 DHX40Q8IX18 779 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-204ENST00000483763 JDP2Q8WYK2 163 aa10.1□□□□□ -0.79
CDC42SE1-204ENST00000483763 COA7Q96BR5 231 aa10.1□□□□□ -0.79
CDC42SE1-204ENST00000483763 RRP36Q96EU6 259 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-204ENST00000483763 VPS33BQ9H267 617 aa10.1□□□□□ -0.79
CDC42SE1-204ENST00000483763 JMJD4Q9H9V9 463 aa10.1□□□□□ -0.79
CDC42SE1-204ENST00000483763 CEP131Q9UPN4 1083 aa10.1□□□□□ -0.79
CDC42SE1-204ENST00000483763 GREB1LQ9C091 1923 aaPredicted RBP10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 SBF1O95248 1867 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 VWA3AA6NCI4 1184 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 SMCO2A6NFE2 343 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 ESPNB1AK53 854 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 ENTPD3O75355 529 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 BMP6P22004 513 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 CDC25AP30304 524 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 NAPAP54920 295 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 DLGAP5Q15398 846 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 INF2Q27J81 1249 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 ASPRV1Q53RT3 343 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 GRAMD1CQ8IYS0 662 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 ADGRF4Q8IZF3 695 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 OGFOD1Q8N543 542 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 DAGLBQ8NCG7 672 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 CNNM3Q8NE01 707 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 ZNF70Q9UC06 446 aaPredicted RBP10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 NOL7Q9UMY1 257 aaKnown RBP10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 MYH8P13535 1937 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 CNTNAP1P78357 1384 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 USP17L10C9JJH3 530 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 RAD21O60216 631 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 GH2P01242 217 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 PRR29P0C7W0 189 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 TRAPPC10P48553 1259 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 NBPF9Q3BBW0 867 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 SYMPKQ92797 1274 aaKnown RBP10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 MKL1Q969V6 931 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 TMEM39BQ9GZU3 492 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 TMEM60Q9H2L4 133 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 KANSL2Q9H9L4 492 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 ANO10Q9NW15 660 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 SERTAD1Q9UHV2 236 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 TUBE1Q9UJT0 475 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 PCDHA5Q9Y5H7 936 aa10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 MORC2Q9Y6X9 1032 aaPredicted RBP10.09□□□□□ -0.79
CDC42SE1-204ENST00000483763 FER1L6Q2WGJ9 1857 aa10.08□□□□□ -0.8
CDC42SE1-204ENST00000483763 A0A1W2PRG0 241 aa10.08□□□□□ -0.8
CDC42SE1-204ENST00000483763 ACTN4O43707 911 aaKnown RBP10.08□□□□□ -0.8
CDC42SE1-204ENST00000483763 EDIL3O43854 480 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms