RNA–Protein interactions for RNA: ENST00000483671.1

RFTN1-209, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 2

Gene RFTN1, Length 1,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-209ENST00000483671 NCLP19338 710 aaKnown RBP18.66■□□□□ 0.58
RFTN1-209ENST00000483671 GNL2Q13823 731 aaKnown RBP18.66■□□□□ 0.58
RFTN1-209ENST00000483671 KIAA1755Q5JYT7 1200 aa18.66■□□□□ 0.58
RFTN1-209ENST00000483671 TYW1BQ6NUM6 668 aa18.66■□□□□ 0.58
RFTN1-209ENST00000483671 GLIS2Q9BZE0 524 aaPredicted RBP18.66■□□□□ 0.58
RFTN1-209ENST00000483671 ZMYND12Q9H0C1 365 aa18.66■□□□□ 0.58
RFTN1-209ENST00000483671 PICK1Q9NRD5 415 aa18.66■□□□□ 0.58
RFTN1-209ENST00000483671 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.66■□□□□ 0.58
RFTN1-209ENST00000483671 RCOR1Q9UKL0 485 aa18.66■□□□□ 0.58
RFTN1-209ENST00000483671 TRAK2O60296 914 aa18.65■□□□□ 0.58
RFTN1-209ENST00000483671 NASPP49321 788 aaPredicted RBP18.65■□□□□ 0.58
RFTN1-209ENST00000483671 USP14P54578 494 aa18.65■□□□□ 0.58
RFTN1-209ENST00000483671 NLRP5P59047 1200 aa18.65■□□□□ 0.58
RFTN1-209ENST00000483671 MAP3K11Q16584 847 aa18.65■□□□□ 0.58
RFTN1-209ENST00000483671 SYDE2Q5VT97 1194 aa18.65■□□□□ 0.58
RFTN1-209ENST00000483671 HEATR3Q7Z4Q2 680 aa18.65■□□□□ 0.58
RFTN1-209ENST00000483671 LEO1Q8WVC0 666 aaPredicted RBP18.65■□□□□ 0.58
RFTN1-209ENST00000483671 PIBF1Q8WXW3 757 aa18.65■□□□□ 0.58
RFTN1-209ENST00000483671 GPKOWQ92917 476 aaPredicted RBP eCLIP18.65■□□□□ 0.58
RFTN1-209ENST00000483671 CDCA5Q96FF9 252 aa18.65■□□□□ 0.58
RFTN1-209ENST00000483671 USP28Q96RU2 1077 aa18.65■□□□□ 0.58
RFTN1-209ENST00000483671 PCDHA4Q9UN74 947 aa18.65■□□□□ 0.58
RFTN1-209ENST00000483671 USP17L10C9JJH3 530 aa18.64■□□□□ 0.57
RFTN1-209ENST00000483671 M0R2N6 131 aa18.64■□□□□ 0.57
RFTN1-209ENST00000483671 WDR46O15213 610 aaKnown RBP18.64■□□□□ 0.57
RFTN1-209ENST00000483671 PPP1R12BO60237 982 aaPredicted RBP18.64■□□□□ 0.57
RFTN1-209ENST00000483671 YEATS4O95619 227 aa18.64■□□□□ 0.57
RFTN1-209ENST00000483671 MBD3O95983 291 aa18.64■□□□□ 0.57
RFTN1-209ENST00000483671 SLC16A2P36021 539 aa18.64■□□□□ 0.57
RFTN1-209ENST00000483671 MAP3K9P80192 1104 aa18.64■□□□□ 0.57
RFTN1-209ENST00000483671 KLHL40Q2TBA0 621 aa18.64■□□□□ 0.57
RFTN1-209ENST00000483671 RILPL1Q5EBL4 403 aa18.64■□□□□ 0.57
RFTN1-209ENST00000483671 FAM160B2Q86V87 743 aa18.64■□□□□ 0.57
RFTN1-209ENST00000483671 HOMER1Q86YM7 354 aa18.64■□□□□ 0.57
RFTN1-209ENST00000483671 OXER1Q8TDS5 423 aa18.64■□□□□ 0.57
RFTN1-209ENST00000483671 ZKSCAN4Q969J2 545 aaPredicted RBP18.64■□□□□ 0.57
RFTN1-209ENST00000483671 SPATA32Q96LK8 384 aa18.64■□□□□ 0.57
RFTN1-209ENST00000483671 NUP88Q99567 741 aaPredicted RBP18.64■□□□□ 0.57
RFTN1-209ENST00000483671 FEZ1Q99689 392 aa18.64■□□□□ 0.57
RFTN1-209ENST00000483671 GDPD2Q9HCC8 539 aa18.64■□□□□ 0.57
RFTN1-209ENST00000483671 VAT1LQ9HCJ6 419 aa18.64■□□□□ 0.57
RFTN1-209ENST00000483671 TFIP11Q9UBB9 837 aaKnown RBP18.64■□□□□ 0.57
RFTN1-209ENST00000483671 MORC2Q9Y6X9 1032 aaPredicted RBP18.64■□□□□ 0.57
RFTN1-209ENST00000483671 TMEM232C9JQI7 657 aa18.63■□□□□ 0.57
RFTN1-209ENST00000483671 RAD21O60216 631 aa18.63■□□□□ 0.57
RFTN1-209ENST00000483671 NF2P35240 595 aa18.63■□□□□ 0.57
RFTN1-209ENST00000483671 STAT2P52630 851 aa18.63■□□□□ 0.57
RFTN1-209ENST00000483671 UBE2HP62256 183 aa18.63■□□□□ 0.57
RFTN1-209ENST00000483671 NR5A1Q13285 461 aa18.63■□□□□ 0.57
RFTN1-209ENST00000483671 TEX2Q8IWB9 1127 aa18.63■□□□□ 0.57
RFTN1-209ENST00000483671 BLIDQ8IZY5 108 aa18.63■□□□□ 0.57
RFTN1-209ENST00000483671 SPICE1Q8N0Z3 855 aa18.63■□□□□ 0.57
RFTN1-209ENST00000483671 ZNF280CQ8ND82 737 aa18.63■□□□□ 0.57
RFTN1-209ENST00000483671 CHURC1Q8WUH1 139 aa18.63■□□□□ 0.57
RFTN1-209ENST00000483671 C12orf42Q96LP6 360 aa18.63■□□□□ 0.57
RFTN1-209ENST00000483671 ANP32EQ9BTT0 268 aa18.63■□□□□ 0.57
RFTN1-209ENST00000483671 FEM1BQ9UK73 627 aa18.63■□□□□ 0.57
RFTN1-209ENST00000483671 PPP1R11O60927 126 aaPredicted RBP18.62■□□□□ 0.57
RFTN1-209ENST00000483671 GNA11P29992 359 aa18.62■□□□□ 0.57
RFTN1-209ENST00000483671 IREB2P48200 963 aaKnown RBP18.62■□□□□ 0.57
RFTN1-209ENST00000483671 TRAPPC10P48553 1259 aa18.62■□□□□ 0.57
RFTN1-209ENST00000483671 NAPAP54920 295 aa18.62■□□□□ 0.57
RFTN1-209ENST00000483671 BACE1P56817 501 aa18.62■□□□□ 0.57
RFTN1-209ENST00000483671 QRICH1Q2TAL8 776 aa18.62■□□□□ 0.57
RFTN1-209ENST00000483671 EAPPQ56P03 285 aaPredicted RBP18.62■□□□□ 0.57
RFTN1-209ENST00000483671 FAM83BQ5T0W9 1011 aa18.62■□□□□ 0.57
RFTN1-209ENST00000483671 ANO1Q5XXA6 986 aa18.62■□□□□ 0.57
RFTN1-209ENST00000483671 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.62■□□□□ 0.57
RFTN1-209ENST00000483671 CCDC84Q86UT8 332 aaPredicted RBP18.62■□□□□ 0.57
RFTN1-209ENST00000483671 C6orf50Q9HD87 102 aa18.62■□□□□ 0.57
RFTN1-209ENST00000483671 SNCAIPQ9Y6H5 919 aa18.62■□□□□ 0.57
RFTN1-209ENST00000483671 PHIPQ8WWQ0 1821 aa18.62■□□□□ 0.57
RFTN1-209ENST00000483671 DCAF8L1A6NGE4 600 aa18.61■□□□□ 0.57
RFTN1-209ENST00000483671 UNCXA6NJT0 531 aa18.61■□□□□ 0.57
RFTN1-209ENST00000483671 C19orf81C9J6K1 198 aa18.61■□□□□ 0.57
RFTN1-209ENST00000483671 TRAF1Q13077 416 aa18.61■□□□□ 0.57
RFTN1-209ENST00000483671 CDC37Q16543 378 aaPredicted RBP18.61■□□□□ 0.57
RFTN1-209ENST00000483671 LINC00301Q8NCQ3 95 aa18.61■□□□□ 0.57
RFTN1-209ENST00000483671 BICD2Q8TD16 824 aa18.61■□□□□ 0.57
RFTN1-209ENST00000483671 KCNG4Q8TDN1 519 aa18.61■□□□□ 0.57
RFTN1-209ENST00000483671 GLT8D2Q9H1C3 349 aa18.61■□□□□ 0.57
RFTN1-209ENST00000483671 PRR12Q9ULL5 1215 aa18.61■□□□□ 0.57
RFTN1-209ENST00000483671 TOB1P50616 345 aaPredicted RBP18.6■□□□□ 0.57
RFTN1-209ENST00000483671 SPP2Q13103 211 aa18.6■□□□□ 0.57
RFTN1-209ENST00000483671 MTMR2Q13614 643 aa18.6■□□□□ 0.57
RFTN1-209ENST00000483671 VGLL4Q14135 290 aa18.6■□□□□ 0.57
RFTN1-209ENST00000483671 GPT2Q8TD30 523 aa18.6■□□□□ 0.57
RFTN1-209ENST00000483671 RANBP17Q9H2T7 1088 aaKnown RBP18.6■□□□□ 0.57
RFTN1-209ENST00000483671 EMILIN3Q9NT22 766 aa18.6■□□□□ 0.57
RFTN1-209ENST00000483671 ISY1Q9ULR0 285 aaKnown RBP18.6■□□□□ 0.57
RFTN1-209ENST00000483671 AFG3L2Q9Y4W6 797 aa18.6■□□□□ 0.57
RFTN1-209ENST00000483671 CSADQ9Y600 493 aa18.6■□□□□ 0.57
RFTN1-209ENST00000483671 DDX49Q9Y6V7 483 aaKnown RBP18.6■□□□□ 0.57
RFTN1-209ENST00000483671 OTOFQ9HC10 1997 aa18.59■□□□□ 0.57
RFTN1-209ENST00000483671 SMCO2A6NFE2 343 aa18.59■□□□□ 0.57
RFTN1-209ENST00000483671 SLC39A14Q15043 492 aa18.59■□□□□ 0.57
RFTN1-209ENST00000483671 PTPAQ15257 358 aa18.59■□□□□ 0.57
RFTN1-209ENST00000483671 SH3D19Q5HYK7 790 aa18.59■□□□□ 0.57
RFTN1-209ENST00000483671 DLK2Q6UY11 383 aa18.59■□□□□ 0.57
RFTN1-209ENST00000483671 RBM46Q8TBY0 533 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms