RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 IKZF1Q13422 519 aa8.64□□□□□ -1.03
PMS1-219ENST00000483293 EEPD1Q7L9B9 569 aa8.64□□□□□ -1.03
PMS1-219ENST00000483293 FIBCD1Q8N539 461 aa8.64□□□□□ -1.03
PMS1-219ENST00000483293 TCTN2Q96GX1 697 aa8.64□□□□□ -1.03
PMS1-219ENST00000483293 SNTG2Q9NY99 539 aa8.64□□□□□ -1.03
PMS1-219ENST00000483293 DUSP13Q9UII6 198 aa8.64□□□□□ -1.03
PMS1-219ENST00000483293 CDK11AQ9UQ88 783 aaPredicted RBP8.64□□□□□ -1.03
PMS1-219ENST00000483293 SNX11Q9Y5W9 270 aa8.64□□□□□ -1.03
PMS1-219ENST00000483293 H0Y8X5 98 aa8.63□□□□□ -1.03
PMS1-219ENST00000483293 CD8BP10966 210 aa8.63□□□□□ -1.03
PMS1-219ENST00000483293 SRFP11831 508 aa8.63□□□□□ -1.03
PMS1-219ENST00000483293 CD97P48960 835 aa8.63□□□□□ -1.03
PMS1-219ENST00000483293 CRTC3Q6UUV7 619 aa8.63□□□□□ -1.03
PMS1-219ENST00000483293 SPATC1Q76KD6 591 aa8.63□□□□□ -1.03
PMS1-219ENST00000483293 TSPYL5Q86VY4 417 aaPredicted RBP8.63□□□□□ -1.03
PMS1-219ENST00000483293 BCL7CQ8WUZ0 217 aaPredicted RBP8.63□□□□□ -1.03
PMS1-219ENST00000483293 ASB11Q8WXH4 323 aa8.63□□□□□ -1.03
PMS1-219ENST00000483293 HDAC8Q9BY41 377 aa8.63□□□□□ -1.03
PMS1-219ENST00000483293 WHRNQ9P202 907 aa8.63□□□□□ -1.03
PMS1-219ENST00000483293 VAV3Q9UKW4 847 aa8.63□□□□□ -1.03
PMS1-219ENST00000483293 AKT3Q9Y243 479 aa8.63□□□□□ -1.03
PMS1-219ENST00000483293 SLC5A6Q9Y289 635 aa8.63□□□□□ -1.03
PMS1-219ENST00000483293 SSU72P8A0A1W2PR75 194 aa8.62□□□□□ -1.03
PMS1-219ENST00000483293 FKTNO75072 461 aa8.62□□□□□ -1.03
PMS1-219ENST00000483293 LTKP29376 864 aa8.62□□□□□ -1.03
PMS1-219ENST00000483293 DPY19L1Q2PZI1 675 aa8.62□□□□□ -1.03
PMS1-219ENST00000483293 FLCNQ8NFG4 579 aa8.62□□□□□ -1.03
PMS1-219ENST00000483293 DNAJC7Q99615 494 aa8.62□□□□□ -1.03
PMS1-219ENST00000483293 PRDM7Q9NQW5 492 aa8.62□□□□□ -1.03
PMS1-219ENST00000483293 CCDC39Q9UFE4 941 aa8.62□□□□□ -1.03
PMS1-219ENST00000483293 MSRB2Q9Y3D2 182 aa8.62□□□□□ -1.03
PMS1-219ENST00000483293 PCDHA11Q9Y5I1 949 aa8.62□□□□□ -1.03
PMS1-219ENST00000483293 ADAMTS4O75173 837 aa8.61□□□□□ -1.03
PMS1-219ENST00000483293 SYPP08247 313 aa8.61□□□□□ -1.03
PMS1-219ENST00000483293 CTSKP43235 329 aa8.61□□□□□ -1.03
PMS1-219ENST00000483293 IFRD2Q12894 506 aaPredicted RBP8.61□□□□□ -1.03
PMS1-219ENST00000483293 RASA3Q14644 834 aa8.61□□□□□ -1.03
PMS1-219ENST00000483293 SLC10A6Q3KNW5 377 aa8.61□□□□□ -1.03
PMS1-219ENST00000483293 MTERF2Q49AM1 385 aa8.61□□□□□ -1.03
PMS1-219ENST00000483293 USHBP1Q8N6Y0 703 aa8.61□□□□□ -1.03
PMS1-219ENST00000483293 SYTL5Q8TDW5 730 aaPredicted RBP8.61□□□□□ -1.03
PMS1-219ENST00000483293 MRFAP1L1Q96HT8 127 aa8.61□□□□□ -1.03
PMS1-219ENST00000483293 FOXP3Q9BZS1 431 aa8.61□□□□□ -1.03
PMS1-219ENST00000483293 CCDC113Q9H0I3 377 aa8.61□□□□□ -1.03
PMS1-219ENST00000483293 CARS2Q9HA77 564 aaKnown RBP8.61□□□□□ -1.03
PMS1-219ENST00000483293 ANGEL1Q9UNK9 670 aaKnown RBP8.61□□□□□ -1.03
PMS1-219ENST00000483293 NOP56O00567 594 aaKnown RBP8.6□□□□□ -1.03
PMS1-219ENST00000483293 KCNH1O95259 989 aa8.6□□□□□ -1.03
PMS1-219ENST00000483293 ESR1P03372 595 aa8.6□□□□□ -1.03
PMS1-219ENST00000483293 ITGAVP06756 1048 aa8.6□□□□□ -1.03
PMS1-219ENST00000483293 NAT2P11245 290 aa8.6□□□□□ -1.03
PMS1-219ENST00000483293 EGR3Q06889 387 aa8.6□□□□□ -1.03
PMS1-219ENST00000483293 CWF19L1Q69YN2 538 aaKnown RBP8.6□□□□□ -1.03
PMS1-219ENST00000483293 ZPBP2Q6X784 338 aa8.6□□□□□ -1.03
PMS1-219ENST00000483293 THAP5Q7Z6K1 395 aa8.6□□□□□ -1.03
PMS1-219ENST00000483293 DTX1Q86Y01 620 aa8.6□□□□□ -1.03
PMS1-219ENST00000483293 ZNF513Q8N8E2 541 aaPredicted RBP8.6□□□□□ -1.03
PMS1-219ENST00000483293 DAGLBQ8NCG7 672 aa8.6□□□□□ -1.03
PMS1-219ENST00000483293 BVESQ8NE79 360 aa8.6□□□□□ -1.03
PMS1-219ENST00000483293 ENOX1Q8TC92 643 aaKnown RBP8.6□□□□□ -1.03
PMS1-219ENST00000483293 CGGBP1Q9UFW8 167 aaPredicted RBP8.6□□□□□ -1.03
PMS1-219ENST00000483293 FHOD1Q9Y613 1164 aa8.6□□□□□ -1.03
PMS1-219ENST00000483293 TBX1O43435 398 aa8.59□□□□□ -1.03
PMS1-219ENST00000483293 DIAPH1O60610 1272 aaKnown RBP8.59□□□□□ -1.03
PMS1-219ENST00000483293 SPINK2P20155 84 aa8.59□□□□□ -1.03
PMS1-219ENST00000483293 ZP2Q05996 745 aa8.59□□□□□ -1.03
PMS1-219ENST00000483293 ZNF655Q8N720 491 aaPredicted RBP8.59□□□□□ -1.03
PMS1-219ENST00000483293 KRTAP4-11Q9BYQ6 195 aa8.59□□□□□ -1.03
PMS1-219ENST00000483293 CWC22Q9HCG8 908 aaKnown RBP8.59□□□□□ -1.03
PMS1-219ENST00000483293 DIS3Q9Y2L1 958 aaKnown RBP8.59□□□□□ -1.03
PMS1-219ENST00000483293 CD3EP07766 207 aa8.58□□□□□ -1.04
PMS1-219ENST00000483293 RPL10P27635 214 aaKnown RBP8.58□□□□□ -1.04
PMS1-219ENST00000483293 RASGRF1Q13972 1273 aa8.58□□□□□ -1.04
PMS1-219ENST00000483293 NFE2L2Q16236 605 aa8.58□□□□□ -1.04
PMS1-219ENST00000483293 GAB4Q2WGN9 574 aa8.58□□□□□ -1.04
PMS1-219ENST00000483293 TP53INP2Q8IXH6 220 aa8.58□□□□□ -1.04
PMS1-219ENST00000483293 MKL1Q969V6 931 aa8.58□□□□□ -1.04
PMS1-219ENST00000483293 MISP3Q96FF7 219 aa8.58□□□□□ -1.04
PMS1-219ENST00000483293 ZMYM5Q9UJ78 669 aa8.58□□□□□ -1.04
PMS1-219ENST00000483293 TCFL5Q9UL49 500 aa8.58□□□□□ -1.04
PMS1-219ENST00000483293 GPR55Q9Y2T6 319 aaPredicted RBP8.58□□□□□ -1.04
PMS1-219ENST00000483293 SF3B6Q9Y3B4 125 aaKnown RBP8.58□□□□□ -1.04
PMS1-219ENST00000483293 KDM2BQ8NHM5 1336 aa8.57□□□□□ -1.04
PMS1-219ENST00000483293 AGRPO00253 132 aa8.57□□□□□ -1.04
PMS1-219ENST00000483293 WNT11O96014 354 aa8.57□□□□□ -1.04
PMS1-219ENST00000483293 GSNP06396 782 aa8.57□□□□□ -1.04
PMS1-219ENST00000483293 GSTM1P09488 218 aa8.57□□□□□ -1.04
PMS1-219ENST00000483293 ZNF143P52747 638 aaPredicted RBP8.57□□□□□ -1.04
PMS1-219ENST00000483293 PCBP3P57721 371 aaKnown RBP8.57□□□□□ -1.04
PMS1-219ENST00000483293 SSRP1Q08945 709 aaKnown RBP8.57□□□□□ -1.04
PMS1-219ENST00000483293 STK11IPQ8N1F8 1099 aa8.57□□□□□ -1.04
PMS1-219ENST00000483293 ARHGEF39Q8N4T4 335 aa8.57□□□□□ -1.04
PMS1-219ENST00000483293 BTN2A2Q8WVV5 523 aa8.57□□□□□ -1.04
PMS1-219ENST00000483293 KRTAP17-1Q9BYP8 105 aa8.57□□□□□ -1.04
PMS1-219ENST00000483293 A0A087WZG4 1122 aa8.56□□□□□ -1.04
PMS1-219ENST00000483293 A0A1W2PQU0 124 aa8.56□□□□□ -1.04
PMS1-219ENST00000483293 VAV1P15498 845 aa8.56□□□□□ -1.04
PMS1-219ENST00000483293 ANGEL2Q5VTE6 544 aaKnown RBP8.56□□□□□ -1.04
PMS1-219ENST00000483293 NFXL1Q6ZNB6 911 aa8.56□□□□□ -1.04
PMS1-219ENST00000483293 TMPRSS7Q7RTY8 843 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms