RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 SLC35F6Q8N357 371 aa13.93□□□□□ -0.18
CCDC78-213ENST00000482878 ZSCAN10Q96SZ4 725 aaPredicted RBP13.93□□□□□ -0.18
CCDC78-213ENST00000482878 CTAGE15A4D2H0 777 aa13.93□□□□□ -0.18
CCDC78-213ENST00000482878 PRPF3O43395 683 aaKnown RBP13.93□□□□□ -0.18
CCDC78-213ENST00000482878 NEBLO76041 1014 aa13.93□□□□□ -0.18
CCDC78-213ENST00000482878 CTAGE8P0CG41 777 aa13.93□□□□□ -0.18
CCDC78-213ENST00000482878 ERVK-24P63145 666 aa13.93□□□□□ -0.18
CCDC78-213ENST00000482878 PTGDRQ13258 359 aa13.93□□□□□ -0.18
CCDC78-213ENST00000482878 KRT31Q15323 416 aa13.93□□□□□ -0.18
CCDC78-213ENST00000482878 CTAGE6Q86UF2 777 aa13.93□□□□□ -0.18
CCDC78-213ENST00000482878 CNGA4Q8IV77 575 aa13.93□□□□□ -0.18
CCDC78-213ENST00000482878 CTAGE4Q8IX94 777 aa13.93□□□□□ -0.18
CCDC78-213ENST00000482878 RIN2Q8WYP3 895 aaPredicted RBP13.93□□□□□ -0.18
CCDC78-213ENST00000482878 TNFRSF25Q93038 417 aa13.93□□□□□ -0.18
CCDC78-213ENST00000482878 SLC24A3Q9HC58 644 aa13.93□□□□□ -0.18
CCDC78-213ENST00000482878 RTL9Q8NET4 1388 aa13.93□□□□□ -0.18
CCDC78-213ENST00000482878 SEMA3EO15041 775 aa13.92□□□□□ -0.18
CCDC78-213ENST00000482878 KIAA0754O94854 1291 aa13.92□□□□□ -0.18
CCDC78-213ENST00000482878 IL6STP40189 918 aaPredicted RBP13.92□□□□□ -0.18
CCDC78-213ENST00000482878 MTRQ99707 1265 aa13.92□□□□□ -0.18
CCDC78-213ENST00000482878 NF2P35240 595 aa13.92□□□□□ -0.18
CCDC78-213ENST00000482878 TTC38Q5R3I4 469 aa13.92□□□□□ -0.18
CCDC78-213ENST00000482878 IFIT1BQ5T764 474 aaKnown RBP13.92□□□□□ -0.18
CCDC78-213ENST00000482878 VPS16Q9H269 839 aa13.92□□□□□ -0.18
CCDC78-213ENST00000482878 ANAPC4Q9UJX5 808 aa13.92□□□□□ -0.18
CCDC78-213ENST00000482878 WTIPA6NIX2 430 aaPredicted RBP13.92□□□□□ -0.18
CCDC78-213ENST00000482878 LRRIQ3A6PVS8 624 aaPredicted RBP13.92□□□□□ -0.18
CCDC78-213ENST00000482878 KCNQ2O43526 872 aa13.92□□□□□ -0.18
CCDC78-213ENST00000482878 FECHP22830 423 aa13.92□□□□□ -0.18
CCDC78-213ENST00000482878 ATP2B2Q01814 1243 aa13.92□□□□□ -0.18
CCDC78-213ENST00000482878 TROAPQ12815 778 aa13.92□□□□□ -0.18
CCDC78-213ENST00000482878 PPP2R5BQ15173 497 aa13.92□□□□□ -0.18
CCDC78-213ENST00000482878 HNRNPLLQ8WVV9 542 aaKnown RBP13.92□□□□□ -0.18
CCDC78-213ENST00000482878 CRACR2AQ9BSW2 395 aa13.92□□□□□ -0.18
CCDC78-213ENST00000482878 SAMM50Q9Y512 469 aa13.92□□□□□ -0.18
CCDC78-213ENST00000482878 BCL9O00512 1426 aa13.92□□□□□ -0.18
CCDC78-213ENST00000482878 MAGEB6P1A0A0J9YX57 407 aa13.91□□□□□ -0.18
CCDC78-213ENST00000482878 CTAGE9A4FU28 777 aa13.91□□□□□ -0.18
CCDC78-213ENST00000482878 N4BP3O15049 544 aa13.91□□□□□ -0.18
CCDC78-213ENST00000482878 RRAGBQ5VZM2 374 aa13.91□□□□□ -0.18
CCDC78-213ENST00000482878 TTC19Q6DKK2 380 aaPredicted RBP13.91□□□□□ -0.18
CCDC78-213ENST00000482878 BCAS4Q8TDM0 211 aa13.91□□□□□ -0.18
CCDC78-213ENST00000482878 ABHD10Q9NUJ1 306 aa13.91□□□□□ -0.18
CCDC78-213ENST00000482878 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.91□□□□□ -0.18
CCDC78-213ENST00000482878 ITIH6Q6UXX5 1313 aa13.91□□□□□ -0.18
CCDC78-213ENST00000482878 ATP2C1P98194 919 aaPredicted RBP13.91□□□□□ -0.18
CCDC78-213ENST00000482878 CHRNDQ07001 517 aa13.91□□□□□ -0.18
CCDC78-213ENST00000482878 CATIPQ7Z7H3 387 aa13.91□□□□□ -0.18
CCDC78-213ENST00000482878 ADAMTS3O15072 1205 aa13.91□□□□□ -0.18
CCDC78-213ENST00000482878 ARHGAP25P42331 645 aa13.91□□□□□ -0.18
CCDC78-213ENST00000482878 DYNLL1P63167 89 aaKnown RBP13.91□□□□□ -0.18
CCDC78-213ENST00000482878 IL17AQ16552 155 aa13.91□□□□□ -0.18
CCDC78-213ENST00000482878 MSANTD4Q8NCY6 345 aa13.91□□□□□ -0.18
CCDC78-213ENST00000482878 CCDC51Q96ER9 411 aa13.91□□□□□ -0.18
CCDC78-213ENST00000482878 RIOK1Q9BRS2 568 aaKnown RBP13.91□□□□□ -0.18
CCDC78-213ENST00000482878 TAB2Q9NYJ8 693 aa13.91□□□□□ -0.18
CCDC78-213ENST00000482878 LIMA1Q9UHB6 759 aaKnown RBP13.91□□□□□ -0.18
CCDC78-213ENST00000482878 RAB21Q9UL25 225 aa13.91□□□□□ -0.18
CCDC78-213ENST00000482878 TTF2Q9UNY4 1162 aaKnown RBP13.91□□□□□ -0.18
CCDC78-213ENST00000482878 MYH3P11055 1940 aa13.91□□□□□ -0.18
CCDC78-213ENST00000482878 DOCK2Q92608 1830 aa13.9□□□□□ -0.18
CCDC78-213ENST00000482878 LRRC10BA6NIK2 292 aa13.9□□□□□ -0.18
CCDC78-213ENST00000482878 BMP15O95972 392 aa13.9□□□□□ -0.18
CCDC78-213ENST00000482878 IGHMBP2P38935 993 aaKnown RBP13.9□□□□□ -0.18
CCDC78-213ENST00000482878 EVX2Q03828 476 aa13.9□□□□□ -0.18
CCDC78-213ENST00000482878 FAM76AQ8TAV0 307 aa13.9□□□□□ -0.18
CCDC78-213ENST00000482878 N4BP2L2Q92802 583 aaPredicted RBP13.9□□□□□ -0.18
CCDC78-213ENST00000482878 BCL9LQ86UU0 1499 aa13.9□□□□□ -0.18
CCDC78-213ENST00000482878 VEGFAP15692 232 aaPredicted RBP13.9□□□□□ -0.18
CCDC78-213ENST00000482878 PDXDC2PQ6P474 469 aa13.9□□□□□ -0.18
CCDC78-213ENST00000482878 POTEDQ86YR6 584 aa13.9□□□□□ -0.18
CCDC78-213ENST00000482878 TMTC1Q8IUR5 882 aa13.9□□□□□ -0.18
CCDC78-213ENST00000482878 MAPK8IP1Q9UQF2 711 aa13.9□□□□□ -0.18
CCDC78-213ENST00000482878 ARAP2Q8WZ64 1704 aa13.9□□□□□ -0.18
CCDC78-213ENST00000482878 CHD4Q14839 1912 aa13.9□□□□□ -0.18
CCDC78-213ENST00000482878 USP5P45974 858 aa13.89□□□□□ -0.19
CCDC78-213ENST00000482878 COPB1P53618 953 aaKnown RBP13.89□□□□□ -0.19
CCDC78-213ENST00000482878 KCNV1Q6PIU1 500 aa13.89□□□□□ -0.19
CCDC78-213ENST00000482878 NUP88Q99567 741 aaPredicted RBP13.89□□□□□ -0.19
CCDC78-213ENST00000482878 GNL3LQ9NVN8 582 aaKnown RBP13.89□□□□□ -0.19
CCDC78-213ENST00000482878 CALRP27797 417 aaKnown RBP13.89□□□□□ -0.19
CCDC78-213ENST00000482878 GYG1P46976 350 aa13.89□□□□□ -0.19
CCDC78-213ENST00000482878 CCDC152Q4G0S7 254 aa13.89□□□□□ -0.19
CCDC78-213ENST00000482878 PIK3AP1Q6ZUJ8 805 aa13.89□□□□□ -0.19
CCDC78-213ENST00000482878 TMTC3Q6ZXV5 915 aa13.89□□□□□ -0.19
CCDC78-213ENST00000482878 SRBD1Q8N5C6 995 aaKnown RBP13.89□□□□□ -0.19
CCDC78-213ENST00000482878 SLF1Q9BQI6 1058 aa13.89□□□□□ -0.19
CCDC78-213ENST00000482878 RWDD2AQ9UIY3 292 aa13.89□□□□□ -0.19
CCDC78-213ENST00000482878 FRMD3A2A2Y4 597 aa13.89□□□□□ -0.19
CCDC78-213ENST00000482878 MCM7P33993 719 aa13.89□□□□□ -0.19
CCDC78-213ENST00000482878 TCP11X2Q5H9J9 407 aa13.89□□□□□ -0.19
CCDC78-213ENST00000482878 OTUD6BQ8N6M0 293 aa13.89□□□□□ -0.19
CCDC78-213ENST00000482878 CABS1Q96KC9 395 aa13.89□□□□□ -0.19
CCDC78-213ENST00000482878 NAPGQ99747 312 aaPredicted RBP13.89□□□□□ -0.19
CCDC78-213ENST00000482878 RBM28Q9NW13 759 aaKnown RBP13.89□□□□□ -0.19
CCDC78-213ENST00000482878 BCORQ6W2J9 1755 aa13.89□□□□□ -0.19
CCDC78-213ENST00000482878 MYO1FO00160 1098 aa13.88□□□□□ -0.19
CCDC78-213ENST00000482878 NMT2O60551 498 aa13.88□□□□□ -0.19
CCDC78-213ENST00000482878 PAK1Q13153 545 aa13.88□□□□□ -0.19
CCDC78-213ENST00000482878 BIRC2Q13490 618 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms