RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 MAMDC4Q6UXC1 1216 aa13.81□□□□□ -0.2
GARNL3-217ENST00000481875 SPDYE1Q8NFV5 336 aaPredicted RBP13.81□□□□□ -0.2
GARNL3-217ENST00000481875 PRKAG2Q9UGJ0 569 aa13.81□□□□□ -0.2
GARNL3-217ENST00000481875 PHF24Q9UPV7 400 aa13.81□□□□□ -0.2
GARNL3-217ENST00000481875 VCANP13611 3396 aa13.8□□□□□ -0.2
GARNL3-217ENST00000481875 DNAJC25-GNG10A0A024R161 153 aa13.8□□□□□ -0.2
GARNL3-217ENST00000481875 IGKV6D-41A0A0C4DH26 115 aa13.8□□□□□ -0.2
GARNL3-217ENST00000481875 GNAT2P19087 354 aa13.8□□□□□ -0.2
GARNL3-217ENST00000481875 KCTD2Q14681 263 aa13.8□□□□□ -0.2
GARNL3-217ENST00000481875 ZNF467Q7Z7K2 595 aaPredicted RBP13.8□□□□□ -0.2
GARNL3-217ENST00000481875 SMC5Q8IY18 1101 aa13.8□□□□□ -0.2
GARNL3-217ENST00000481875 PRPF38AQ8NAV1 312 aaKnown RBP13.8□□□□□ -0.2
GARNL3-217ENST00000481875 APPBP2Q92624 585 aa13.8□□□□□ -0.2
GARNL3-217ENST00000481875 OSBP2Q969R2 916 aa13.8□□□□□ -0.2
GARNL3-217ENST00000481875 MMP19Q99542 508 aa13.8□□□□□ -0.2
GARNL3-217ENST00000481875 TSEN34Q9BSV6 310 aaKnown RBP13.8□□□□□ -0.2
GARNL3-217ENST00000481875 ZNF287Q9HBT7 754 aa13.8□□□□□ -0.2
GARNL3-217ENST00000481875 FBXO28Q9NVF7 368 aa13.8□□□□□ -0.2
GARNL3-217ENST00000481875 RNF113AO15541 343 aaKnown RBP13.79□□□□□ -0.2
GARNL3-217ENST00000481875 SMARCA5O60264 1052 aaPredicted RBP13.79□□□□□ -0.2
GARNL3-217ENST00000481875 ZNF865P0CJ78 1059 aaPredicted RBP13.79□□□□□ -0.2
GARNL3-217ENST00000481875 ATN1P54259 1190 aaPredicted RBP13.79□□□□□ -0.2
GARNL3-217ENST00000481875 PRAMEF19Q5SWL8 479 aa13.79□□□□□ -0.2
GARNL3-217ENST00000481875 Q7L0L9 218 aa13.79□□□□□ -0.2
GARNL3-217ENST00000481875 CENPQQ7L2Z9 268 aaPredicted RBP13.79□□□□□ -0.2
GARNL3-217ENST00000481875 SLF1Q9BQI6 1058 aa13.79□□□□□ -0.2
GARNL3-217ENST00000481875 TEX13BQ9BXU2 312 aa13.79□□□□□ -0.2
GARNL3-217ENST00000481875 SYNGAP1Q96PV0 1343 aa13.79□□□□□ -0.2
GARNL3-217ENST00000481875 F5H6K3 240 aa13.78□□□□□ -0.2
GARNL3-217ENST00000481875 DLL1O00548 723 aa13.78□□□□□ -0.2
GARNL3-217ENST00000481875 FDX1P10109 184 aa13.78□□□□□ -0.2
GARNL3-217ENST00000481875 RARBP10826 455 aa13.78□□□□□ -0.2
GARNL3-217ENST00000481875 ADCYAP1R1P41586 468 aa13.78□□□□□ -0.2
GARNL3-217ENST00000481875 OAZ1P54368 228 aa13.78□□□□□ -0.2
GARNL3-217ENST00000481875 KLRC3Q07444 240 aa13.78□□□□□ -0.2
GARNL3-217ENST00000481875 LRRFIP1Q32MZ4 808 aaKnown RBP13.78□□□□□ -0.2
GARNL3-217ENST00000481875 FAM47AQ5JRC9 791 aa13.78□□□□□ -0.2
GARNL3-217ENST00000481875 FAM83BQ5T0W9 1011 aa13.78□□□□□ -0.2
GARNL3-217ENST00000481875 RNF180Q86T96 592 aa13.78□□□□□ -0.2
GARNL3-217ENST00000481875 GPATCH3Q96I76 525 aa13.78□□□□□ -0.2
GARNL3-217ENST00000481875 TOX2Q96NM4 488 aa13.78□□□□□ -0.2
GARNL3-217ENST00000481875 MKNK2Q9HBH9 465 aa13.78□□□□□ -0.2
GARNL3-217ENST00000481875 PDLIM7Q9NR12 457 aa13.78□□□□□ -0.2
GARNL3-217ENST00000481875 TACC3Q9Y6A5 838 aa13.78□□□□□ -0.2
GARNL3-217ENST00000481875 PLIN4Q96Q06 1357 aa13.78□□□□□ -0.2
GARNL3-217ENST00000481875 MCM3APO60318 1980 aa13.78□□□□□ -0.2
GARNL3-217ENST00000481875 PATL2C9JE40 543 aaKnown RBP13.77□□□□□ -0.21
GARNL3-217ENST00000481875 PGK2P07205 417 aa13.77□□□□□ -0.21
GARNL3-217ENST00000481875 AKR1A1P14550 325 aa13.77□□□□□ -0.21
GARNL3-217ENST00000481875 TTC41PQ6P2S7 1318 aa13.77□□□□□ -0.21
GARNL3-217ENST00000481875 ANKRD33Q7Z3H0 272 aa13.77□□□□□ -0.21
GARNL3-217ENST00000481875 GMCL1P1Q8NEA9 526 aa13.77□□□□□ -0.21
GARNL3-217ENST00000481875 XPNPEP3Q9NQH7 507 aa13.77□□□□□ -0.21
GARNL3-217ENST00000481875 MTMR4Q9NYA4 1195 aa13.77□□□□□ -0.21
GARNL3-217ENST00000481875 ATP11BQ9Y2G3 1177 aa13.77□□□□□ -0.21
GARNL3-217ENST00000481875 TRIM43BA6NCK2 446 aa13.76□□□□□ -0.21
GARNL3-217ENST00000481875 KIAA0355O15063 1070 aa13.76□□□□□ -0.21
GARNL3-217ENST00000481875 GPAA1O43292 621 aa13.76□□□□□ -0.21
GARNL3-217ENST00000481875 ADAMTS4O75173 837 aa13.76□□□□□ -0.21
GARNL3-217ENST00000481875 SNAI1O95863 264 aaPredicted RBP13.76□□□□□ -0.21
GARNL3-217ENST00000481875 NDUFB10O96000 172 aa13.76□□□□□ -0.21
GARNL3-217ENST00000481875 CST5P28325 142 aaPredicted RBP13.76□□□□□ -0.21
GARNL3-217ENST00000481875 NKX3-2P78367 333 aa13.76□□□□□ -0.21
GARNL3-217ENST00000481875 SMAD3P84022 425 aaKnown RBP13.76□□□□□ -0.21
GARNL3-217ENST00000481875 TRIM60Q495X7 471 aa13.76□□□□□ -0.21
GARNL3-217ENST00000481875 ANO1Q5XXA6 986 aa13.76□□□□□ -0.21
GARNL3-217ENST00000481875 CCSAPQ6IQ19 270 aaPredicted RBP13.76□□□□□ -0.21
GARNL3-217ENST00000481875 CHD1LQ86WJ1 897 aa13.76□□□□□ -0.21
GARNL3-217ENST00000481875 KLHDC9Q8NEP7 349 aa13.76□□□□□ -0.21
GARNL3-217ENST00000481875 TRIM43Q96BQ3 446 aaPredicted RBP13.76□□□□□ -0.21
GARNL3-217ENST00000481875 LNPKQ9C0E8 428 aa13.76□□□□□ -0.21
GARNL3-217ENST00000481875 SLC38A10Q9HBR0 1119 aa13.76□□□□□ -0.21
GARNL3-217ENST00000481875 EPB41L4AQ9HCS5 686 aaPredicted RBP13.76□□□□□ -0.21
GARNL3-217ENST00000481875 FBXO40Q9UH90 709 aa13.76□□□□□ -0.21
GARNL3-217ENST00000481875 FEM1BQ9UK73 627 aa13.76□□□□□ -0.21
GARNL3-217ENST00000481875 CNPY2Q9Y2B0 182 aa13.76□□□□□ -0.21
GARNL3-217ENST00000481875 MOXD2PA6NHM9 499 aa13.75□□□□□ -0.21
GARNL3-217ENST00000481875 PLA2G6O60733 806 aa13.75□□□□□ -0.21
GARNL3-217ENST00000481875 DUSP11O75319 330 aaKnown RBP13.75□□□□□ -0.21
GARNL3-217ENST00000481875 TTLL1O95922 423 aa13.75□□□□□ -0.21
GARNL3-217ENST00000481875 TAL1P17542 331 aaPredicted RBP13.75□□□□□ -0.21
GARNL3-217ENST00000481875 NUCB1Q02818 461 aa13.75□□□□□ -0.21
GARNL3-217ENST00000481875 TLE2Q04725 743 aa13.75□□□□□ -0.21
GARNL3-217ENST00000481875 SHHQ15465 462 aa13.75□□□□□ -0.21
GARNL3-217ENST00000481875 TICAM2Q86XR7 235 aa13.75□□□□□ -0.21
GARNL3-217ENST00000481875 IFNL3Q8IZI9 196 aa13.75□□□□□ -0.21
GARNL3-217ENST00000481875 ZNF444Q8N0Y2 327 aaPredicted RBP13.75□□□□□ -0.21
GARNL3-217ENST00000481875 CHST13Q8NET6 341 aa13.75□□□□□ -0.21
GARNL3-217ENST00000481875 NEDD1Q8NHV4 660 aa13.75□□□□□ -0.21
GARNL3-217ENST00000481875 GUCD1Q96NT3 240 aa13.75□□□□□ -0.21
GARNL3-217ENST00000481875 RIPK3Q9Y572 518 aa13.75□□□□□ -0.21
GARNL3-217ENST00000481875 MYO9BQ13459 2157 aa13.74□□□□□ -0.21
GARNL3-217ENST00000481875 A0A1W2PQ45 241 aaPredicted RBP13.74□□□□□ -0.21
GARNL3-217ENST00000481875 A0A1W2PQY0 241 aa13.74□□□□□ -0.21
GARNL3-217ENST00000481875 MINDY4BA8MYZ0 360 aa13.74□□□□□ -0.21
GARNL3-217ENST00000481875 ZBED4O75132 1171 aa13.74□□□□□ -0.21
GARNL3-217ENST00000481875 CLTBP09497 229 aa13.74□□□□□ -0.21
GARNL3-217ENST00000481875 PLCB2Q00722 1185 aa13.74□□□□□ -0.21
GARNL3-217ENST00000481875 PPP4R3BQ5MIZ7 849 aa13.74□□□□□ -0.21
GARNL3-217ENST00000481875 SNRNP48Q6IEG0 339 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms