RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 GRAMD1BQ3KR37 738 aa4.21□□□□□ -1.74
SMC6-208ENST00000481708 C6orf118Q5T5N4 469 aa4.21□□□□□ -1.74
SMC6-208ENST00000481708 NBPF10Q6P3W6 841 aaKnown RBP4.21□□□□□ -1.74
SMC6-208ENST00000481708 MYRIPQ8NFW9 859 aa4.21□□□□□ -1.74
SMC6-208ENST00000481708 PKNOX2Q96KN3 472 aa4.21□□□□□ -1.74
SMC6-208ENST00000481708 NGRNQ9NPE2 291 aaKnown RBP4.21□□□□□ -1.74
SMC6-208ENST00000481708 SCINQ9Y6U3 715 aa4.21□□□□□ -1.74
SMC6-208ENST00000481708 CACNA1SQ13698 1873 aa4.21□□□□□ -1.74
SMC6-208ENST00000481708 SSRP1Q08945 709 aaKnown RBP4.21□□□□□ -1.74
SMC6-208ENST00000481708 SETDB1Q15047 1291 aa4.21□□□□□ -1.74
SMC6-208ENST00000481708 MLC1Q15049 377 aa4.21□□□□□ -1.74
SMC6-208ENST00000481708 NCOA5Q9HCD5 579 aaKnown RBP4.21□□□□□ -1.74
SMC6-208ENST00000481708 SUPT16HQ9Y5B9 1047 aaKnown RBP4.21□□□□□ -1.74
SMC6-208ENST00000481708 NBNO60934 754 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 CYP2E1P05181 493 aaPredicted RBP4.2□□□□□ -1.74
SMC6-208ENST00000481708 LIG3P49916 1009 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 MYBPC2Q14324 1141 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 GNASQ5JWF2 1037 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 AXDND1Q5T1B0 1012 aaPredicted RBP4.2□□□□□ -1.74
SMC6-208ENST00000481708 XKR5Q6UX68 686 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 C1orf131Q8NDD1 294 aaKnown RBP4.2□□□□□ -1.74
SMC6-208ENST00000481708 RHPN1Q8TCX5 695 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 LGR4Q9BXB1 951 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 PPP2R3BQ9Y5P8 575 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 TGFBR3LH3BV60 316 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 ACRP10323 421 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 PPP4R4Q6NUP7 873 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 MRPL14Q6P1L8 145 aaKnown RBP4.2□□□□□ -1.74
SMC6-208ENST00000481708 LVRNQ6Q4G3 990 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 C16orf54Q6UWD8 224 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 CPLX3Q8WVH0 158 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 TRMT2BQ96GJ1 504 aaKnown RBP4.2□□□□□ -1.74
SMC6-208ENST00000481708 CNTNAP3BQ96NU0 1288 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 PAGR1Q9BTK6 254 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 CNTNAP3Q9BZ76 1288 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 DZANK1Q9NVP4 752 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 OBP2AQ9NY56 170 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 ZDHHC3Q9NYG2 299 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 BMP2P12643 396 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 RHOQP17081 205 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 RAPGEF1Q13905 1077 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 SKOR2Q2VWA4 1001 aaPredicted RBP4.2□□□□□ -1.74
SMC6-208ENST00000481708 C1QTNF12Q5T7M4 302 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 TRIM46Q7Z4K8 759 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 UNC5CLQ8IV45 518 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 USP33Q8TEY7 942 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 MTMR8Q96EF0 704 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 MTFR1LQ9H019 292 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 ZNRF3Q9ULT6 936 aa4.2□□□□□ -1.74
SMC6-208ENST00000481708 COL2A1P02458 1487 aaPredicted RBP4.19□□□□□ -1.74
SMC6-208ENST00000481708 A6NNZ2 444 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 INPP5BP32019 993 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 IFRD2Q12894 506 aaPredicted RBP4.19□□□□□ -1.74
SMC6-208ENST00000481708 PCBP1Q15365 356 aaKnown RBP eCLIP4.19□□□□□ -1.74
SMC6-208ENST00000481708 ZNF280DQ6N043 979 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 XRRA1Q6P2D8 792 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 VPS37AQ8NEZ2 397 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 FOCADQ5VW36 1801 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 PRR36Q9H6K5 1346 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 COL6A1P12109 1028 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 ZEB1P37275 1124 aaPredicted RBP4.19□□□□□ -1.74
SMC6-208ENST00000481708 CASP7P55210 303 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 NBPF1Q3BBV0 1214 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 TPTE2Q6XPS3 522 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 MORC1Q86VD1 984 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 LRRTM3Q86VH5 581 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 ZIC5Q96T25 663 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 TRHDEQ9UKU6 1024 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 PDZRN3Q9UPQ7 1066 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 A0A1W2PQH9 124 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 ALG1L2C9J202 215 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 hCG_1984214I3L0E3 225 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 GIPC1O14908 333 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 TRPA1O75762 1119 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 IDH3AP50213 366 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 MORC3Q14149 939 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 ZNF460Q14592 562 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 MAPRE1Q15691 268 aaKnown RBP4.19□□□□□ -1.74
SMC6-208ENST00000481708 TNNI3KQ59H18 835 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 WDR78Q5VTH9 848 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 PKN3Q6P5Z2 889 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 SNX29Q8TEQ0 813 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 SRCIN1Q9C0H9 1055 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 VTA1Q9NP79 307 aa4.19□□□□□ -1.74
SMC6-208ENST00000481708 TRPC5Q9UL62 973 aaPredicted RBP4.19□□□□□ -1.74
SMC6-208ENST00000481708 MAP3K19Q56UN5 1328 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 LTBP3Q9NS15 1303 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 METTL12A8MUP2 240 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 DNAJA2O60884 412 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 AVPP01185 164 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 TRIM27P14373 513 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 ITGAEP38570 1179 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 FCGRTP55899 365 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 FAAP100Q0VG06 881 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 TMEM67Q5HYA8 995 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 PARD3BQ8TEW8 1205 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 TCF12Q99081 682 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 NELL2Q99435 816 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 LRRC3Q9BY71 257 aa4.18□□□□□ -1.74
SMC6-208ENST00000481708 GSX2Q9BZM3 304 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms