RNA–Protein interactions for RNA: ENST00000481296.1

KDM4A-204, Transcript of lysine demethylase 4A, humanhuman

TSL 2

Gene KDM4A, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-204ENST00000481296 USP17L18D6R9N7 530 aa11.13□□□□□ -0.63
KDM4A-204ENST00000481296 USP17L22D6RA61 530 aa11.13□□□□□ -0.63
KDM4A-204ENST00000481296 USP17L17D6RBQ6 530 aa11.13□□□□□ -0.63
KDM4A-204ENST00000481296 USP17L19D6RCP7 530 aa11.13□□□□□ -0.63
KDM4A-204ENST00000481296 USP17L20D6RJB6 530 aa11.13□□□□□ -0.63
KDM4A-204ENST00000481296 IFNAR1P17181 557 aa11.13□□□□□ -0.63
KDM4A-204ENST00000481296 SLC16A2P36021 539 aa11.13□□□□□ -0.63
KDM4A-204ENST00000481296 IRX3P78415 501 aaPredicted RBP11.13□□□□□ -0.63
KDM4A-204ENST00000481296 USP17L24Q0WX57 530 aa11.13□□□□□ -0.63
KDM4A-204ENST00000481296 SREBF2Q12772 1141 aa11.13□□□□□ -0.63
KDM4A-204ENST00000481296 PABPC4Q13310 644 aaKnown RBP eCLIP11.13□□□□□ -0.63
KDM4A-204ENST00000481296 NTRK3Q16288 839 aa11.13□□□□□ -0.63
KDM4A-204ENST00000481296 DEFB115Q30KQ5 88 aa11.13□□□□□ -0.63
KDM4A-204ENST00000481296 SAMD1Q6SPF0 538 aaPredicted RBP11.13□□□□□ -0.63
KDM4A-204ENST00000481296 BTNL9Q6UXG8 535 aa11.13□□□□□ -0.63
KDM4A-204ENST00000481296 TRIM22Q8IYM9 498 aa11.13□□□□□ -0.63
KDM4A-204ENST00000481296 SRBD1Q8N5C6 995 aaKnown RBP11.13□□□□□ -0.63
KDM4A-204ENST00000481296 CHURC1Q8WUH1 139 aa11.13□□□□□ -0.63
KDM4A-204ENST00000481296 BRI3BPQ8WY22 251 aa11.13□□□□□ -0.63
KDM4A-204ENST00000481296 CAPNS2Q96L46 248 aa11.13□□□□□ -0.63
KDM4A-204ENST00000481296 LLPHQ9BRT6 129 aaKnown RBP11.13□□□□□ -0.63
KDM4A-204ENST00000481296 SLC26A6Q9BXS9 759 aa11.13□□□□□ -0.63
KDM4A-204ENST00000481296 RNF26Q9BY78 433 aaPredicted RBP11.13□□□□□ -0.63
KDM4A-204ENST00000481296 UBA5Q9GZZ9 404 aa11.13□□□□□ -0.63
KDM4A-204ENST00000481296 FBXO28Q9NVF7 368 aa11.13□□□□□ -0.63
KDM4A-204ENST00000481296 PNMA3Q9UL41 463 aa11.13□□□□□ -0.63
KDM4A-204ENST00000481296 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.13□□□□□ -0.63
KDM4A-204ENST00000481296 ZSWIM8A7E2V4 1837 aa11.13□□□□□ -0.63
KDM4A-204ENST00000481296 ZNF236Q9UL36 1845 aa11.12□□□□□ -0.63
KDM4A-204ENST00000481296 ZNFX1Q9P2E3 1918 aaKnown RBP11.12□□□□□ -0.63
KDM4A-204ENST00000481296 CYTH3O43739 400 aa11.12□□□□□ -0.63
KDM4A-204ENST00000481296 JAK2O60674 1132 aa11.12□□□□□ -0.63
KDM4A-204ENST00000481296 PLA2G6O60733 806 aa11.12□□□□□ -0.63
KDM4A-204ENST00000481296 FMNL1O95466 1100 aaPredicted RBP11.12□□□□□ -0.63
KDM4A-204ENST00000481296 CTDNEP1O95476 244 aa11.12□□□□□ -0.63
KDM4A-204ENST00000481296 HMGN5P82970 282 aaKnown RBP11.12□□□□□ -0.63
KDM4A-204ENST00000481296 AKAP17AQ02040 695 aaKnown RBP11.12□□□□□ -0.63
KDM4A-204ENST00000481296 NOGQ13253 232 aa11.12□□□□□ -0.63
KDM4A-204ENST00000481296 CDC37Q16543 378 aaPredicted RBP11.12□□□□□ -0.63
KDM4A-204ENST00000481296 GPAT2Q6NUI2 795 aa11.12□□□□□ -0.63
KDM4A-204ENST00000481296 CATSPERGQ6ZRH7 1159 aa11.12□□□□□ -0.63
KDM4A-204ENST00000481296 ANKRD23Q86SG2 305 aa11.12□□□□□ -0.63
KDM4A-204ENST00000481296 NBPF11Q86T75 865 aa11.12□□□□□ -0.63
KDM4A-204ENST00000481296 HOMER1Q86YM7 354 aa11.12□□□□□ -0.63
KDM4A-204ENST00000481296 CCDC82Q8N4S0 544 aa11.12□□□□□ -0.63
KDM4A-204ENST00000481296 PHKBQ93100 1093 aa11.12□□□□□ -0.63
KDM4A-204ENST00000481296 KIFC2Q96AC6 838 aa11.12□□□□□ -0.63
KDM4A-204ENST00000481296 FOXD4L1Q9NU39 408 aa11.12□□□□□ -0.63
KDM4A-204ENST00000481296 RBM27Q9P2N5 1060 aaKnown RBP11.12□□□□□ -0.63
KDM4A-204ENST00000481296 SEC63Q9UGP8 760 aaKnown RBP11.12□□□□□ -0.63
KDM4A-204ENST00000481296 PPP1R9AQ9ULJ8 1098 aa11.12□□□□□ -0.63
KDM4A-204ENST00000481296 PRR12Q9ULL5 1215 aa11.12□□□□□ -0.63
KDM4A-204ENST00000481296 LRRC37A2A6NM11 1700 aa11.12□□□□□ -0.63
KDM4A-204ENST00000481296 TESPA1A2RU30 521 aaPredicted RBP11.11□□□□□ -0.63
KDM4A-204ENST00000481296 SPDYE16A6NNV3 312 aaPredicted RBP11.11□□□□□ -0.63
KDM4A-204ENST00000481296 BTBD19C9JJ37 291 aa11.11□□□□□ -0.63
KDM4A-204ENST00000481296 PDHXO00330 501 aa11.11□□□□□ -0.63
KDM4A-204ENST00000481296 DTNBO60941 627 aa11.11□□□□□ -0.63
KDM4A-204ENST00000481296 PPFIA3O75145 1194 aa11.11□□□□□ -0.63
KDM4A-204ENST00000481296 OSBPP22059 807 aa11.11□□□□□ -0.63
KDM4A-204ENST00000481296 SMARCA1P28370 1054 aa11.11□□□□□ -0.63
KDM4A-204ENST00000481296 HOXA7P31268 230 aaPredicted RBP11.11□□□□□ -0.63
KDM4A-204ENST00000481296 C1QTNF8P60827 252 aa11.11□□□□□ -0.63
KDM4A-204ENST00000481296 HTRA3P83110 453 aa11.11□□□□□ -0.63
KDM4A-204ENST00000481296 SSRP1Q08945 709 aaKnown RBP11.11□□□□□ -0.63
KDM4A-204ENST00000481296 FUT2Q10981 343 aa11.11□□□□□ -0.63
KDM4A-204ENST00000481296 SLC35G1Q2M3R5 365 aa11.11□□□□□ -0.63
KDM4A-204ENST00000481296 ADGRF4Q8IZF3 695 aa11.11□□□□□ -0.63
KDM4A-204ENST00000481296 FAM43AQ8N2R8 423 aa11.11□□□□□ -0.63
KDM4A-204ENST00000481296 SMARCC2Q8TAQ2 1214 aa11.11□□□□□ -0.63
KDM4A-204ENST00000481296 PIBF1Q8WXW3 757 aa11.11□□□□□ -0.63
KDM4A-204ENST00000481296 ATG4CQ96DT6 458 aa11.11□□□□□ -0.63
KDM4A-204ENST00000481296 RRP36Q96EU6 259 aaKnown RBP11.11□□□□□ -0.63
KDM4A-204ENST00000481296 DDX11Q96FC9 970 aa11.11□□□□□ -0.63
KDM4A-204ENST00000481296 INTS4Q96HW7 963 aaKnown RBP11.11□□□□□ -0.63
KDM4A-204ENST00000481296 ASCC2Q9H1I8 757 aaPredicted RBP11.11□□□□□ -0.63
KDM4A-204ENST00000481296 RANBP17Q9H2T7 1088 aaKnown RBP11.11□□□□□ -0.63
KDM4A-204ENST00000481296 RIOX1Q9H6W3 641 aa11.11□□□□□ -0.63
KDM4A-204ENST00000481296 JMJD4Q9H9V9 463 aa11.11□□□□□ -0.63
KDM4A-204ENST00000481296 ORC3Q9UBD5 711 aaPredicted RBP11.11□□□□□ -0.63
KDM4A-204ENST00000481296 DAXXQ9UER7 740 aaPredicted RBP11.11□□□□□ -0.63
KDM4A-204ENST00000481296 SMC3Q9UQE7 1217 aa11.11□□□□□ -0.63
KDM4A-204ENST00000481296 SLC45A1Q9Y2W3 748 aa11.11□□□□□ -0.63
KDM4A-204ENST00000481296 WDR33Q9C0J8 1336 aaKnown RBP11.1□□□□□ -0.63
KDM4A-204ENST00000481296 MYH7BA7E2Y1 1941 aa11.1□□□□□ -0.63
KDM4A-204ENST00000481296 PRPF3O43395 683 aaKnown RBP11.1□□□□□ -0.63
KDM4A-204ENST00000481296 DEXIO95424 95 aa11.1□□□□□ -0.63
KDM4A-204ENST00000481296 HSPA6P17066 643 aa11.1□□□□□ -0.63
KDM4A-204ENST00000481296 DSG3P32926 999 aa11.1□□□□□ -0.63
KDM4A-204ENST00000481296 COG2Q14746 738 aa11.1□□□□□ -0.63
KDM4A-204ENST00000481296 PRPF38AQ8NAV1 312 aaKnown RBP11.1□□□□□ -0.63
KDM4A-204ENST00000481296 FAM184AQ8NB25 1140 aa11.1□□□□□ -0.63
KDM4A-204ENST00000481296 SPRYD3Q8NCJ5 442 aa11.1□□□□□ -0.63
KDM4A-204ENST00000481296 PIGSQ96S52 555 aa11.1□□□□□ -0.63
KDM4A-204ENST00000481296 PARK7Q99497 189 aaKnown RBP11.1□□□□□ -0.63
KDM4A-204ENST00000481296 VAT1LQ9HCJ6 419 aa11.1□□□□□ -0.63
KDM4A-204ENST00000481296 ZCCHC17Q9NP64 241 aaKnown RBP11.1□□□□□ -0.63
KDM4A-204ENST00000481296 KIF3AQ9Y496 699 aa11.1□□□□□ -0.63
KDM4A-204ENST00000481296 CTDP1Q9Y5B0 961 aaPredicted RBP11.1□□□□□ -0.63
KDM4A-204ENST00000481296 hCG_1642624A0A1W2PR95 340 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms