RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	LINC00116	Q8NCU8	138 aa		6.02	□□□□□ -1.45
CCNL1-223	ENST00000481173	KRTAP17-1	Q9BYP8	105 aa		6.02	□□□□□ -1.45
CCNL1-223	ENST00000481173	KLHL14	Q9P2G3	628 aa		6.02	□□□□□ -1.45
CCNL1-223	ENST00000481173	USP31	Q70CQ4	1352 aa		6.02	□□□□□ -1.45
CCNL1-223	ENST00000481173	PRAMEF1	O95521	474 aa		6.01	□□□□□ -1.45
CCNL1-223	ENST00000481173	RAG1	P15918	1043 aa		6.01	□□□□□ -1.45
CCNL1-223	ENST00000481173	POLR2B	P30876	1174 aa	Known RBP	6.01	□□□□□ -1.45
CCNL1-223	ENST00000481173	NCKAP1L	P55160	1127 aa		6.01	□□□□□ -1.45
CCNL1-223	ENST00000481173	ERVFRD-1	P60508	538 aa		6.01	□□□□□ -1.45
CCNL1-223	ENST00000481173	OLFML2B	Q68BL8	750 aa		6.01	□□□□□ -1.45
CCNL1-223	ENST00000481173	LDHD	Q86WU2	507 aa		6.01	□□□□□ -1.45
CCNL1-223	ENST00000481173	SP8	Q8IXZ3	490 aa		6.01	□□□□□ -1.45
CCNL1-223	ENST00000481173	TMEM74	Q96NL1	305 aa		6.01	□□□□□ -1.45
CCNL1-223	ENST00000481173	GPR55	Q9Y2T6	319 aa	Predicted RBP	6.01	□□□□□ -1.45
CCNL1-223	ENST00000481173	NUDT19	A8MXV4	375 aa		6	□□□□□ -1.45
CCNL1-223	ENST00000481173	MPO	P05164	745 aa		6	□□□□□ -1.45
CCNL1-223	ENST00000481173	MPP2	Q14168	576 aa		6	□□□□□ -1.45
CCNL1-223	ENST00000481173	RAB3GAP1	Q15042	981 aa		6	□□□□□ -1.45
CCNL1-223	ENST00000481173	HSF5	Q4G112	596 aa	Predicted RBP	6	□□□□□ -1.45
CCNL1-223	ENST00000481173	NBPF12	Q5TAG4	269 aa	Predicted RBP	6	□□□□□ -1.45
CCNL1-223	ENST00000481173	ZNF512B	Q96KM6	892 aa	Predicted RBP	6	□□□□□ -1.45
CCNL1-223	ENST00000481173	PWWP2A	Q96N64	755 aa		6	□□□□□ -1.45
CCNL1-223	ENST00000481173	TAF6L	Q9Y6J9	622 aa		6	□□□□□ -1.45
CCNL1-223	ENST00000481173	ADAMTS20	P59510	1910 aa		5.99	□□□□□ -1.45
CCNL1-223	ENST00000481173	FADS2P1	A8MWK0	482 aa		5.99	□□□□□ -1.45
CCNL1-223	ENST00000481173	MEIS1	O00470	390 aa		5.99	□□□□□ -1.45
CCNL1-223	ENST00000481173	ABLIM1	O14639	778 aa		5.99	□□□□□ -1.45
CCNL1-223	ENST00000481173	XPC	Q01831	940 aa	Predicted RBP	5.99	□□□□□ -1.45
CCNL1-223	ENST00000481173	ERICH6B	Q5W0A0	696 aa		5.99	□□□□□ -1.45
CCNL1-223	ENST00000481173	GALNT18	Q6P9A2	607 aa		5.99	□□□□□ -1.45
CCNL1-223	ENST00000481173	FCRL2	Q96LA5	508 aa	Predicted RBP	5.99	□□□□□ -1.45
CCNL1-223	ENST00000481173	PRDM14	Q9GZV8	571 aa		5.99	□□□□□ -1.45
CCNL1-223	ENST00000481173	TNFRSF10D	Q9UBN6	386 aa		5.99	□□□□□ -1.45
CCNL1-223	ENST00000481173	ADRB1	P08588	477 aa		5.98	□□□□□ -1.45
CCNL1-223	ENST00000481173	PRKCA	P17252	672 aa		5.98	□□□□□ -1.45
CCNL1-223	ENST00000481173	GART	P22102	1010 aa		5.98	□□□□□ -1.45
CCNL1-223	ENST00000481173	ARL4A	P40617	200 aa		5.98	□□□□□ -1.45
CCNL1-223	ENST00000481173	TP53I13	Q8NBR0	393 aa	Predicted RBP	5.98	□□□□□ -1.45
CCNL1-223	ENST00000481173	NUP43	Q8NFH3	380 aa		5.98	□□□□□ -1.45
CCNL1-223	ENST00000481173	RSRP1	Q9BUV0	290 aa		5.98	□□□□□ -1.45
CCNL1-223	ENST00000481173	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	5.98	□□□□□ -1.45
CCNL1-223	ENST00000481173	LUC7L	Q9NQ29	371 aa	Known RBP	5.98	□□□□□ -1.45
CCNL1-223	ENST00000481173	PCDHB14	Q9Y5E9	798 aa		5.98	□□□□□ -1.45
CCNL1-223	ENST00000481173	PCDHA5	Q9Y5H7	936 aa		5.98	□□□□□ -1.45
CCNL1-223	ENST00000481173	WTIP	A6NIX2	430 aa	Predicted RBP	5.97	□□□□□ -1.45
CCNL1-223	ENST00000481173	SIGLEC6	O43699	453 aa		5.97	□□□□□ -1.45
CCNL1-223	ENST00000481173	BUB1B	O60566	1050 aa	Predicted RBP	5.97	□□□□□ -1.45
CCNL1-223	ENST00000481173	TAGLN	Q01995	201 aa	Known RBP	5.97	□□□□□ -1.45
CCNL1-223	ENST00000481173	MLEC	Q14165	292 aa		5.97	□□□□□ -1.45
CCNL1-223	ENST00000481173	OVOS1	Q6IE37	1185 aa		5.97	□□□□□ -1.45
CCNL1-223	ENST00000481173	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	5.97	□□□□□ -1.45
CCNL1-223	ENST00000481173	FAM196A	Q6ZSG2	479 aa		5.97	□□□□□ -1.45
CCNL1-223	ENST00000481173	TMC4	Q7Z404	712 aa		5.97	□□□□□ -1.45
CCNL1-223	ENST00000481173	LINC01356	Q8N9X3	169 aa		5.97	□□□□□ -1.45
CCNL1-223	ENST00000481173	CRELD1	Q96HD1	420 aa		5.97	□□□□□ -1.45
CCNL1-223	ENST00000481173	TEPSIN	Q96N21	525 aa		5.97	□□□□□ -1.45
CCNL1-223	ENST00000481173	BDH2	Q9BUT1	245 aa		5.97	□□□□□ -1.45
CCNL1-223	ENST00000481173	CDADC1	Q9BWV3	514 aa		5.97	□□□□□ -1.45
CCNL1-223	ENST00000481173	BRMS1	Q9HCU9	246 aa		5.97	□□□□□ -1.45
CCNL1-223	ENST00000481173	CHST7	Q9NS84	486 aa		5.97	□□□□□ -1.45
CCNL1-223	ENST00000481173	ERVK13-1	Q9NX77	482 aa		5.97	□□□□□ -1.45
CCNL1-223	ENST00000481173	ZC3H12D	A2A288	527 aa	Known RBP	5.96	□□□□□ -1.46
CCNL1-223	ENST00000481173	LIMS1	P48059	325 aa		5.96	□□□□□ -1.46
CCNL1-223	ENST00000481173	CEBPA	P49715	358 aa	Predicted RBP	5.96	□□□□□ -1.46
CCNL1-223	ENST00000481173	CYP4F8	P98187	520 aa		5.96	□□□□□ -1.46
CCNL1-223	ENST00000481173	LAPTM5	Q13571	262 aa		5.96	□□□□□ -1.46
CCNL1-223	ENST00000481173	SLCO6A1	Q86UG4	719 aa		5.96	□□□□□ -1.46
CCNL1-223	ENST00000481173	GZF1	Q9H116	711 aa	Predicted RBP	5.96	□□□□□ -1.46
CCNL1-223	ENST00000481173	TNFRSF12A	Q9NP84	129 aa		5.96	□□□□□ -1.46
CCNL1-223	ENST00000481173	GFOD1	Q9NXC2	390 aa		5.96	□□□□□ -1.46
CCNL1-223	ENST00000481173	GMIP	Q9P107	970 aa		5.96	□□□□□ -1.46
CCNL1-223	ENST00000481173	FFAR3	O14843	346 aa		5.95	□□□□□ -1.46
CCNL1-223	ENST00000481173	PLP2	Q04941	152 aa		5.95	□□□□□ -1.46
CCNL1-223	ENST00000481173	PWP1	Q13610	501 aa		5.95	□□□□□ -1.46
CCNL1-223	ENST00000481173	CWF19L2	Q2TBE0	894 aa	Known RBP	5.95	□□□□□ -1.46
CCNL1-223	ENST00000481173	RPTN	Q6XPR3	784 aa		5.95	□□□□□ -1.46
CCNL1-223	ENST00000481173	FRMD5	Q7Z6J6	570 aa		5.95	□□□□□ -1.46
CCNL1-223	ENST00000481173	KBTBD4	Q9NVX7	518 aa		5.95	□□□□□ -1.46
CCNL1-223	ENST00000481173	IMPACT	Q9P2X3	320 aa		5.95	□□□□□ -1.46
CCNL1-223	ENST00000481173	PRICKLE3	O43900	615 aa	Predicted RBP	5.94	□□□□□ -1.46
CCNL1-223	ENST00000481173	CLEC3A	O75596	197 aa		5.94	□□□□□ -1.46
CCNL1-223	ENST00000481173	CTSK	P43235	329 aa		5.94	□□□□□ -1.46
CCNL1-223	ENST00000481173	TMEM62	Q0P6H9	643 aa		5.94	□□□□□ -1.46
CCNL1-223	ENST00000481173	RTP5	Q14D33	572 aa		5.94	□□□□□ -1.46
CCNL1-223	ENST00000481173	PLEKHN1	Q494U1	663 aa	Predicted RBP	5.94	□□□□□ -1.46
CCNL1-223	ENST00000481173	FBXL19	Q6PCT2	694 aa		5.94	□□□□□ -1.46
CCNL1-223	ENST00000481173	CRTC3	Q6UUV7	619 aa		5.94	□□□□□ -1.46
CCNL1-223	ENST00000481173	MKRN2	Q9H000	416 aa	Known RBP	5.94	□□□□□ -1.46
CCNL1-223	ENST00000481173	COPRS	Q9NQ92	184 aa		5.94	□□□□□ -1.46
CCNL1-223	ENST00000481173	AP5S1	Q9NUS5	200 aa		5.94	□□□□□ -1.46
CCNL1-223	ENST00000481173	VTI1B	Q9UEU0	232 aa		5.94	□□□□□ -1.46
CCNL1-223	ENST00000481173	ACSL6	Q9UKU0	697 aa		5.94	□□□□□ -1.46
CCNL1-223	ENST00000481173	SORBS3	O60504	671 aa		5.93	□□□□□ -1.46
CCNL1-223	ENST00000481173	ZNF205	O95201	554 aa		5.93	□□□□□ -1.46
CCNL1-223	ENST00000481173	ZNF200	P98182	395 aa	Predicted RBP	5.93	□□□□□ -1.46
CCNL1-223	ENST00000481173	EFEMP1	Q12805	493 aa		5.93	□□□□□ -1.46
CCNL1-223	ENST00000481173	CDCP2	Q5VXM1	449 aa		5.93	□□□□□ -1.46
CCNL1-223	ENST00000481173	FBXO33	Q7Z6M2	555 aa		5.93	□□□□□ -1.46
CCNL1-223	ENST00000481173	ADGRG2	Q8IZP9	1017 aa		5.93	□□□□□ -1.46
CCNL1-223	ENST00000481173	ATG4C	Q96DT6	458 aa		5.93	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms