RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 CCDC155Q8N6L0 562 aa11.88□□□□□ -0.51
SIK3-210ENST00000480468 MB21D1Q8N884 522 aa11.88□□□□□ -0.51
SIK3-210ENST00000480468 RETREG2Q8NC44 543 aa11.88□□□□□ -0.51
SIK3-210ENST00000480468 XAGE3Q8WTP9 111 aa11.88□□□□□ -0.51
SIK3-210ENST00000480468 PXDNQ92626 1479 aa11.88□□□□□ -0.51
SIK3-210ENST00000480468 AFDNP55196 1824 aaKnown RBP11.87□□□□□ -0.51
SIK3-210ENST00000480468 A0A087X0B3 334 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 ANKRD33BA6NCL7 494 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 RCCD1A6NED2 376 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 H7C1D1 291 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 BMP15O95972 392 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 PDHBP11177 359 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 LIFRP42702 1097 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 AFMP43652 599 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 ATP2B2Q01814 1243 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 TBC1D8BQ0IIM8 1120 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 KIF5AQ12840 1032 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 ITGB3BPQ13352 177 aaPredicted RBP11.87□□□□□ -0.51
SIK3-210ENST00000480468 C1orf141Q5JVX7 400 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 CYB5R4Q7L1T6 521 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 MICU3Q86XE3 530 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 ZNF507Q8TCN5 953 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 FERMT2Q96AC1 680 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 SLC26A6Q9BXS9 759 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 GDF3Q9NR23 364 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 TMEM2Q9UHN6 1383 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 ANKRD18BA2A2Z9 1011 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 C5orf60A6NFR6 353 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 TACC1O75410 805 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 DNAJC8O75937 253 aaPredicted RBP11.87□□□□□ -0.51
SIK3-210ENST00000480468 KRT14P02533 472 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 GHRP10912 638 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 EEF1GP26641 437 aaKnown RBP11.87□□□□□ -0.51
SIK3-210ENST00000480468 TIMM10P62072 90 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 PAK2Q13177 524 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 GRIPAP1Q4V328 841 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 KCTD16Q68DU8 428 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 ANKRD13DQ6ZTN6 518 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 SMYD4Q8IYR2 804 aaPredicted RBP11.87□□□□□ -0.51
SIK3-210ENST00000480468 ARMC2Q8NEN0 867 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 RNF217Q8TC41 542 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 IGDCC4Q8TDY8 1250 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.87□□□□□ -0.51
SIK3-210ENST00000480468 RSRC1Q96IZ7 334 aaKnown RBP11.87□□□□□ -0.51
SIK3-210ENST00000480468 PYM1Q9BRP8 204 aaKnown RBP11.87□□□□□ -0.51
SIK3-210ENST00000480468 NUP58Q9BVL2 599 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 ZNHIT6Q9NWK9 470 aaKnown RBP11.87□□□□□ -0.51
SIK3-210ENST00000480468 HYOU1Q9Y4L1 999 aa11.87□□□□□ -0.51
SIK3-210ENST00000480468 PDS5AQ29RF7 1337 aaKnown RBP11.87□□□□□ -0.51
SIK3-210ENST00000480468 DISP2A7MBM2 1401 aa11.86□□□□□ -0.51
SIK3-210ENST00000480468 SEC24CP53992 1094 aa11.86□□□□□ -0.51
SIK3-210ENST00000480468 SLMAPQ14BN4 828 aa11.86□□□□□ -0.51
SIK3-210ENST00000480468 RRAGBQ5VZM2 374 aa11.86□□□□□ -0.51
SIK3-210ENST00000480468 CRELD2Q6UXH1 353 aaPredicted RBP11.86□□□□□ -0.51
SIK3-210ENST00000480468 COPS6Q7L5N1 327 aa11.86□□□□□ -0.51
SIK3-210ENST00000480468 CCDC43Q96MW1 224 aaKnown RBP11.86□□□□□ -0.51
SIK3-210ENST00000480468 OSBPL7Q9BZF2 842 aa11.86□□□□□ -0.51
SIK3-210ENST00000480468 TTYH3Q9C0H2 523 aa11.86□□□□□ -0.51
SIK3-210ENST00000480468 LY9Q9HBG7 655 aa11.86□□□□□ -0.51
SIK3-210ENST00000480468 RNF14Q9UBS8 474 aa11.86□□□□□ -0.51
SIK3-210ENST00000480468 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.86□□□□□ -0.51
SIK3-210ENST00000480468 PHRF1Q9P1Y6 1649 aaKnown RBP11.86□□□□□ -0.51
SIK3-210ENST00000480468 GMNCA6NCL1 334 aa11.86□□□□□ -0.51
SIK3-210ENST00000480468 E7EVH7 732 aa11.86□□□□□ -0.51
SIK3-210ENST00000480468 CIAO1O76071 339 aa11.86□□□□□ -0.51
SIK3-210ENST00000480468 C8orf74Q6P047 294 aa11.86□□□□□ -0.51
SIK3-210ENST00000480468 LMBR1LQ6UX01 489 aa11.86□□□□□ -0.51
SIK3-210ENST00000480468 LRIG3Q6UXM1 1119 aa11.86□□□□□ -0.51
SIK3-210ENST00000480468 TRIM22Q8IYM9 498 aa11.86□□□□□ -0.51
SIK3-210ENST00000480468 WHAMMQ8TF30 809 aa11.86□□□□□ -0.51
SIK3-210ENST00000480468 NELFBQ8WX92 580 aa11.86□□□□□ -0.51
SIK3-210ENST00000480468 PIK3R5Q8WYR1 880 aa11.86□□□□□ -0.51
SIK3-210ENST00000480468 OSBPL9Q96SU4 736 aa11.86□□□□□ -0.51
SIK3-210ENST00000480468 NHEJ1Q9H9Q4 299 aaPredicted RBP11.86□□□□□ -0.51
SIK3-210ENST00000480468 SLC24A3Q9HC58 644 aa11.86□□□□□ -0.51
SIK3-210ENST00000480468 RMND1Q9NWS8 449 aa11.86□□□□□ -0.51
SIK3-210ENST00000480468 CCDC9Q9Y3X0 531 aaKnown RBP11.86□□□□□ -0.51
SIK3-210ENST00000480468 RGPD8O14715 1765 aaPredicted RBP11.85□□□□□ -0.51
SIK3-210ENST00000480468 NFAT5O94916 1531 aa11.85□□□□□ -0.51
SIK3-210ENST00000480468 TRIM75PA6NK02 468 aa11.85□□□□□ -0.51
SIK3-210ENST00000480468 PATL2C9JE40 543 aaKnown RBP11.85□□□□□ -0.51
SIK3-210ENST00000480468 DNM1LO00429 736 aa11.85□□□□□ -0.51
SIK3-210ENST00000480468 GPAA1O43292 621 aa11.85□□□□□ -0.51
SIK3-210ENST00000480468 USO1O60763 962 aaKnown RBP11.85□□□□□ -0.51
SIK3-210ENST00000480468 PAEPP09466 180 aa11.85□□□□□ -0.51
SIK3-210ENST00000480468 PARP1P09874 1014 aaKnown RBP11.85□□□□□ -0.51
SIK3-210ENST00000480468 RXRAP19793 462 aa11.85□□□□□ -0.51
SIK3-210ENST00000480468 GBP2P32456 591 aaPredicted RBP11.85□□□□□ -0.51
SIK3-210ENST00000480468 PAFAH1B1P43034 410 aa11.85□□□□□ -0.51
SIK3-210ENST00000480468 SCTRP47872 440 aa11.85□□□□□ -0.51
SIK3-210ENST00000480468 ZBED6P86452 979 aa11.85□□□□□ -0.51
SIK3-210ENST00000480468 ZNF658Q5TYW1 1059 aaPredicted RBP11.85□□□□□ -0.51
SIK3-210ENST00000480468 TBC1D10CQ8IV04 446 aa11.85□□□□□ -0.51
SIK3-210ENST00000480468 RASSF8Q8NHQ8 419 aa11.85□□□□□ -0.51
SIK3-210ENST00000480468 ZNF483Q8TF39 744 aaPredicted RBP11.85□□□□□ -0.51
SIK3-210ENST00000480468 SH3GL3Q99963 347 aa11.85□□□□□ -0.51
SIK3-210ENST00000480468 HAUS2Q9NVX0 235 aa11.85□□□□□ -0.51
SIK3-210ENST00000480468 TFR2Q9UP52 801 aa11.85□□□□□ -0.51
SIK3-210ENST00000480468 C5P01031 1676 aa11.85□□□□□ -0.51
SIK3-210ENST00000480468 MYH7P12883 1935 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms