RNA–Protein interactions for RNA: ENST00000480226.5

ITGB1-212, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-212ENST00000480226 SEMA7AO75326 666 aa7.23□□□□□ -1.25
ITGB1-212ENST00000480226 USP2O75604 605 aaPredicted RBP7.23□□□□□ -1.25
ITGB1-212ENST00000480226 VAMP1P23763 118 aa7.23□□□□□ -1.25
ITGB1-212ENST00000480226 BBS9Q3SYG4 887 aa7.23□□□□□ -1.25
ITGB1-212ENST00000480226 CEP128Q6ZU80 1094 aa7.23□□□□□ -1.25
ITGB1-212ENST00000480226 NLRX1Q86UT6 975 aa7.23□□□□□ -1.25
ITGB1-212ENST00000480226 SLC9A7Q96T83 725 aa7.23□□□□□ -1.25
ITGB1-212ENST00000480226 CCDC9Q9Y3X0 531 aaKnown RBP7.23□□□□□ -1.25
ITGB1-212ENST00000480226 NOTOA8MTQ0 251 aa7.22□□□□□ -1.25
ITGB1-212ENST00000480226 DLG4P78352 724 aa7.22□□□□□ -1.25
ITGB1-212ENST00000480226 FANCCQ00597 558 aa7.22□□□□□ -1.25
ITGB1-212ENST00000480226 AUHQ13825 339 aaKnown RBP7.22□□□□□ -1.25
ITGB1-212ENST00000480226 LCNL1Q6ZST4 164 aa7.22□□□□□ -1.25
ITGB1-212ENST00000480226 SIRT2Q8IXJ6 389 aa7.22□□□□□ -1.25
ITGB1-212ENST00000480226 ZNF428Q96B54 188 aa7.22□□□□□ -1.25
ITGB1-212ENST00000480226 CRTAC1Q9NQ79 661 aa7.22□□□□□ -1.25
ITGB1-212ENST00000480226 GFOD1Q9NXC2 390 aa7.22□□□□□ -1.25
ITGB1-212ENST00000480226 PRR13Q9NZ81 148 aa7.22□□□□□ -1.25
ITGB1-212ENST00000480226 TNFRSF10DQ9UBN6 386 aa7.22□□□□□ -1.25
ITGB1-212ENST00000480226 ZNRF3Q9ULT6 936 aa7.22□□□□□ -1.25
ITGB1-212ENST00000480226 TEX51A0A1B0GUA7 166 aa7.21□□□□□ -1.26
ITGB1-212ENST00000480226 MYOCOSA0A1B0GUC4 107 aa7.21□□□□□ -1.26
ITGB1-212ENST00000480226 GALK1P51570 392 aa7.21□□□□□ -1.26
ITGB1-212ENST00000480226 LINC00310P59036 64 aa7.21□□□□□ -1.26
ITGB1-212ENST00000480226 ADGRF1Q5T601 910 aa7.21□□□□□ -1.26
ITGB1-212ENST00000480226 AMIGO3Q86WK7 504 aa7.21□□□□□ -1.26
ITGB1-212ENST00000480226 MRRFQ96E11 262 aaKnown RBP7.21□□□□□ -1.26
ITGB1-212ENST00000480226 HHIPL1Q96JK4 782 aa7.21□□□□□ -1.26
ITGB1-212ENST00000480226 FCRL2Q96LA5 508 aaPredicted RBP7.21□□□□□ -1.26
ITGB1-212ENST00000480226 SUCOQ9UBS9 1254 aaKnown RBP7.21□□□□□ -1.26
ITGB1-212ENST00000480226 MEIS1O00470 390 aa7.2□□□□□ -1.26
ITGB1-212ENST00000480226 BMP8BP34820 402 aa7.2□□□□□ -1.26
ITGB1-212ENST00000480226 RTP1P59025 263 aa7.2□□□□□ -1.26
ITGB1-212ENST00000480226 ZPBP2Q6X784 338 aa7.2□□□□□ -1.26
ITGB1-212ENST00000480226 CCDC144CPQ8IYA2 1237 aa7.2□□□□□ -1.26
ITGB1-212ENST00000480226 RNF34Q969K3 372 aa7.2□□□□□ -1.26
ITGB1-212ENST00000480226 FERD3LQ96RJ6 166 aa7.2□□□□□ -1.26
ITGB1-212ENST00000480226 PODXL2Q9NZ53 605 aa7.2□□□□□ -1.26
ITGB1-212ENST00000480226 MINPP1Q9UNW1 487 aa7.2□□□□□ -1.26
ITGB1-212ENST00000480226 NUAK1O60285 661 aa7.19□□□□□ -1.26
ITGB1-212ENST00000480226 PNLIPP16233 465 aa7.19□□□□□ -1.26
ITGB1-212ENST00000480226 ZNF394Q53GI3 561 aa7.19□□□□□ -1.26
ITGB1-212ENST00000480226 GALNT18Q6P9A2 607 aa7.19□□□□□ -1.26
ITGB1-212ENST00000480226 C7orf61Q8IZ16 206 aa7.19□□□□□ -1.26
ITGB1-212ENST00000480226 TAB3Q8N5C8 712 aaPredicted RBP7.19□□□□□ -1.26
ITGB1-212ENST00000480226 SMARCC1Q92922 1105 aaPredicted RBP7.19□□□□□ -1.26
ITGB1-212ENST00000480226 TM9SF2Q99805 663 aa7.19□□□□□ -1.26
ITGB1-212ENST00000480226 FAM86C2PA6NEL3 165 aa7.18□□□□□ -1.26
ITGB1-212ENST00000480226 WTIPA6NIX2 430 aaPredicted RBP7.18□□□□□ -1.26
ITGB1-212ENST00000480226 FADS2P1A8MWK0 482 aa7.18□□□□□ -1.26
ITGB1-212ENST00000480226 HRKO00198 91 aa7.18□□□□□ -1.26
ITGB1-212ENST00000480226 ZNF205O95201 554 aa7.18□□□□□ -1.26
ITGB1-212ENST00000480226 GSNP06396 782 aa7.18□□□□□ -1.26
ITGB1-212ENST00000480226 ACRP10323 421 aa7.18□□□□□ -1.26
ITGB1-212ENST00000480226 VAV1P15498 845 aa7.18□□□□□ -1.26
ITGB1-212ENST00000480226 FBXW10Q5XX13 1052 aa7.18□□□□□ -1.26
ITGB1-212ENST00000480226 METTL16Q86W50 562 aaKnown RBP7.18□□□□□ -1.26
ITGB1-212ENST00000480226 DSCC1Q9BVC3 393 aa7.18□□□□□ -1.26
ITGB1-212ENST00000480226 CDADC1Q9BWV3 514 aa7.18□□□□□ -1.26
ITGB1-212ENST00000480226 PCDHGB7Q9Y5F8 929 aa7.18□□□□□ -1.26
ITGB1-212ENST00000480226 ARL4AP40617 200 aa7.17□□□□□ -1.26
ITGB1-212ENST00000480226 PMS1P54277 932 aaKnown RBP7.17□□□□□ -1.26
ITGB1-212ENST00000480226 SRSF3P84103 164 aaKnown RBP7.17□□□□□ -1.26
ITGB1-212ENST00000480226 OLFML2BQ68BL8 750 aa7.17□□□□□ -1.26
ITGB1-212ENST00000480226 IRF2BPLQ9H1B7 796 aa7.17□□□□□ -1.26
ITGB1-212ENST00000480226 SIRT5Q9NXA8 310 aa7.17□□□□□ -1.26
ITGB1-212ENST00000480226 CNOT6Q9ULM6 557 aaKnown RBP7.17□□□□□ -1.26
ITGB1-212ENST00000480226 TAF6LQ9Y6J9 622 aa7.17□□□□□ -1.26
ITGB1-212ENST00000480226 A0A1W2PQ45 241 aaPredicted RBP7.16□□□□□ -1.26
ITGB1-212ENST00000480226 A0A1W2PQY0 241 aa7.16□□□□□ -1.26
ITGB1-212ENST00000480226 C9IYK1 514 aa7.16□□□□□ -1.26
ITGB1-212ENST00000480226 ABLIM1O14639 778 aa7.16□□□□□ -1.26
ITGB1-212ENST00000480226 EFEMP2O95967 443 aa7.16□□□□□ -1.26
ITGB1-212ENST00000480226 CTSKP43235 329 aa7.16□□□□□ -1.26
ITGB1-212ENST00000480226 RACK1P63244 317 aaKnown RBP7.16□□□□□ -1.26
ITGB1-212ENST00000480226 LAPTM5Q13571 262 aa7.16□□□□□ -1.26
ITGB1-212ENST00000480226 HSF5Q4G112 596 aaPredicted RBP7.16□□□□□ -1.26
ITGB1-212ENST00000480226 ANKRD39Q53RE8 183 aa7.16□□□□□ -1.26
ITGB1-212ENST00000480226 ZNF385BQ569K4 471 aa7.16□□□□□ -1.26
ITGB1-212ENST00000480226 CWF19L1Q69YN2 538 aaKnown RBP7.16□□□□□ -1.26
ITGB1-212ENST00000480226 RBBP8NLQ8NC74 664 aaPredicted RBP7.16□□□□□ -1.26
ITGB1-212ENST00000480226 PLCD4Q9BRC7 762 aa7.16□□□□□ -1.26
ITGB1-212ENST00000480226 SGPP1Q9BX95 441 aa7.16□□□□□ -1.26
ITGB1-212ENST00000480226 GCM1Q9NP62 436 aa7.16□□□□□ -1.26
ITGB1-212ENST00000480226 ERVK13-1Q9NX77 482 aa7.16□□□□□ -1.26
ITGB1-212ENST00000480226 DDX41Q9UJV9 622 aaKnown RBP7.16□□□□□ -1.26
ITGB1-212ENST00000480226 GPR55Q9Y2T6 319 aaPredicted RBP7.16□□□□□ -1.26
ITGB1-212ENST00000480226 SCAMP3O14828 347 aaKnown RBP7.15□□□□□ -1.26
ITGB1-212ENST00000480226 MPOP05164 745 aa7.15□□□□□ -1.26
ITGB1-212ENST00000480226 ERVFRD-1P60508 538 aa7.15□□□□□ -1.26
ITGB1-212ENST00000480226 COL9A2Q14055 689 aaPredicted RBP7.15□□□□□ -1.26
ITGB1-212ENST00000480226 NOL9Q5SY16 702 aaKnown RBP7.15□□□□□ -1.26
ITGB1-212ENST00000480226 CRTC3Q6UUV7 619 aa7.15□□□□□ -1.26
ITGB1-212ENST00000480226 AP5S1Q9NUS5 200 aa7.15□□□□□ -1.26
ITGB1-212ENST00000480226 RFXAPO00287 272 aa7.14□□□□□ -1.27
ITGB1-212ENST00000480226 GUCY2CP25092 1073 aa7.14□□□□□ -1.27
ITGB1-212ENST00000480226 HDLBPQ00341 1268 aaKnown RBP7.14□□□□□ -1.27
ITGB1-212ENST00000480226 UNC5AQ6ZN44 842 aa7.14□□□□□ -1.27
ITGB1-212ENST00000480226 SLCO6A1Q86UG4 719 aa7.14□□□□□ -1.27
ITGB1-212ENST00000480226 ZNF654Q8IZM8 581 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms