RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 RESP18Q5W5W9 173 aa12.61□□□□□ -0.39
VTI1A-204ENST00000480057 SLFN13Q68D06 897 aa12.61□□□□□ -0.39
VTI1A-204ENST00000480057 KRT25Q7Z3Z0 450 aa12.61□□□□□ -0.39
VTI1A-204ENST00000480057 GPKOWQ92917 476 aaPredicted RBP eCLIP12.61□□□□□ -0.39
VTI1A-204ENST00000480057 FERMT2Q96AC1 680 aa12.61□□□□□ -0.39
VTI1A-204ENST00000480057 HOOK2Q96ED9 719 aa12.61□□□□□ -0.39
VTI1A-204ENST00000480057 PIGSQ96S52 555 aa12.61□□□□□ -0.39
VTI1A-204ENST00000480057 GLT8D2Q9H1C3 349 aa12.61□□□□□ -0.39
VTI1A-204ENST00000480057 RBSNQ9H1K0 784 aa12.61□□□□□ -0.39
VTI1A-204ENST00000480057 SH2D4AQ9H788 454 aa12.61□□□□□ -0.39
VTI1A-204ENST00000480057 FBXO2Q9UK22 296 aaPredicted RBP12.61□□□□□ -0.39
VTI1A-204ENST00000480057 FRMPD2Q68DX3 1309 aaPredicted RBP12.61□□□□□ -0.39
VTI1A-204ENST00000480057 CCDC194A0A1B0GVG4 234 aa12.6□□□□□ -0.39
VTI1A-204ENST00000480057 F5H6K3 240 aa12.6□□□□□ -0.39
VTI1A-204ENST00000480057 ZBTB5O15062 677 aa12.6□□□□□ -0.39
VTI1A-204ENST00000480057 MARCKSP29966 332 aaPredicted RBP12.6□□□□□ -0.39
VTI1A-204ENST00000480057 SLC1A4P43007 532 aa12.6□□□□□ -0.39
VTI1A-204ENST00000480057 ATP2C1P98194 919 aaPredicted RBP12.6□□□□□ -0.39
VTI1A-204ENST00000480057 ATP2B2Q01814 1243 aa12.6□□□□□ -0.39
VTI1A-204ENST00000480057 KLRC3Q07444 240 aa12.6□□□□□ -0.39
VTI1A-204ENST00000480057 TRAF1Q13077 416 aa12.6□□□□□ -0.39
VTI1A-204ENST00000480057 CCDC96Q2M329 555 aa12.6□□□□□ -0.39
VTI1A-204ENST00000480057 NBPF9Q3BBW0 867 aa12.6□□□□□ -0.39
VTI1A-204ENST00000480057 TYW1BQ6NUM6 668 aa12.6□□□□□ -0.39
VTI1A-204ENST00000480057 BTNL9Q6UXG8 535 aa12.6□□□□□ -0.39
VTI1A-204ENST00000480057 CLEC10AQ8IUN9 316 aa12.6□□□□□ -0.39
VTI1A-204ENST00000480057 MICALL2Q8IY33 904 aa12.6□□□□□ -0.39
VTI1A-204ENST00000480057 ADGRF4Q8IZF3 695 aa12.6□□□□□ -0.39
VTI1A-204ENST00000480057 GPC2Q8N158 579 aa12.6□□□□□ -0.39
VTI1A-204ENST00000480057 ANP32BQ92688 251 aaKnown RBP12.6□□□□□ -0.39
VTI1A-204ENST00000480057 UBA5Q9GZZ9 404 aa12.6□□□□□ -0.39
VTI1A-204ENST00000480057 JMJD4Q9H9V9 463 aa12.6□□□□□ -0.39
VTI1A-204ENST00000480057 FAM13BQ9NYF5 915 aa12.6□□□□□ -0.39
VTI1A-204ENST00000480057 CNOT7Q9UIV1 285 aaKnown RBP12.6□□□□□ -0.39
VTI1A-204ENST00000480057 ZBTB21Q9ULJ3 1066 aa12.6□□□□□ -0.39
VTI1A-204ENST00000480057 PCDHA6Q9UN73 950 aa12.6□□□□□ -0.39
VTI1A-204ENST00000480057 MTMR7Q9Y216 660 aa12.6□□□□□ -0.39
VTI1A-204ENST00000480057 TMX2Q9Y320 296 aa12.6□□□□□ -0.39
VTI1A-204ENST00000480057 PCDHB6Q9Y5E3 794 aa12.6□□□□□ -0.39
VTI1A-204ENST00000480057 PCDHA8Q9Y5H6 950 aa12.6□□□□□ -0.39
VTI1A-204ENST00000480057 H7C1D1 291 aa12.59□□□□□ -0.39
VTI1A-204ENST00000480057 LAD1O00515 517 aa12.59□□□□□ -0.39
VTI1A-204ENST00000480057 GDF11O95390 407 aa12.59□□□□□ -0.39
VTI1A-204ENST00000480057 ASNSP08243 561 aa12.59□□□□□ -0.39
VTI1A-204ENST00000480057 VEGFAP15692 232 aaPredicted RBP12.59□□□□□ -0.39
VTI1A-204ENST00000480057 PFKFB1P16118 471 aa12.59□□□□□ -0.39
VTI1A-204ENST00000480057 CAP2P40123 477 aa12.59□□□□□ -0.39
VTI1A-204ENST00000480057 NDUFA8P51970 172 aa12.59□□□□□ -0.39
VTI1A-204ENST00000480057 RASA3Q14644 834 aa12.59□□□□□ -0.39
VTI1A-204ENST00000480057 RRP1BQ14684 758 aaKnown RBP12.59□□□□□ -0.39
VTI1A-204ENST00000480057 KIF4BQ2VIQ3 1234 aa12.59□□□□□ -0.39
VTI1A-204ENST00000480057 EARS2Q5JPH6 523 aaKnown RBP12.59□□□□□ -0.39
VTI1A-204ENST00000480057 ARL6IP4Q66PJ3 421 aaKnown RBP12.59□□□□□ -0.39
VTI1A-204ENST00000480057 MCTP2Q6DN12 878 aa12.59□□□□□ -0.39
VTI1A-204ENST00000480057 SHC4Q6S5L8 630 aa12.59□□□□□ -0.39
VTI1A-204ENST00000480057 PIK3AP1Q6ZUJ8 805 aa12.59□□□□□ -0.39
VTI1A-204ENST00000480057 RASGRP2Q7LDG7 609 aa12.59□□□□□ -0.39
VTI1A-204ENST00000480057 APOBEC3FQ8IUX4 373 aaKnown RBP12.59□□□□□ -0.39
VTI1A-204ENST00000480057 PIBF1Q8WXW3 757 aa12.59□□□□□ -0.39
VTI1A-204ENST00000480057 TMEM39BQ9GZU3 492 aa12.59□□□□□ -0.39
VTI1A-204ENST00000480057 GPCPD1Q9NPB8 672 aa12.59□□□□□ -0.39
VTI1A-204ENST00000480057 PPP2R3BQ9Y5P8 575 aa12.59□□□□□ -0.39
VTI1A-204ENST00000480057 ZNF541Q9H0D2 1346 aa12.59□□□□□ -0.39
VTI1A-204ENST00000480057 A0A1B0GVL5 298 aa12.58□□□□□ -0.4
VTI1A-204ENST00000480057 SMCO2A6NFE2 343 aa12.58□□□□□ -0.4
VTI1A-204ENST00000480057 PLA2G6O60733 806 aa12.58□□□□□ -0.4
VTI1A-204ENST00000480057 ZNF202O95125 648 aa12.58□□□□□ -0.4
VTI1A-204ENST00000480057 SBF1O95248 1867 aa12.58□□□□□ -0.4
VTI1A-204ENST00000480057 NDUFB10O96000 172 aa12.58□□□□□ -0.4
VTI1A-204ENST00000480057 SLURP2P0DP57 97 aa12.58□□□□□ -0.4
VTI1A-204ENST00000480057 SYKP43405 635 aa12.58□□□□□ -0.4
VTI1A-204ENST00000480057 ADCY7P51828 1080 aa12.58□□□□□ -0.4
VTI1A-204ENST00000480057 TPRNQ4KMQ1 711 aa12.58□□□□□ -0.4
VTI1A-204ENST00000480057 SASS6Q6UVJ0 657 aa12.58□□□□□ -0.4
VTI1A-204ENST00000480057 ARHGAP27Q6ZUM4 889 aa12.58□□□□□ -0.4
VTI1A-204ENST00000480057 HOMER1Q86YM7 354 aa12.58□□□□□ -0.4
VTI1A-204ENST00000480057 TEPSINQ96N21 525 aa12.58□□□□□ -0.4
VTI1A-204ENST00000480057 PYM1Q9BRP8 204 aaKnown RBP12.58□□□□□ -0.4
VTI1A-204ENST00000480057 FHDC1Q9C0D6 1143 aaPredicted RBP12.58□□□□□ -0.4
VTI1A-204ENST00000480057 VAT1LQ9HCJ6 419 aa12.58□□□□□ -0.4
VTI1A-204ENST00000480057 GOPCQ9HD26 462 aa12.58□□□□□ -0.4
VTI1A-204ENST00000480057 BAZ2BQ9UIF8 2168 aaKnown RBP12.58□□□□□ -0.4
VTI1A-204ENST00000480057 GJA3Q9Y6H8 435 aa12.58□□□□□ -0.4
VTI1A-204ENST00000480057 FAM205CA6NFA0 338 aa12.57□□□□□ -0.4
VTI1A-204ENST00000480057 BMP3P12645 472 aa12.57□□□□□ -0.4
VTI1A-204ENST00000480057 JAG1P78504 1218 aa12.57□□□□□ -0.4
VTI1A-204ENST00000480057 TYRO3Q06418 890 aa12.57□□□□□ -0.4
VTI1A-204ENST00000480057 NONOQ15233 471 aaKnown RBP eCLIP12.57□□□□□ -0.4
VTI1A-204ENST00000480057 CAMK4Q16566 473 aa12.57□□□□□ -0.4
VTI1A-204ENST00000480057 DCAF15Q66K64 600 aa12.57□□□□□ -0.4
VTI1A-204ENST00000480057 TTBK2Q6IQ55 1244 aa12.57□□□□□ -0.4
VTI1A-204ENST00000480057 REXO1Q8N1G1 1221 aaKnown RBP12.57□□□□□ -0.4
VTI1A-204ENST00000480057 CPVLQ9H3G5 476 aa12.57□□□□□ -0.4
VTI1A-204ENST00000480057 RIC8AQ9NPQ8 531 aa12.57□□□□□ -0.4
VTI1A-204ENST00000480057 GPRC5DQ9NZD1 345 aa12.57□□□□□ -0.4
VTI1A-204ENST00000480057 USP25Q9UHP3 1055 aa12.57□□□□□ -0.4
VTI1A-204ENST00000480057 HOOK1Q9UJC3 728 aaKnown RBP12.57□□□□□ -0.4
VTI1A-204ENST00000480057 SHTN1A0MZ66 631 aa12.56□□□□□ -0.4
VTI1A-204ENST00000480057 PHF20L1A8MW92 1017 aa12.56□□□□□ -0.4
VTI1A-204ENST00000480057 PRPHP41219 470 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms