RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 FBXO40Q9UH90 709 aa17.83■□□□□ 0.44
PRKN-207ENST00000479615 COLQQ9Y215 455 aaPredicted RBP17.83■□□□□ 0.44
PRKN-207ENST00000479615 SUPT16HQ9Y5B9 1047 aaKnown RBP17.83■□□□□ 0.44
PRKN-207ENST00000479615 ZNF236Q9UL36 1845 aa17.83■□□□□ 0.44
PRKN-207ENST00000479615 CCDC171Q6TFL3 1326 aa17.82■□□□□ 0.44
PRKN-207ENST00000479615 SEPT4O43236 478 aa17.82■□□□□ 0.44
PRKN-207ENST00000479615 COL6A1P12109 1028 aa17.82■□□□□ 0.44
PRKN-207ENST00000479615 SDSP20132 328 aa17.82■□□□□ 0.44
PRKN-207ENST00000479615 SLC1A4P43007 532 aa17.82■□□□□ 0.44
PRKN-207ENST00000479615 STAT2P52630 851 aa17.82■□□□□ 0.44
PRKN-207ENST00000479615 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.82■□□□□ 0.442e-15■■■■■ 44.8
PRKN-207ENST00000479615 FAM227BQ96M60 508 aa17.82■□□□□ 0.44
PRKN-207ENST00000479615 NUP88Q99567 741 aaPredicted RBP17.82■□□□□ 0.44
PRKN-207ENST00000479615 STX8Q9UNK0 236 aa17.82■□□□□ 0.44
PRKN-207ENST00000479615 A0A0D9SFI3 127 aa17.81■□□□□ 0.44
PRKN-207ENST00000479615 A0A1W2PPC1 479 aa17.81■□□□□ 0.44
PRKN-207ENST00000479615 RANBP6O60518 1105 aaKnown RBP17.81■□□□□ 0.44
PRKN-207ENST00000479615 NOVP48745 357 aa17.81■□□□□ 0.44
PRKN-207ENST00000479615 NMIQ13287 307 aaPredicted RBP17.81■□□□□ 0.44
PRKN-207ENST00000479615 VPS53Q5VIR6 699 aa17.81■□□□□ 0.44
PRKN-207ENST00000479615 SNRNP48Q6IEG0 339 aaKnown RBP17.81■□□□□ 0.44
PRKN-207ENST00000479615 LRRC47Q8N1G4 583 aaKnown RBP17.81■□□□□ 0.44
PRKN-207ENST00000479615 CHST13Q8NET6 341 aa17.81■□□□□ 0.44
PRKN-207ENST00000479615 STAG1Q8WVM7 1258 aa17.81■□□□□ 0.44
PRKN-207ENST00000479615 KIFC2Q96AC6 838 aa17.81■□□□□ 0.44
PRKN-207ENST00000479615 RNF41Q9H4P4 317 aaPredicted RBP17.81■□□□□ 0.44
PRKN-207ENST00000479615 TCP11L1Q9NUJ3 509 aa17.81■□□□□ 0.44
PRKN-207ENST00000479615 DNM1LO00429 736 aa17.8■□□□□ 0.44
PRKN-207ENST00000479615 CTDSPL2Q05D32 466 aa17.8■□□□□ 0.44
PRKN-207ENST00000479615 ZNF792Q3KQV3 632 aa17.8■□□□□ 0.44
PRKN-207ENST00000479615 RCSD1Q6JBY9 416 aa17.8■□□□□ 0.44
PRKN-207ENST00000479615 CHRDL2Q6WN34 429 aa17.8■□□□□ 0.44
PRKN-207ENST00000479615 DDX11Q96FC9 970 aa17.8■□□□□ 0.44
PRKN-207ENST00000479615 TINF2Q9BSI4 451 aa17.8■□□□□ 0.44
PRKN-207ENST00000479615 DIAPH3Q9NSV4 1193 aa17.8■□□□□ 0.44
PRKN-207ENST00000479615 PCDH10Q9P2E7 1040 aa17.8■□□□□ 0.44
PRKN-207ENST00000479615 TKFCQ3LXA3 575 aa17.79■□□□□ 0.44
PRKN-207ENST00000479615 ZNF467Q7Z7K2 595 aaPredicted RBP17.79■□□□□ 0.44
PRKN-207ENST00000479615 TTC14Q96N46 770 aa17.79■□□□□ 0.44
PRKN-207ENST00000479615 IL17RBQ9NRM6 502 aa17.79■□□□□ 0.44
PRKN-207ENST00000479615 TOMM22Q9NS69 142 aa17.79■□□□□ 0.44
PRKN-207ENST00000479615 TMEM232C9JQI7 657 aa17.78■□□□□ 0.44
PRKN-207ENST00000479615 IKQ13123 557 aaPredicted RBP17.78■□□□□ 0.44
PRKN-207ENST00000479615 MFSD6Q6ZSS7 791 aa17.78■□□□□ 0.44
PRKN-207ENST00000479615 CPXCR1Q8N123 301 aa17.78■□□□□ 0.44
PRKN-207ENST00000479615 TRPV1Q8NER1 839 aa17.78■□□□□ 0.44
PRKN-207ENST00000479615 DCAF4Q8WV16 495 aa17.78■□□□□ 0.44
PRKN-207ENST00000479615 PNMA2Q9UL42 364 aa17.78■□□□□ 0.44
PRKN-207ENST00000479615 CNPY2Q9Y2B0 182 aa17.78■□□□□ 0.44
PRKN-207ENST00000479615 PFASO15067 1338 aa17.77■□□□□ 0.44
PRKN-207ENST00000479615 SYNGAP1Q96PV0 1343 aa17.77■□□□□ 0.44
PRKN-207ENST00000479615 CEP290O15078 2479 aa17.77■□□□□ 0.44
PRKN-207ENST00000479615 KBTBD13C9JR72 458 aa17.77■□□□□ 0.44
PRKN-207ENST00000479615 ZNF213O14771 459 aa17.77■□□□□ 0.44
PRKN-207ENST00000479615 TOP1P11387 765 aaKnown RBP17.77■□□□□ 0.44
PRKN-207ENST00000479615 MCCP23508 829 aa17.77■□□□□ 0.44
PRKN-207ENST00000479615 CCDC178Q5BJE1 867 aa17.77■□□□□ 0.44
PRKN-207ENST00000479615 AKNAD1Q5T1N1 836 aa17.77■□□□□ 0.44
PRKN-207ENST00000479615 MAMDC4Q6UXC1 1216 aa17.77■□□□□ 0.44
PRKN-207ENST00000479615 ZNF589Q86UQ0 364 aaPredicted RBP17.77■□□□□ 0.44
PRKN-207ENST00000479615 ANKRD35Q8N283 1001 aa17.77■□□□□ 0.44
PRKN-207ENST00000479615 PRO3102Q9H379 93 aa17.77■□□□□ 0.44
PRKN-207ENST00000479615 CTNNA3Q9UI47 895 aa17.77■□□□□ 0.44
PRKN-207ENST00000479615 ISY1Q9ULR0 285 aaKnown RBP17.77■□□□□ 0.44
PRKN-207ENST00000479615 DNAJC25-GNG10A0A024R161 153 aa17.76■□□□□ 0.43
PRKN-207ENST00000479615 PGK2P07205 417 aa17.76■□□□□ 0.43
PRKN-207ENST00000479615 RARBP10826 455 aa17.76■□□□□ 0.43
PRKN-207ENST00000479615 BMP8BP34820 402 aa17.76■□□□□ 0.43
PRKN-207ENST00000479615 RRP12Q5JTH9 1297 aaKnown RBP17.76■□□□□ 0.43
PRKN-207ENST00000479615 C7orf61Q8IZ16 206 aa17.76■□□□□ 0.43
PRKN-207ENST00000479615 ESR2Q92731 530 aa17.76■□□□□ 0.43
PRKN-207ENST00000479615 RAVER2Q9HCJ3 691 aaKnown RBP17.76■□□□□ 0.43
PRKN-207ENST00000479615 RBM27Q9P2N5 1060 aaKnown RBP17.76■□□□□ 0.43
PRKN-207ENST00000479615 PARP14Q460N5 1801 aa17.75■□□□□ 0.43
PRKN-207ENST00000479615 AKR1A1P14550 325 aa17.75■□□□□ 0.43
PRKN-207ENST00000479615 CWC27Q6UX04 472 aaKnown RBP17.75■□□□□ 0.43
PRKN-207ENST00000479615 DSCC1Q9BVC3 393 aa17.75■□□□□ 0.43
PRKN-207ENST00000479615 SENP6Q9GZR1 1112 aaPredicted RBP17.75■□□□□ 0.43
PRKN-207ENST00000479615 ACAD9Q9H845 621 aa17.75■□□□□ 0.43
PRKN-207ENST00000479615 INCENPQ9NQS7 918 aa17.75■□□□□ 0.43
PRKN-207ENST00000479615 RIPK3Q9Y572 518 aa17.75■□□□□ 0.43
PRKN-207ENST00000479615 FXR1P51114 621 aaKnown RBP eCLIP17.74■□□□□ 0.43
PRKN-207ENST00000479615 RNF180Q86T96 592 aa17.74■□□□□ 0.43
PRKN-207ENST00000479615 NMT2O60551 498 aa17.73■□□□□ 0.43
PRKN-207ENST00000479615 SLC4A3P48751 1232 aa17.73■□□□□ 0.43
PRKN-207ENST00000479615 IMMTQ16891 758 aaKnown RBP17.73■□□□□ 0.43
PRKN-207ENST00000479615 PRAMEF19Q5SWL8 479 aa17.73■□□□□ 0.43
PRKN-207ENST00000479615 BTNL9Q6UXG8 535 aa17.73■□□□□ 0.43
PRKN-207ENST00000479615 IQCA1Q86XH1 822 aa17.73■□□□□ 0.43
PRKN-207ENST00000479615 DGKHQ86XP1 1220 aa17.73■□□□□ 0.43
PRKN-207ENST00000479615 TMEM47Q9BQJ4 181 aa17.73■□□□□ 0.43
PRKN-207ENST00000479615 ABHD16BQ9H3Z7 469 aa17.73■□□□□ 0.43
PRKN-207ENST00000479615 XPNPEP3Q9NQH7 507 aa17.73■□□□□ 0.43
PRKN-207ENST00000479615 FAM184BQ9ULE4 1060 aa17.73■□□□□ 0.43
PRKN-207ENST00000479615 PRR12Q9ULL5 1215 aa17.73■□□□□ 0.43
PRKN-207ENST00000479615 MYH4Q9Y623 1939 aa17.72■□□□□ 0.43
PRKN-207ENST00000479615 ZNF865P0CJ78 1059 aaPredicted RBP17.72■□□□□ 0.43
PRKN-207ENST00000479615 HAND2P61296 217 aa17.72■□□□□ 0.43
PRKN-207ENST00000479615 LRRC26Q2I0M4 334 aa17.72■□□□□ 0.43
PRKN-207ENST00000479615 CCDC96Q2M329 555 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms