RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 KLHL25Q9H0H3 589 aa6.79□□□□□ -1.32
SSR1-207ENST00000479485 DUSP15Q9H1R2 295 aaPredicted RBP6.79□□□□□ -1.32
SSR1-207ENST00000479485 TRIT1Q9H3H1 467 aaKnown RBP6.79□□□□□ -1.32
SSR1-207ENST00000479485 GP6Q9HCN6 339 aa6.79□□□□□ -1.32
SSR1-207ENST00000479485 ATP13A1Q9HD20 1204 aa6.79□□□□□ -1.32
SSR1-207ENST00000479485 GPATCH2Q9NW75 528 aa6.79□□□□□ -1.32
SSR1-207ENST00000479485 ZSWIM5Q9P217 1185 aa6.79□□□□□ -1.32
SSR1-207ENST00000479485 MINPP1Q9UNW1 487 aa6.79□□□□□ -1.32
SSR1-207ENST00000479485 ZNF451Q9Y4E5 1061 aa6.79□□□□□ -1.32
SSR1-207ENST00000479485 MEIS1O00470 390 aa6.78□□□□□ -1.32
SSR1-207ENST00000479485 CD247P20963 164 aa6.78□□□□□ -1.32
SSR1-207ENST00000479485 BNIP3Q12983 259 aa6.78□□□□□ -1.32
SSR1-207ENST00000479485 ANKRD39Q53RE8 183 aa6.78□□□□□ -1.32
SSR1-207ENST00000479485 ZNF574Q6ZN55 896 aaPredicted RBP6.78□□□□□ -1.32
SSR1-207ENST00000479485 WFDC3Q8IUB2 231 aa6.78□□□□□ -1.32
SSR1-207ENST00000479485 STK11IPQ8N1F8 1099 aa6.78□□□□□ -1.32
SSR1-207ENST00000479485 ASB11Q8WXH4 323 aa6.78□□□□□ -1.32
SSR1-207ENST00000479485 FGD4Q96M96 766 aa6.78□□□□□ -1.32
SSR1-207ENST00000479485 SUSD2Q9UGT4 822 aa6.78□□□□□ -1.32
SSR1-207ENST00000479485 VAV3Q9UKW4 847 aa6.78□□□□□ -1.32
SSR1-207ENST00000479485 SLC5A6Q9Y289 635 aa6.78□□□□□ -1.32
SSR1-207ENST00000479485 CCDC85CA6NKD9 419 aa6.77□□□□□ -1.33
SSR1-207ENST00000479485 FARP2O94887 1054 aaPredicted RBP6.77□□□□□ -1.33
SSR1-207ENST00000479485 ITGA4P13612 1032 aa6.77□□□□□ -1.33
SSR1-207ENST00000479485 TPP2P29144 1249 aaPredicted RBP6.77□□□□□ -1.33
SSR1-207ENST00000479485 IKZF1Q13422 519 aa6.77□□□□□ -1.33
SSR1-207ENST00000479485 PKN1Q16512 942 aa6.77□□□□□ -1.33
SSR1-207ENST00000479485 TSPYL5Q86VY4 417 aaPredicted RBP6.77□□□□□ -1.33
SSR1-207ENST00000479485 FLCNQ8NFG4 579 aa6.77□□□□□ -1.33
SSR1-207ENST00000479485 ADCY4Q8NFM4 1077 aa6.77□□□□□ -1.33
SSR1-207ENST00000479485 BRF1Q92994 677 aa6.77□□□□□ -1.33
SSR1-207ENST00000479485 GBP3Q9H0R5 595 aa6.77□□□□□ -1.33
SSR1-207ENST00000479485 CHST7Q9NS84 486 aa6.77□□□□□ -1.33
SSR1-207ENST00000479485 APEX2Q9UBZ4 518 aa6.77□□□□□ -1.33
SSR1-207ENST00000479485 ANKRD34BA5PLL1 514 aa6.76□□□□□ -1.33
SSR1-207ENST00000479485 SUSD5O60279 629 aa6.76□□□□□ -1.33
SSR1-207ENST00000479485 ZNF445P59923 1031 aa6.76□□□□□ -1.33
SSR1-207ENST00000479485 TCEAL1Q15170 157 aa6.76□□□□□ -1.33
SSR1-207ENST00000479485 NOL9Q5SY16 702 aaKnown RBP6.76□□□□□ -1.33
SSR1-207ENST00000479485 SOGA3Q5TF21 947 aa6.76□□□□□ -1.33
SSR1-207ENST00000479485 CILP2Q8IUL8 1156 aa6.76□□□□□ -1.33
SSR1-207ENST00000479485 SYTL5Q8TDW5 730 aaPredicted RBP6.76□□□□□ -1.33
SSR1-207ENST00000479485 DSCC1Q9BVC3 393 aa6.76□□□□□ -1.33
SSR1-207ENST00000479485 OSBPL2Q9H1P3 480 aa6.76□□□□□ -1.33
SSR1-207ENST00000479485 NOL6Q9H6R4 1146 aaKnown RBP6.76□□□□□ -1.33
SSR1-207ENST00000479485 PRR13Q9NZ81 148 aa6.76□□□□□ -1.33
SSR1-207ENST00000479485 SIRPGQ9P1W8 387 aa6.76□□□□□ -1.33
SSR1-207ENST00000479485 WHRNQ9P202 907 aa6.76□□□□□ -1.33
SSR1-207ENST00000479485 DUSP13Q9UII6 198 aa6.76□□□□□ -1.33
SSR1-207ENST00000479485 MSRB2Q9Y3D2 182 aa6.76□□□□□ -1.33
SSR1-207ENST00000479485 IGSF3O75054 1194 aa6.75□□□□□ -1.33
SSR1-207ENST00000479485 CD8BP10966 210 aa6.75□□□□□ -1.33
SSR1-207ENST00000479485 NAT2P11245 290 aa6.75□□□□□ -1.33
SSR1-207ENST00000479485 LTKP29376 864 aa6.75□□□□□ -1.33
SSR1-207ENST00000479485 RASA3Q14644 834 aa6.75□□□□□ -1.33
SSR1-207ENST00000479485 GAB4Q2WGN9 574 aa6.75□□□□□ -1.33
SSR1-207ENST00000479485 ANGEL2Q5VTE6 544 aaKnown RBP6.75□□□□□ -1.33
SSR1-207ENST00000479485 CRTC3Q6UUV7 619 aa6.75□□□□□ -1.33
SSR1-207ENST00000479485 EEPD1Q7L9B9 569 aa6.75□□□□□ -1.33
SSR1-207ENST00000479485 TMPRSS7Q7RTY8 843 aa6.75□□□□□ -1.33
SSR1-207ENST00000479485 SPRED2Q7Z698 418 aa6.75□□□□□ -1.33
SSR1-207ENST00000479485 ADAT2Q7Z6V5 191 aaKnown RBP6.75□□□□□ -1.33
SSR1-207ENST00000479485 FIBCD1Q8N539 461 aa6.75□□□□□ -1.33
SSR1-207ENST00000479485 DAGLBQ8NCG7 672 aa6.75□□□□□ -1.33
SSR1-207ENST00000479485 ENOX1Q8TC92 643 aaKnown RBP6.75□□□□□ -1.33
SSR1-207ENST00000479485 TCTN2Q96GX1 697 aa6.75□□□□□ -1.33
SSR1-207ENST00000479485 LNPKQ9C0E8 428 aa6.75□□□□□ -1.33
SSR1-207ENST00000479485 SUGT1Q9Y2Z0 365 aa6.75□□□□□ -1.33
SSR1-207ENST00000479485 FHOD1Q9Y613 1164 aa6.75□□□□□ -1.33
SSR1-207ENST00000479485 H0Y8X5 98 aa6.74□□□□□ -1.33
SSR1-207ENST00000479485 ESR1P03372 595 aa6.74□□□□□ -1.33
SSR1-207ENST00000479485 CTSKP43235 329 aa6.74□□□□□ -1.33
SSR1-207ENST00000479485 ZNF143P52747 638 aaPredicted RBP6.74□□□□□ -1.33
SSR1-207ENST00000479485 SLC10A6Q3KNW5 377 aa6.74□□□□□ -1.33
SSR1-207ENST00000479485 CREG2Q8IUH2 290 aa6.74□□□□□ -1.33
SSR1-207ENST00000479485 ZNF655Q8N720 491 aaPredicted RBP6.74□□□□□ -1.33
SSR1-207ENST00000479485 PPP1R14AQ96A00 147 aa6.74□□□□□ -1.33
SSR1-207ENST00000479485 PAK6Q9NQU5 681 aaPredicted RBP6.74□□□□□ -1.33
SSR1-207ENST00000479485 SNTG2Q9NY99 539 aa6.74□□□□□ -1.33
SSR1-207ENST00000479485 PCDHA11Q9Y5I1 949 aa6.74□□□□□ -1.33
SSR1-207ENST00000479485 PPM1BO75688 479 aa6.73□□□□□ -1.33
SSR1-207ENST00000479485 BMS1Q14692 1282 aaKnown RBP6.73□□□□□ -1.33
SSR1-207ENST00000479485 PPP2R5DQ14738 602 aa6.73□□□□□ -1.33
SSR1-207ENST00000479485 ZNF513Q8N8E2 541 aaPredicted RBP6.73□□□□□ -1.33
SSR1-207ENST00000479485 ZDHHC15Q96MV8 337 aa6.73□□□□□ -1.33
SSR1-207ENST00000479485 DEPDC7Q96QD5 511 aa6.73□□□□□ -1.33
SSR1-207ENST00000479485 APBA2Q99767 749 aa6.73□□□□□ -1.33
SSR1-207ENST00000479485 CARS2Q9HA77 564 aaKnown RBP6.73□□□□□ -1.33
SSR1-207ENST00000479485 CGGBP1Q9UFW8 167 aaPredicted RBP6.73□□□□□ -1.33
SSR1-207ENST00000479485 PDPK1O15530 556 aa6.72□□□□□ -1.33
SSR1-207ENST00000479485 ZP2Q05996 745 aa6.72□□□□□ -1.33
SSR1-207ENST00000479485 EGR3Q06889 387 aa6.72□□□□□ -1.33
SSR1-207ENST00000479485 SV2CQ496J9 727 aa6.72□□□□□ -1.33
SSR1-207ENST00000479485 DPH6Q7L8W6 267 aa6.72□□□□□ -1.33
SSR1-207ENST00000479485 KSR1Q8IVT5 923 aa6.72□□□□□ -1.33
SSR1-207ENST00000479485 SRPK1Q96SB4 655 aaKnown RBP6.72□□□□□ -1.33
SSR1-207ENST00000479485 LGR4Q9BXB1 951 aa6.72□□□□□ -1.33
SSR1-207ENST00000479485 FOXP3Q9BZS1 431 aa6.72□□□□□ -1.33
SSR1-207ENST00000479485 ZSWIM4Q9H7M6 989 aa6.72□□□□□ -1.33
SSR1-207ENST00000479485 SF3B6Q9Y3B4 125 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms